Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 2.9e-181 639.0 483 100.0
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 1.2e-54 218.4 324 83.6
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.0e-53 213.8 324 81.2
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 7.1e-47 192.6 327 80.4
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 2.1e-46 191.0 321 67.3
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 2.1e-46 191.0 317 79.8
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 2.1e-46 191.0 319 82.1
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 2.1e-46 191.0 330 80.6
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 2.7e-46 190.7 318 80.8
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 7.8e-46 189.1 328 78.7
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 8.7e-45 185.7 331 80.1
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 1.1e-44 185.3 325 68.3
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 1.9e-44 184.5 328 79.6
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 7.3e-44 182.6 326 80.1
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 2.1e-43 181.0 319 75.5
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 2.1e-43 181.0 329 78.4
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 4.8e-43 179.9 318 81.4
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 4.8e-43 179.9 324 77.8
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 8.1e-43 179.1 323 77.1
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 2.4e-42 177.6 328 72.6
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 3.1e-42 177.2 326 77.0
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 3.1e-42 177.2 327 78.3
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 5.3e-42 176.4 325 78.8
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 6.9e-42 176.0 328 72.0
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 6.9e-42 176.0 325 78.8
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 6.9e-42 176.0 324 76.2
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 9.0e-42 175.6 325 78.5
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 1.2e-41 175.3 324 77.2
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 2.0e-41 174.5 319 76.5
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 2.0e-41 174.5 324 77.2
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 3.4e-41 173.7 326 76.4
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 3.4e-41 173.7 328 78.0
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 3.4e-41 173.7 320 77.5
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 4.5e-41 173.3 328 76.8
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 5.8e-41 172.9 324 78.7
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.7e-40 171.4 323 77.7
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 1.7e-40 171.4 324 75.3
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.7e-40 171.4 316 79.7
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 8.4e-40 169.1 329 76.0
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 8.4e-40 169.1 327 77.1
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 1.4e-39 168.3 327 77.1
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 1.4e-39 168.3 326 77.3
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 1.9e-39 167.9 327 76.8
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 2.7e-38 164.1 327 45.9
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 1.8e-37 161.4 320 75.9
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 3.9e-37 160.2 326 74.8
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 6.7e-37 159.5 316 77.2
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 1.9e-36 157.9 324 75.6
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 2.5e-36 157.5 320 73.8
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 2.5e-36 157.5 328 70.1
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 4.3e-36 156.8 327 76.1
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 5.6e-36 156.4 328 71.3
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 9.6e-36 155.6 328 76.8
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 2.1e-35 154.5 328 72.3
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 3.7e-35 153.7 328 74.4
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 3.7e-35 153.7 328 74.4
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 3.7e-35 153.7 320 75.3
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 6.2e-35 152.9 310 77.4
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 8.1e-35 152.5 327 76.1
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 1.1e-34 152.1 320 75.6
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.8e-34 151.4 320 75.3
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 1.8e-34 151.4 320 75.3
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 4.0e-34 150.2 319 77.4
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 5.3e-34 149.8 318 77.4
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 6.9e-34 149.4 327 75.5
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 1.5e-33 148.3 319 76.2
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 2.0e-33 147.9 324 75.6
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 1.0e-32 145.6 326 66.9
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 1.7e-32 144.8 326 71.2
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 2.2e-32 144.4 324 72.5
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 2.9e-32 144.1 328 73.8
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 2.9e-32 144.1 361 62.6
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 1.4e-31 141.7 313 78.0
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 3.2e-31 140.6 328 73.5
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 4.2e-31 140.2 318 73.0
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 5.5e-31 139.8 328 73.5
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 5.5e-31 139.8 318 72.3
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 9.3e-31 139.0 318 72.0
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 1.2e-30 138.7 326 61.7
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 1.6e-30 138.3 324 73.1
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 4.6e-30 136.7 318 72.6
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 1.0e-29 135.6 326 72.1
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 5.1e-29 133.3 324 61.4
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.1e-28 132.1 322 66.1
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 2.5e-28 131.0 324 67.3
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 2.5e-28 131.0 297 79.5
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 7.4e-28 129.4 90 67.8
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 9.6e-28 129.0 319 60.8
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.3e-27 128.6 324 62.3
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 2.1e-27 127.9 318 61.0
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 2.8e-27 127.5 324 71.6
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 6.2e-27 126.3 324 67.0
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 6.2e-27 126.3 324 67.0
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 1.8e-26 124.8 324 67.0
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 3.1e-26 124.0 324 66.7
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.1e-26 124.0 80 73.8
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 6.9e-26 122.9 320 69.4
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 1.2e-25 122.1 321 60.4
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 1.5e-25 121.7 78 69.2
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 2.2e-24 117.9 75 65.3
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 1.4e-23 115.2 278 79.5
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 3.2e-23 114.0 87 60.9
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.2e-23 114.0 66 75.8
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 7.9e-22 109.4 314 53.2
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 1.0e-21 109.0 94 56.4
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 1.9e-20 104.8 318 40.6
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 2.9e-16 90.9 315 55.2
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.8e-16 90.5 58 70.7
TAR381G1325 Trochodendron aralioides HOM05D006835 ORTHO05D008587 6.1e-14 83.2 56 67.9
SEGI_34779 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 7.9e-14 82.8 56 64.3
HPP92_022026 Vanilla planifolia HOM05D006835 ORTHO05D008587 9.7e-12 75.9 58 58.6
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 3.1e-10 70.9 83 42.2
vmacro17002 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 4.5e-09 67.0 89 44.9
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 5.9e-09 66.6 74 41.9
SEGI_18890 Sequoiadendron giganteum HOM05D006835 ORTHO05D008587 2.2e-08 64.7 68 51.5


User provided reference genes

Program Settings