Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00618 Erythranthe guttata HOM05D006564 ORTHO05D007772 1.1e-36 156.0 75 100.0
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.7e-35 151.0 72 100.0
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 6.3e-19 97.1 83 59.0
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 2.2e-16 88.6 75 60.0
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 6.5e-16 87.0 72 55.6
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 6.5e-16 87.0 74 56.8
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.1e-15 86.3 72 55.6
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 1.5e-15 85.9 77 57.1
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.9e-15 85.5 72 55.6
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 3.2e-15 84.7 76 56.6
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 5.5e-15 84.0 76 56.6
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 1.6e-14 82.4 67 56.7
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 3.6e-14 81.3 76 53.9
HanXRQChr12g0383591 Helianthus annuus HOM05D006564 ORTHO05D007772 4.7e-14 80.9 73 54.8
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 6.1e-14 80.5 74 51.4
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 8.0e-14 80.1 74 55.4
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 8.0e-14 80.1 76 52.6
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 8.0e-14 80.1 61 62.3
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 8.0e-14 80.1 76 53.9
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 1.4e-13 79.3 77 53.2
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 1.8e-13 79.0 74 54.1
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 2.3e-13 78.6 72 52.8
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 5.2e-13 77.4 74 52.7
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 1.5e-12 75.9 72 52.8
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 2.6e-12 75.1 72 47.2
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 3.4e-12 74.7 77 48.1
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 3.4e-12 74.7 76 53.9
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 4.4e-12 74.3 76 51.3
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 4.4e-12 74.3 60 63.3
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 9.7e-12 73.2 76 48.7
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 1.3e-11 72.8 72 47.2
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 1.3e-11 72.8 72 48.6
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 2.2e-11 72.0 64 54.7
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 2.2e-11 72.0 88 46.6
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 4.8e-11 70.9 65 58.5
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 6.3e-11 70.5 64 54.7
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 1.1e-10 69.7 70 50.0
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 1.1e-10 69.7 70 50.0
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 1.1e-10 69.7 64 54.7
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 1.1e-10 69.7 73 50.7
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.4e-10 69.3 76 53.9
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 1.4e-10 69.3 76 53.9
Gohir.1Z049603 Gossypium hirsutum HOM05D006564 ORTHO05D007772 3.1e-10 68.2 48 62.5
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 3.1e-10 68.2 77 50.6
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 7.0e-10 67.0 71 47.9
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 9.1e-10 66.6 65 52.3
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 4.5e-09 64.3 76 42.1
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 5.9e-09 63.9 78 46.2
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 2.9e-08 61.6 66 53.0
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 3.8e-08 61.2 45 64.4
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 5.0e-08 60.8 76 52.6
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 5.0e-08 60.8 85 45.9
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 8.5e-08 60.1 66 50.0
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 8.5e-08 60.1 66 50.0
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 8.5e-08 60.1 53 56.6
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 1.9e-07 58.9 66 48.5
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 2.5e-07 58.5 53 56.6
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 2.5e-07 58.5 53 56.6
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 2.5e-07 58.5 53 54.7
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 3.2e-07 58.2 62 51.6
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 3.2e-07 58.2 64 50.0
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 4.2e-07 57.8 78 44.9
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 5.5e-07 57.4 72 44.4
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 5.5e-07 57.4 74 40.5
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 9.4e-07 56.6 54 53.7
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 9.4e-07 56.6 54 53.7
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 9.4e-07 56.6 73 43.8
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.2e-06 56.2 64 50.0
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 2.1e-06 55.5 55 50.9
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.1e-06 55.5 60 51.7
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 3.6e-06 54.7 52 53.8


User provided reference genes

Program Settings