Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 0.0e+00 1243.8 708 100.0
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 2.0e-239 832.8 695 73.4
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 1.7e-227 793.1 706 68.1
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 8.7e-195 684.5 633 67.5
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 2.4e-192 676.4 706 60.6
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 5.3e-192 675.2 705 59.9
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 1.3e-190 670.6 705 61.4
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 9.3e-189 664.5 706 61.6
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 2.5e-186 656.4 706 62.5
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 2.8e-185 652.9 707 59.1
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 3.7e-185 652.5 704 61.2
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 4.5e-183 645.6 522 74.9
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 2.2e-182 643.3 705 59.0
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 6.5e-182 641.7 707 55.3
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 3.6e-180 636.0 706 55.4
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 4.6e-180 635.6 706 58.1
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 3.0e-179 632.9 705 59.9
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 6.5e-174 615.1 709 54.6
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 2.1e-172 610.1 705 56.7
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 7.9e-172 608.2 704 51.8
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 1.8e-168 597.0 706 57.9
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 1.3e-166 590.9 704 52.4
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 2.2e-166 590.1 705 58.3
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 5.0e-166 589.0 704 57.2
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 3.2e-165 586.3 708 58.1
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 5.5e-165 585.5 706 57.8
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 7.2e-165 585.1 706 55.2
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 7.2e-165 585.1 705 58.2
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 2.1e-164 583.6 705 57.9
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 8.0e-164 581.6 705 57.9
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 8.0e-164 581.6 705 57.9
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 8.0e-164 581.6 708 58.1
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 1.0e-163 581.3 709 55.4
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 3.0e-163 579.7 708 57.9
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.5e-162 577.4 706 55.2
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 1.5e-162 577.4 704 54.3
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 3.3e-162 576.2 705 57.6
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 1.1e-160 571.2 705 55.3
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 1.8e-160 570.5 708 50.0
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 3.5e-159 566.2 704 56.1
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 1.0e-158 564.7 706 54.7
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 2.9e-158 563.1 704 55.0
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 3.8e-158 562.8 705 54.5
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 3.6e-156 556.2 706 55.7
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 8.0e-156 555.1 767 41.6
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 1.2e-154 551.2 705 52.1
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 2.0e-154 550.4 634 62.3
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 2.0e-154 550.4 707 56.3
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 5.7e-154 548.9 671 55.7
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.7e-153 547.4 757 47.2
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 3.5e-151 539.7 705 54.6
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 7.7e-151 538.5 705 47.1
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 1.5e-149 534.3 709 53.9
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 1.9e-149 533.9 717 50.2
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 2.5e-149 533.5 729 50.5
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 9.5e-149 531.6 704 52.0
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 4.7e-148 529.3 718 51.5
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 4.7e-148 529.3 710 53.9
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 6.8e-147 525.4 705 47.2
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 1.5e-146 524.2 705 54.5
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 2.6e-146 523.5 742 48.9
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 4.4e-146 522.7 707 54.3
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 7.5e-146 521.9 707 54.0
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 6.3e-145 518.8 705 53.5
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 1.4e-144 517.7 705 53.6
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 1.8e-144 517.3 705 51.9
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 7.0e-144 515.4 704 52.3
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 2.7e-143 513.5 705 49.1
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 2.9e-142 510.0 711 53.4
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 2.9e-142 510.0 736 51.1
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 1.9e-141 507.3 707 52.1
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.5e-141 506.9 707 53.3
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 2.3e-139 500.4 710 53.5
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 8.9e-139 498.4 707 50.6
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 2.0e-138 497.3 724 48.3
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 1.3e-137 494.6 705 49.4
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 2.9e-137 493.4 705 51.5
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 6.4e-137 492.3 711 51.6
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 1.4e-136 491.1 711 51.3
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 1.4e-136 491.1 707 53.7
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 1.4e-136 491.1 707 52.3
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 4.1e-136 489.6 708 53.1
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 4.1e-136 489.6 706 51.8
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 9.2e-136 488.4 710 53.7
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 1.6e-135 487.6 712 51.5
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 1.6e-135 487.6 706 49.2
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 1.0e-134 485.0 711 51.9
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 2.3e-134 483.8 708 51.7
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 2.3e-134 483.8 705 53.2
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 3.0e-134 483.4 710 51.1
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 5.0e-134 482.6 710 50.8
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 2.5e-133 480.3 711 51.5
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 2.1e-132 477.2 660 55.6
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 2.1e-132 477.2 635 53.9
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 6.2e-132 475.7 735 48.7
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 3.7e-129 466.5 705 49.5
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 7.0e-128 462.2 718 50.1
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 1.2e-127 461.5 707 51.3
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 1.2e-119 434.9 715 40.4
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 1.1e-117 428.3 714 43.8
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.3e-117 426.8 521 49.7
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 5.6e-117 426.0 708 38.7
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 8.9e-115 418.7 520 54.6
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 8.4e-113 412.1 714 39.9
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 8.4e-113 412.1 707 39.6
AUR62037113 Chenopodium quinoa HOM05D003682 ORTHO05D004224 3.9e-110 403.3 533 43.5
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 1.9e-109 401.0 710 44.6
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 3.6e-108 396.7 585 50.6
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 4.0e-107 393.3 713 46.4
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 2.6e-106 390.6 708 37.7
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 4.2e-104 383.3 712 38.3
AT5G41820 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 5.4e-104 382.9 726 40.6
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 1.1e-101 375.2 471 58.8
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.2e-97 360.9 728 36.7
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 1.6e-92 344.7 520 49.2
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 1.4e-91 341.7 658 48.2
SHI09562 Sapria himalayana HOM05D003682 ORTHO05D000023 5.5e-80 303.1 533 41.3
GSVIVG01009191001 Vitis vinifera HOM05D003682 ORTHO05D004224 1.1e-75 288.9 307 56.0
HanXRQChr08g0233491 Helianthus annuus HOM05D003682 ORTHO05D004224 9.0e-75 285.8 426 53.3
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 1.4e-72 278.5 463 43.0
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 4.6e-71 273.5 733 40.7
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 7.9e-71 272.7 532 35.2
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 1.8e-67 261.5 272 62.1
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.3e-65 255.4 481 36.2
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.8e-65 253.8 480 35.2
Glyma.02G123302 Glycine max HOM05D003682 ORTHO05D004224 3.8e-57 227.3 357 40.1
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 3.2e-56 224.2 254 58.7
SEGI_17476 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 3.2e-56 224.2 426 35.4
Lalb_Chr04g0252801 Lupinus albus HOM05D003682 ORTHO05D004224 4.2e-56 223.8 259 62.2
GSVIVG01009190001 Vitis vinifera HOM05D003682 ORTHO05D004224 1.4e-54 218.8 256 68.8
SalBow4G1793 Salvia bowleyana HOM05D003682 ORTHO05D004224 1.8e-51 208.4 190 70.0
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 1.3e-41 175.6 738 29.9
Cpa.g.c39765 Carica papaya HOM05D003682 ORTHO05D004224 1.1e-40 172.6 188 51.6
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 5.5e-40 170.2 124 67.7
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 3.4e-37 161.0 240 38.3
unitig_0.g156 Utricularia gibba HOM05D003682 ORTHO05D004224 1.1e-35 156.0 109 70.6
BcaNung04806 Brassica carinata HOM05D003682 ORTHO05D004224 5.4e-35 153.7 124 61.3
Actinidia36899 Actinidia chinensis HOM05D003682 ORTHO05D004224 5.2e-30 137.1 137 66.4
HanXRQChr08g0233481 Helianthus annuus HOM05D003682 ORTHO05D004224 8.9e-30 136.3 139 66.2
Pp3c1_10430 Physcomitrium patens HOM05D003682 ORTHO05D004224 8.9e-30 136.3 520 30.0
Cpa.g.c34457.1 Carica papaya HOM05D003682 ORTHO05D004224 1.5e-29 135.6 134 58.2
SEGI_24080 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 2.0e-29 135.2 124 54.8
SHI09561 Sapria himalayana HOM05D000105 ORTHO05D000023 6.3e-28 130.2 124 56.5
HPP92_013470 Vanilla planifolia HOM05D003682 ORTHO05D004224 1.2e-26 125.9 202 51.0
SMO307G0051 Selaginella moellendorffii HOM05D003682 ORTHO05D004224 1.5e-24 119.0 124 48.4
CSS0023594 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.3e-24 117.9 98 61.2
Dinv42603 Davidia involucrata HOM05D003682 ORTHO05D004224 1.4e-22 112.5 130 45.4
CSS0005132 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.5e-21 109.0 97 58.8
BcaB06g27567 Brassica carinata HOM05D003682 ORTHO05D004224 4.4e-21 107.5 112 51.8
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 9.2e-19 99.8 145 39.3
EL10Ac3g05976 Beta vulgaris HOM05D003682 ORTHO05D004224 1.9e-16 92.0 71 60.6
Aqoxy2G00859 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 5.6e-16 90.5 98 41.8
CSS0014234 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 8.0e-15 86.7 96 42.7
MCO12G062 Micromonas commoda HOM05D003682 ORTHO05D004224 1.5e-13 82.4 282 28.4
Cre07.g339350 Chlamydomonas reinhardtii HOM05D003682 ORTHO05D004224 3.4e-13 81.3 126 39.7
Psat5g049320 Pisum sativum HOM05D003682 ORTHO05D004224 3.4e-13 81.3 161 34.2
CSS0003380 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 5.8e-13 80.5 96 40.6
CSS0026243 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.2e-12 78.6 96 39.6
CSS0040590 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.2e-12 78.6 96 39.6
PRCOL_00003254 Prasinoderma coloniale HOM05D003682 ORTHO05D004224 6.4e-12 77.0 260 25.4
PGR102G2117 Punica granatum HOM05D003682 ORTHO05D004224 6.4e-12 77.0 260 24.6
CSS0029499 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.4e-11 75.9 58 65.5
CSS0045772 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.9e-11 75.5 60 63.3
Lalb_Chr04g0252781 Lupinus albus HOM05D003682 ORTHO05D004224 2.4e-11 75.1 74 54.1
Lsat_1_v5_gn_3_58200 Lactuca sativa HOM05D003682 ORTHO05D004224 1.6e-10 72.4 77 53.2
CSS0020196 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.0e-10 72.0 58 63.8
CSS0037747 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.0e-10 72.0 58 63.8
CSS0029631 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.7e-10 71.6 58 62.1
CSS0037736 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.5e-10 71.2 58 62.1
CSS0042448 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.6e-10 70.9 96 36.5
CSS0000677 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.9e-09 67.8 96 37.5
CAN.G475.12 Capsicum annuum HOM05D003682 ORTHO05D004224 3.9e-09 67.8 55 56.4
CSS0029231 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.9e-08 65.5 95 36.8
arahy.Tifrunner.gnm1.ann1.R6K80C Arachis hypogaea HOM05D003682 ORTHO05D004224 3.3e-08 64.7 144 37.5
CSS0006921 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 4.3e-08 64.3 96 34.4
arahy.Tifrunner.gnm1.ann1.H7L4UV Arachis hypogaea HOM05D003682 ORTHO05D004224 5.6e-08 63.9 134 38.8
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 1.8e-06 58.9 28 85.7
TAR628G0387 Trochodendron aralioides HOM05D003682 ORTHO05D004224 4.0e-06 57.8 43 53.5


User provided reference genes

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