Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00960 Erythranthe guttata HOM05D006705 ORTHO05D008179 2.7e-169 599.7 312 100.0
MSTRG.1107 Avicennia marina HOM05D006705 ORTHO05D008179 8.1e-137 491.9 310 81.9
SalBow7G0522 Salvia bowleyana HOM05D006705 ORTHO05D008179 4.3e-130 469.5 311 80.1
SGA_v2.0_scaffold108G30860 Striga asiatica HOM05D006705 ORTHO05D008179 8.7e-115 418.7 296 73.6
Oeu007482.1 Olea europaea HOM05D006705 ORTHO05D008179 4.3e-114 416.4 328 68.9
Nitab4.5_0000337g0230 Nicotiana tabacum HOM05D006705 ORTHO05D008179 1.4e-109 401.4 318 68.2
Nitab4.5_0025577g0010 Nicotiana tabacum HOM05D006705 ORTHO05D008179 2.7e-108 397.1 318 67.9
PGSC0003DMG400011663 Solanum tuberosum HOM05D006705 ORTHO05D008179 9.0e-104 382.1 312 66.7
CAN.G985.2 Capsicum annuum HOM05D006705 ORTHO05D008179 1.2e-103 381.7 314 66.9
Cc10_g00680 Coffea canephora HOM05D006705 ORTHO05D008179 1.2e-103 381.7 319 64.6
Actinidia15490 Actinidia chinensis HOM05D006705 ORTHO05D008179 2.2e-102 377.5 318 65.1
Rhsim06G0007500 Rhododendron simsii HOM05D006705 ORTHO05D008179 3.2e-101 373.6 278 70.5
Peaxi162Scf00400g00113 Petunia axillaris HOM05D006705 ORTHO05D008179 2.7e-100 370.5 319 63.3
Dinv05535 Davidia involucrata HOM05D006705 ORTHO05D008179 4.6e-100 369.8 316 63.6
CSS0004504 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 2.1e-97 360.9 317 63.4
CSS0019684 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 8.2e-97 359.0 314 63.1
Lsat_1_v5_gn_9_45140 Lactuca sativa HOM05D006705 ORTHO05D008179 8.2e-97 359.0 329 59.3
Hma1.2p1_0507F.1_g168450 Hydrangea macrophylla HOM05D006705 ORTHO05D008179 9.0e-96 355.5 260 69.6
Solyc08g045850.3 Solanum lycopersicum HOM05D006705 ORTHO05D008179 9.0e-96 355.5 297 65.7
Nn5g30939 Nelumbo nucifera HOM05D006705 ORTHO05D008179 2.0e-95 354.4 292 64.7
CsaV3_6G031600 Cucumis sativus L. HOM05D006705 ORTHO05D008179 1.7e-94 351.3 344 55.8
Sopen08g014170 Solanum pennellii HOM05D006705 ORTHO05D008179 1.7e-94 351.3 299 65.9
Sed0011006 Sechium edule HOM05D006705 ORTHO05D008179 3.8e-94 350.1 315 60.6
vmacro21812 Vaccinium macrocarpon HOM05D006705 ORTHO05D008179 3.8e-94 350.1 320 61.2
TAR376G0550 Trochodendron aralioides HOM05D006705 ORTHO05D008179 4.9e-94 349.7 258 69.4
MELO3C026541.2 Cucumis melo HOM05D006705 ORTHO05D008179 1.6e-92 344.7 344 55.8
ClCG08G009460 Citrullus lanatus HOM05D006705 ORTHO05D008179 3.5e-92 343.6 340 56.5
Gorai.002G117100 Gossypium raimondii HOM05D006705 ORTHO05D008179 4.6e-92 343.2 325 59.7
Gohir.D01G092000 Gossypium hirsutum HOM05D006705 ORTHO05D008179 6.1e-92 342.8 325 59.4
DCAR_013913 Daucus carota HOM05D006705 ORTHO05D008179 7.9e-92 342.4 306 62.1
RcHm_v2.0_Chr6g0304261 Rosa chinensis HOM05D006705 ORTHO05D008179 7.9e-92 342.4 319 58.6
Cpa.g.sc26.199 Carica papaya HOM05D006705 ORTHO05D008179 1.0e-91 342.0 331 57.4
Haze_22772 Corylus avellana HOM05D006705 ORTHO05D008179 3.0e-91 340.5 328 57.6
Cfa014075 Carpinus fangiana HOM05D006705 ORTHO05D008179 3.9e-91 340.1 328 57.3
Thecc.08G058800 Theobroma cacao HOM05D006705 ORTHO05D008179 6.7e-91 339.3 260 66.5
Gohir.A01G105700 Gossypium hirsutum HOM05D006705 ORTHO05D008179 2.5e-90 337.4 260 67.7
AUR62043173 Chenopodium quinoa HOM05D006705 ORTHO05D008179 4.3e-90 336.7 330 56.4
AUR62036875 Chenopodium quinoa HOM05D006705 ORTHO05D008179 1.6e-89 334.7 263 64.3
Manes.05G134500 Manihot esculenta HOM05D006705 ORTHO05D008179 4.8e-89 333.2 266 63.5
Ca_15434_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 6.3e-89 332.8 258 65.1
Ca_15459_v3 Cicer arietinum L. HOM05D006705 ORTHO05D008179 6.3e-89 332.8 258 65.1
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 6.3e-89 332.8 261 65.5
Ciclev10000451m.g Citrus clementina HOM05D006705 ORTHO05D008179 1.1e-88 332.0 255 67.1
PSO210G3824 Papaver somniferum HOM05D006705 ORTHO05D008179 1.1e-88 332.0 259 64.1
Sabra05G0193800 Salix brachista HOM05D006705 ORTHO05D008179 1.1e-88 332.0 329 57.4
PSO170G2138 Papaver somniferum HOM05D006705 ORTHO05D008179 1.4e-88 331.6 259 63.7
FAN27G0286 Fragaria x ananassa HOM05D006705 ORTHO05D008179 2.4e-88 330.9 317 58.7
Aqoxy5G01043 Aquilegia oxysepala HOM05D006705 ORTHO05D008179 9.0e-88 328.9 266 63.5
Lalb_Chr11g0061641 Lupinus albus HOM05D006705 ORTHO05D008179 9.0e-88 328.9 258 64.3
COL.COLO4_06661 Corchorus olitorius HOM05D006705 ORTHO05D008179 1.5e-87 328.2 331 56.5
Glyma.04G018000 Glycine max HOM05D006705 ORTHO05D008179 1.5e-87 328.2 262 64.9
HanXRQChr05g0146791 Helianthus annuus HOM05D006705 ORTHO05D008179 2.6e-87 327.4 246 68.3
Psat5g159080 Pisum sativum HOM05D006705 ORTHO05D008179 2.6e-87 327.4 263 63.9
Potri.005G250200 Populus trichocarpa HOM05D006705 ORTHO05D008179 2.6e-87 327.4 261 65.1
Glyma.06G018300 Glycine max HOM05D006705 ORTHO05D008179 3.4e-87 327.0 257 64.6
QL02p014030 Quercus lobata HOM05D006705 ORTHO05D008179 3.4e-87 327.0 252 66.7
Hund05113 Selenicereus undatus HOM05D006705 ORTHO05D008179 2.9e-86 323.9 322 56.8
GSVIVG01013362001 Vitis vinifera HOM05D006705 ORTHO05D008179 5.0e-86 323.2 302 59.6
Lsat_1_v5_gn_8_26180 Lactuca sativa HOM05D006705 ORTHO05D008179 1.1e-85 322.0 326 56.1
FAN15G2229 Fragaria x ananassa HOM05D006705 ORTHO05D008179 4.2e-85 320.1 305 58.7
arahy.Tifrunner.gnm1.ann1.A2XG10 Arachis hypogaea HOM05D006705 ORTHO05D008179 5.5e-85 319.7 239 67.4
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 7.2e-85 319.3 248 66.1
CARHR284920 Cardamine hirsuta HOM05D006705 ORTHO05D008179 9.4e-85 318.9 265 64.2
CDE02G1751 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 9.4e-85 318.9 238 68.1
FvH4_2g37460 Fragaria vesca HOM05D006705 ORTHO05D008179 9.4e-85 318.9 312 57.7
CANSAT25G1831 Cannabis sativa HOM05D006705 ORTHO05D008179 1.2e-84 318.5 257 64.6
Prupe.1G354600 Prunus persica HOM05D006705 ORTHO05D008179 7.9e-84 315.8 239 67.8
PGR031G2749 Punica granatum HOM05D006705 ORTHO05D008179 1.4e-83 315.1 328 54.6
THA.LOC104825423 Tarenaya hassleriana HOM05D006705 ORTHO05D008179 1.4e-83 315.1 268 61.9
VMungo1309G2580 Vigna mungo HOM05D006705 ORTHO05D008179 2.3e-83 314.3 244 65.2
arahy.Tifrunner.gnm1.ann1.1DQJ64 Arachis hypogaea HOM05D006705 ORTHO05D008179 3.0e-83 313.9 290 58.3
Aa31LG9G12430 Aethionema arabicum HOM05D006705 ORTHO05D008179 3.9e-83 313.5 251 65.7
CiPaw.08G072900 Carya illinoinensis HOM05D006705 ORTHO05D008179 3.9e-83 313.5 302 58.9
Medtr3g115270 Medicago truncatula HOM05D006705 ORTHO05D008179 6.7e-83 312.8 267 61.8
MD12G1003200 Malus domestica HOM05D006705 ORTHO05D008179 3.3e-82 310.5 264 61.7
Phvul.009G010700 Phaseolus vulgaris HOM05D006705 ORTHO05D008179 4.3e-82 310.1 244 64.8
EL10Ac1g01967 Beta vulgaris HOM05D006705 ORTHO05D008179 1.7e-81 308.1 292 57.9
HanXRQChr12g0367581 Helianthus annuus HOM05D006705 ORTHO05D008179 4.8e-81 306.6 302 57.9
TPR.G38137 Trifolium pratense HOM05D006705 ORTHO05D008179 1.1e-80 305.4 242 64.5
Lj1g0004605 Lotus japonicus HOM05D006705 ORTHO05D008179 1.8e-80 304.7 271 60.5
Thhalv10027665m.g Eutrema salsugineum HOM05D006705 ORTHO05D008179 3.1e-80 303.9 249 63.9
Sabra02G0008200 Salix brachista HOM05D006705 ORTHO05D008179 5.3e-80 303.1 256 60.2
A03p65890 Brassica napus HOM05D006705 ORTHO05D008179 3.4e-79 300.4 252 61.5
BraA03t15643Z Brassica rapa HOM05D006705 ORTHO05D008179 3.4e-79 300.4 252 61.5
Sc15g0004450 Simmondsia chinensis HOM05D006705 ORTHO05D008179 3.4e-79 300.4 316 54.1
Ah.11g041180 Amaranthus hybridus HOM05D006705 ORTHO05D008179 1.0e-78 298.9 300 57.0
Sp7g08260 Schrenkiella parvula HOM05D006705 ORTHO05D008179 2.9e-78 297.4 249 62.2
BcaC06g31759 Brassica carinata HOM05D006705 ORTHO05D008179 1.9e-77 294.7 235 64.7
AL8G19290 Arabidopsis lyrata HOM05D006705 ORTHO05D008179 2.5e-77 294.3 253 61.3
BcaC02g10761 Brassica carinata HOM05D006705 ORTHO05D008179 2.5e-77 294.3 252 61.9
C04p25410 Brassica napus HOM05D006705 ORTHO05D008179 2.5e-77 294.3 252 61.9
BolC4t24049H Brassica oleracea HOM05D006705 ORTHO05D008179 2.5e-77 294.3 252 61.9
AT5G42310 Arabidopsis thaliana HOM05D006705 ORTHO05D008179 5.5e-77 293.1 250 60.8
MD15G1002100 Malus domestica HOM05D006705 ORTHO05D008179 5.5e-77 293.1 239 63.6
Carub.0008s0687 Capsella rubella HOM05D006705 ORTHO05D008179 1.6e-76 291.6 250 61.2
ECA233G5787 Erigeron canadensis HOM05D006705 ORTHO05D008179 2.7e-76 290.8 323 51.4
Potri.002G010900 Populus trichocarpa HOM05D006705 ORTHO05D008179 2.3e-75 287.7 235 61.3
Lj4A11G70 Lonicera japonica HOM05D006705 ORTHO05D008179 7.0e-72 276.2 175 78.3
CDE04G2934 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 5.9e-71 273.1 255 57.3
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 1.1e-53 215.7 170 65.3
Eucgr.F03553 Eucalyptus grandis HOM05D006705 ORTHO05D008179 1.0e-51 209.1 168 66.7
MBI08_g41522_MAGBIO Magnolia biondii HOM05D006705 ORTHO05D008179 2.6e-50 204.5 315 44.4
HPP92_000875 Vanilla planifolia HOM05D006705 ORTHO05D008179 2.7e-47 194.5 245 44.9
ATR0661G389 Amborella trichopoda HOM05D006705 ORTHO05D008179 8.0e-36 156.4 215 42.3
SEGI_04333 Sequoiadendron giganteum HOM05D006705 ORTHO05D000002 1.2e-31 142.5 184 43.5
Mapoly0048s0090 Marchantia polymorpha HOM05D006705 ORTHO05D008179 3.3e-29 134.4 218 36.7
Zm00001eb323580 Zea mays HOM05D006705 ORTHO05D008179 2.1e-28 131.7 256 35.2
Os07g0548300 Oryza sativa ssp. japonica HOM05D006705 ORTHO05D008179 4.4e-26 124.0 250 36.0
AagrBONN_evm.TU.Sc2ySwM_362.1316 Anthoceros agrestis HOM05D006705 ORTHO05D008179 5.1e-22 110.5 212 31.6
SMO180G0012 Selaginella moellendorffii HOM05D006705 ORTHO05D008179 8.1e-20 103.2 172 33.7
FvH4_5g30181 Fragaria vesca HOM05D006705 ORTHO05D008179 3.4e-18 97.8 79 59.5
Nitab4.5_0002710g0130 Nicotiana tabacum HOM05D006705 ORTHO05D008179 2.1e-12 78.6 43 86.0
CDE02G4098 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 1.4e-11 75.9 42 85.7
Pp3c11_21930 Physcomitrium patens HOM05D006705 ORTHO05D008179 1.4e-11 75.9 233 26.2
Gohir.D06G036701 Gossypium hirsutum HOM05D006705 ORTHO05D008179 2.0e-10 72.0 43 76.7
Gorai.010G041000 Gossypium raimondii HOM05D006705 ORTHO05D008179 2.0e-10 72.0 43 76.7
Eucgr.F03554 Eucalyptus grandis HOM05D006705 ORTHO05D008179 2.6e-10 71.6 43 74.4
Gohir.D05G336850 Gossypium hirsutum HOM05D006705 ORTHO05D008179 7.1e-08 63.5 51 62.7
BcaNung05253 Brassica carinata HOM05D006705 ORTHO05D008179 1.0e-06 59.7 43 60.5
Gohir.D06G157800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 1.7e-06 58.9 36 77.8
GSVIVG01035837001 Vitis vinifera HOM05D000001 ORTHO05D000003 2.3e-06 58.5 144 31.2
Actinidia13244 Actinidia chinensis HOM05D000001 ORTHO05D000003 3.9e-06 57.8 136 30.1
PGR142G1477 Punica granatum HOM05D000001 ORTHO05D009097 3.9e-06 57.8 145 28.3
Potri.013G103600 Populus trichocarpa HOM05D000001 ORTHO05D000003 5.1e-06 57.4 133 26.3


User provided reference genes

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