Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00143 Erythranthe guttata HOM05D003906 ORTHO05D004776 1.3e-307 1058.9 523 100.0
Migut.C01295 Erythranthe guttata HOM05D003906 ORTHO05D004776 1.5e-103 380.9 481 49.1
SalBow7G1596 Salvia bowleyana HOM05D003906 ORTHO05D004776 1.7e-94 350.9 403 50.1
Peaxi162Scf00076g00225 Petunia axillaris HOM05D003906 ORTHO05D004776 2.5e-90 337.0 405 48.1
Nitab4.5_0009321g0030 Nicotiana tabacum HOM05D003906 ORTHO05D004776 6.2e-89 332.4 404 47.0
Dinv41741 Davidia involucrata HOM05D003906 ORTHO05D004776 8.1e-89 332.0 461 44.7
SGA_v2.0_scaffold24G10576 Striga asiatica HOM05D003906 ORTHO05D004776 8.1e-89 332.0 426 46.5
MSTRG.1555 Avicennia marina HOM05D003906 ORTHO05D004776 1.1e-88 331.6 476 43.5
Sopen03g006150 Solanum pennellii HOM05D003906 ORTHO05D004776 7.6e-87 325.5 405 47.7
Dinv04083 Davidia involucrata HOM05D003906 ORTHO05D004776 9.9e-87 325.1 456 43.9
CAN.G354.51 Capsicum annuum HOM05D003906 ORTHO05D004776 1.7e-86 324.3 405 46.9
Solyc03g033380.3 Solanum lycopersicum HOM05D003906 ORTHO05D004776 4.9e-86 322.8 405 47.4
Oeu051791.1 Olea europaea HOM05D003906 ORTHO05D004776 4.2e-85 319.7 410 47.1
CSS0022245 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 9.3e-85 318.5 394 47.5
Cc10_g10260 Coffea canephora HOM05D003906 ORTHO05D004776 9.3e-85 318.5 403 47.1
CSS0049725 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 1.2e-84 318.2 394 47.5
unitig_749.g13881 Utricularia gibba HOM05D003906 ORTHO05D004776 6.0e-84 315.8 387 46.8
Actinidia23018 Actinidia chinensis HOM05D003906 ORTHO05D004776 2.3e-83 313.9 458 42.1
Hma1.2p1_0342F.1_g130710 Hydrangea macrophylla HOM05D003906 ORTHO05D004776 3.0e-83 313.5 406 46.6
Manes.18G104100 Manihot esculenta HOM05D003906 ORTHO05D004776 9.6e-82 308.5 403 45.4
Oeu064077.1 Olea europaea HOM05D003906 ORTHO05D004776 2.8e-81 307.0 412 46.1
TWI59G1118 Tripterygium wilfordii HOM05D003906 ORTHO05D004776 3.7e-81 306.6 433 41.8
Phvul.011G000900 Phaseolus vulgaris HOM05D003906 ORTHO05D004776 8.1e-81 305.4 407 43.7
VMungo1127G1719 Vigna mungo HOM05D003906 ORTHO05D004776 8.1e-81 305.4 407 43.5
Manes.02G196200 Manihot esculenta HOM05D003906 ORTHO05D004776 1.4e-80 304.7 403 44.7
Hund16785 Selenicereus undatus HOM05D003906 ORTHO05D004776 1.4e-80 304.7 407 45.0
Gohir.A09G115500 Gossypium hirsutum HOM05D003906 ORTHO05D004776 2.4e-80 303.9 403 44.2
Gohir.D09G112300 Gossypium hirsutum HOM05D003906 ORTHO05D004776 4.0e-80 303.1 405 44.0
Gorai.006G130100 Gossypium raimondii HOM05D003906 ORTHO05D004776 4.0e-80 303.1 405 44.0
Glyma.08G238500 Glycine max HOM05D003906 ORTHO05D004776 5.3e-80 302.8 410 43.2
FvH4_5g32270 Fragaria vesca HOM05D003906 ORTHO05D004776 6.9e-80 302.4 412 43.4
Ciclev10001078m.g Citrus clementina HOM05D003906 ORTHO05D004776 1.5e-79 301.2 410 42.4
Eucgr.F02579 Eucalyptus grandis HOM05D003906 ORTHO05D004776 2.0e-79 300.8 404 42.6
TPR.G34173 Trifolium pratense HOM05D003906 ORTHO05D004776 2.0e-79 300.8 394 43.7
Medtr4g032800 Medicago truncatula HOM05D003906 ORTHO05D004776 2.6e-79 300.4 405 42.7
ECA247G1339 Erigeron canadensis HOM05D003906 ORTHO05D004776 4.5e-79 299.7 384 43.2
Glyma.12G000900 Glycine max HOM05D003906 ORTHO05D004776 4.5e-79 299.7 413 43.6
HanXRQChr04g0109631 Helianthus annuus HOM05D003906 ORTHO05D004776 5.8e-79 299.3 385 44.2
CsaV3_5G040450 Cucumis sativus L. HOM05D003906 ORTHO05D004776 7.6e-79 298.9 405 42.5
TAR628G0992 Trochodendron aralioides HOM05D003906 ORTHO05D004776 9.9e-79 298.5 405 43.5
MELO3C022219.2 Cucumis melo HOM05D003906 ORTHO05D004776 1.7e-78 297.7 405 42.5
Potri.013G108400 Populus trichocarpa HOM05D003906 ORTHO05D004776 1.7e-78 297.7 390 44.9
Atru.chr2.1825 Acer truncatum HOM05D003906 ORTHO05D004776 2.2e-78 297.4 410 42.7
PSO170G2127 Papaver somniferum HOM05D003906 ORTHO05D004776 3.8e-78 296.6 404 42.8
CiPaw.08G001800 Carya illinoinensis HOM05D003906 ORTHO05D004776 4.9e-78 296.2 399 44.1
Prupe.1G552200 Prunus persica HOM05D003906 ORTHO05D004776 4.9e-78 296.2 406 42.6
Duzib177G0129 Durio zibethinus HOM05D003906 ORTHO05D004776 6.4e-78 295.8 405 42.7
PSO017G0948 Papaver somniferum HOM05D003906 ORTHO05D004776 8.4e-78 295.4 404 42.8
Ca_19699_v3 Cicer arietinum L. HOM05D003906 ORTHO05D004776 2.5e-77 293.9 403 41.7
Lalb_Chr01g0000071 Lupinus albus HOM05D003906 ORTHO05D004776 3.2e-77 293.5 406 43.1
PGR042G0234 Punica granatum HOM05D003906 ORTHO05D004776 3.2e-77 293.5 396 43.2
Gohir.A05G251300 Gossypium hirsutum HOM05D003906 ORTHO05D004776 5.5e-77 292.7 409 43.0
Rhsim06G0114100 Rhododendron simsii HOM05D003906 ORTHO05D004776 5.5e-77 292.7 523 37.9
arahy.Tifrunner.gnm1.ann1.NDRV14 Arachis hypogaea HOM05D003906 ORTHO05D004776 9.3e-77 292.0 405 41.7
Gohir.D05G252500 Gossypium hirsutum HOM05D003906 ORTHO05D004776 9.3e-77 292.0 409 42.8
Cfa012932 Carpinus fangiana HOM05D003906 ORTHO05D000991 1.2e-76 291.6 409 43.5
QL02p025746 Quercus lobata HOM05D003906 ORTHO05D004776 2.1e-76 290.8 456 39.5
Gorai.009G264700 Gossypium raimondii HOM05D003906 ORTHO05D004776 6.0e-76 289.3 409 42.3
GSVIVG01001786001 Vitis vinifera HOM05D003906 ORTHO05D004776 2.3e-75 287.3 405 42.2
ATR1136G046 Amborella trichopoda HOM05D003906 ORTHO05D004776 3.0e-75 287.0 398 43.0
Sed0011736 Sechium edule HOM05D003906 ORTHO05D004776 3.0e-75 287.0 391 41.9
Nitab4.5_0000130g0080 Nicotiana tabacum HOM05D003906 ORTHO05D004776 3.9e-75 286.6 404 43.3
vmacro12471 Vaccinium macrocarpon HOM05D003906 ORTHO05D004776 5.1e-75 286.2 335 46.9
THA.LOC104816477 Tarenaya hassleriana HOM05D003906 ORTHO05D004776 1.5e-74 284.6 410 43.2
FAN18G2269 Fragaria x ananassa HOM05D003906 ORTHO05D004776 2.5e-74 283.9 443 40.6
Lsat_1_v5_gn_1_12460 Lactuca sativa HOM05D003906 ORTHO05D004776 3.3e-74 283.5 391 42.2
Lj3g0000257 Lotus japonicus HOM05D003906 ORTHO05D004776 5.6e-74 282.7 407 42.0
Thhalv10001818m.g Eutrema salsugineum HOM05D003906 ORTHO05D004776 2.1e-73 280.8 406 40.4
Sp1g30230 Schrenkiella parvula HOM05D003906 ORTHO05D004776 3.7e-73 280.0 406 40.4
Ah.05g178390 Amaranthus hybridus HOM05D003906 ORTHO05D004776 3.1e-72 276.9 404 40.3
C06p11170 Brassica napus HOM05D003906 ORTHO05D004776 3.1e-72 276.9 406 40.1
Aa31LG6G8750 Aethionema arabicum HOM05D003906 ORTHO05D004776 5.3e-72 276.2 412 39.3
BcaB07g33091 Brassica carinata HOM05D003906 ORTHO05D004776 5.3e-72 276.2 406 40.1
A09p31780 Brassica napus HOM05D003906 ORTHO05D004776 6.9e-72 275.8 406 40.4
BcaC08g43739 Brassica carinata HOM05D003906 ORTHO05D004776 1.5e-71 274.6 406 39.9
BolC6t36252H Brassica oleracea HOM05D003906 ORTHO05D004776 1.5e-71 274.6 406 39.9
AT1G35470 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 2.6e-71 273.9 406 40.1
BraA09t38715Z Brassica rapa HOM05D003906 ORTHO05D004776 2.6e-71 273.9 406 40.1
BcaB03g13663 Brassica carinata HOM05D003906 ORTHO05D004776 3.4e-71 273.5 404 40.1
Aqoxy5G02955 Aquilegia oxysepala HOM05D003906 ORTHO05D004776 5.8e-71 272.7 396 42.2
MD15G1410300 Malus domestica HOM05D003906 ORTHO05D004776 1.3e-70 271.6 425 39.8
Duzib116G0916 Durio zibethinus HOM05D003906 ORTHO05D004776 3.8e-70 270.0 404 41.3
FAN04G2445 Fragaria x ananassa HOM05D003906 ORTHO05D004776 3.8e-70 270.0 399 41.4
Os02g0556600 Oryza sativa ssp. japonica HOM05D003906 ORTHO05D004776 4.9e-70 269.6 391 40.9
arahy.Tifrunner.gnm1.ann1.AC170Q Arachis hypogaea HOM05D003906 ORTHO05D004776 1.9e-69 267.7 457 37.0
Potri.019G080800 Populus trichocarpa HOM05D003906 ORTHO05D004776 1.9e-69 267.7 329 44.7
Carub.0006s2784 Capsella rubella HOM05D003906 ORTHO05D004776 2.5e-69 267.3 386 40.9
Carub.0001s3308 Capsella rubella HOM05D003906 ORTHO05D004776 5.5e-69 266.2 406 37.9
AL1G50340 Arabidopsis lyrata HOM05D003906 ORTHO05D004776 6.0e-68 262.7 428 38.6
CDE08G1205 Ceratophyllum demersum HOM05D003906 ORTHO05D004776 6.0e-68 262.7 389 40.9
DCAR_001451 Daucus carota HOM05D003906 ORTHO05D004776 6.0e-68 262.7 403 41.4
Sc23g0001390 Simmondsia chinensis HOM05D003906 ORTHO05D004776 6.0e-68 262.7 341 44.9
MD08G1220100 Malus domestica HOM05D003906 ORTHO05D004776 7.9e-68 262.3 394 40.9
AL6G42970 Arabidopsis lyrata HOM05D003906 ORTHO05D004776 1.0e-67 261.9 402 40.0
BcaB01g02792 Brassica carinata HOM05D003906 ORTHO05D004776 1.3e-67 261.5 405 40.0
EL10Ac1g00112 Beta vulgaris HOM05D003906 ORTHO05D004776 3.0e-67 260.4 387 40.1
AT4G09340 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 3.9e-67 260.0 400 38.5
Thecc.08G187700 Theobroma cacao HOM05D003906 ORTHO05D004776 3.9e-67 260.0 404 39.1
Sabra19G0091700 Salix brachista HOM05D003906 ORTHO05D004776 5.1e-67 259.6 399 40.6
Lj4C483G1 Lonicera japonica HOM05D003906 ORTHO05D004776 6.7e-67 259.2 394 42.1
AUR62023516 Chenopodium quinoa HOM05D003906 ORTHO05D004776 8.7e-67 258.8 404 38.4
Sp6g08200 Schrenkiella parvula HOM05D003906 ORTHO05D004776 1.5e-66 258.1 403 40.0
A03p28530 Brassica napus HOM05D003906 ORTHO05D004776 4.3e-66 256.5 405 40.5
Zm00001eb243840 Zea mays HOM05D003906 ORTHO05D004776 5.7e-66 256.1 375 40.3
BcaC01g04722 Brassica carinata HOM05D003906 ORTHO05D004776 9.7e-66 255.4 405 40.2
BolC3t15761H Brassica oleracea HOM05D003906 ORTHO05D004776 9.7e-66 255.4 405 40.2
BraA03t12055Z Brassica rapa HOM05D003906 ORTHO05D004776 1.3e-65 255.0 405 40.5
BolC5t32471H Brassica oleracea HOM05D003906 ORTHO05D004776 2.2e-65 254.2 391 38.6
A05p23780 Brassica napus HOM05D003906 ORTHO05D004776 3.7e-65 253.4 402 37.8
BraA05t21248Z Brassica rapa HOM05D003906 ORTHO05D004776 3.7e-65 253.4 402 37.8
Zm00001eb182000 Zea mays HOM05D003906 ORTHO05D004776 3.7e-65 253.4 375 40.0
HPP92_001193 Vanilla planifolia HOM05D003906 ORTHO05D004776 4.1e-64 250.0 402 39.8
BcaC05g27736 Brassica carinata HOM05D003906 ORTHO05D004776 7.7e-63 245.7 405 38.0
C05p37240 Brassica napus HOM05D003906 ORTHO05D004776 7.7e-63 245.7 405 38.0
Mapoly0002s0237 Marchantia polymorpha HOM05D003906 ORTHO05D004776 2.9e-62 243.8 386 38.9
AUR62004621 Chenopodium quinoa HOM05D003906 ORTHO05D004776 5.0e-62 243.0 404 37.4
SMO236G0134 Selaginella moellendorffii HOM05D003906 ORTHO05D004776 2.5e-61 240.7 375 40.3
MBI06_g32171_MAGBIO Magnolia biondii HOM05D003906 ORTHO05D004776 5.5e-61 239.6 409 38.1
Haze_21286 Corylus avellana HOM05D003906 ORTHO05D004776 1.4e-59 235.0 435 37.7
Pp3c25_15350 Physcomitrium patens HOM05D003906 ORTHO05D004776 2.4e-56 224.2 389 37.8
Pp3c16_23970 Physcomitrium patens HOM05D003906 ORTHO05D004776 5.3e-56 223.0 404 35.4
Psat7g226120 Pisum sativum HOM05D003906 ORTHO05D004776 3.6e-52 210.3 293 40.6
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.0e-51 208.8 425 35.3
COL.COLO4_24795 Corchorus olitorius HOM05D003906 ORTHO05D004776 9.7e-50 202.2 430 34.0
ClCG08G000300 Citrullus lanatus HOM05D003906 ORTHO05D004776 6.3e-49 199.5 257 45.1
CARHR034240 Cardamine hirsuta HOM05D003906 ORTHO05D004776 1.8e-48 198.0 293 38.2
RcHm_v2.0_Chr7g0228471 Rosa chinensis HOM05D003906 ORTHO05D004776 5.3e-48 196.4 242 46.3
Sabra13G0093600 Salix brachista HOM05D003906 ORTHO05D004776 3.5e-47 193.7 538 30.5
C03p34490 Brassica napus HOM05D003906 ORTHO05D004776 4.5e-47 193.4 303 38.3
Nn3g18941 Nelumbo nucifera HOM05D003906 ORTHO05D004776 1.3e-46 191.8 224 47.8
Sed0013629 Sechium edule HOM05D003906 ORTHO05D004776 3.0e-43 180.6 226 45.1
CDE02G3748 Ceratophyllum demersum HOM05D003906 ORTHO05D004776 3.9e-43 180.3 408 33.6
AT4G09200 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 4.8e-41 173.3 381 31.5
AT4G09310 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 4.8e-41 173.3 381 31.5
Cfa012929 Carpinus fangiana HOM05D003906 ORTHO05D004776 6.5e-38 162.9 175 50.9
CSS0005180 Camellia sinensis var. sinensis HOM05D003906 ORTHO05D004776 4.7e-36 156.8 266 37.6
Cre09.g387801 Chlamydomonas reinhardtii HOM05D003906 ORTHO05D004776 4.7e-36 156.8 356 31.5
SHI26286 Sapria himalayana HOM05D003906 ORTHO05D004776 4.8e-33 146.7 210 37.6
CARHR260350 Cardamine hirsuta HOM05D003906 ORTHO05D004776 3.5e-31 140.6 243 36.2
Cpa.g.c30412.1 Carica papaya HOM05D003906 ORTHO05D004776 8.8e-27 125.9 125 55.2
AT4G09250 Arabidopsis thaliana HOM05D003906 ORTHO05D004776 1.2e-26 125.6 379 27.4
Nn5g27566 Nelumbo nucifera HOM05D003906 ORTHO05D004776 1.5e-21 108.6 164 40.9
PRCOL_00002342 Prasinoderma coloniale HOM05D003906 ORTHO05D004776 1.6e-20 105.1 293 28.3
RcHm_v2.0_Chr7g0228461 Rosa chinensis HOM05D003906 ORTHO05D004776 6.1e-20 103.2 169 37.9
Cfa023121 Carpinus fangiana HOM05D003906 ORTHO05D004776 1.8e-19 101.7 295 27.5
Thecc.08G187400 Theobroma cacao HOM05D003906 ORTHO05D004776 2.8e-17 94.4 115 46.1
DCAR_028620 Daucus carota HOM05D003906 ORTHO05D004776 6.3e-17 93.2 103 48.5
DCAR_028622 Daucus carota HOM05D003906 ORTHO05D004776 6.3e-17 93.2 103 48.5
FAN13G2487 Fragaria x ananassa HOM05D003906 ORTHO05D004776 8.3e-17 92.8 129 42.6
SabraUnG0004400 Salix brachista HOM05D003906 ORTHO05D004776 1.8e-16 91.7 139 39.6
MCO01G564 Micromonas commoda HOM05D003906 ORTHO05D004776 2.3e-14 84.7 228 27.6
CARHR034230 Cardamine hirsuta HOM05D003906 ORTHO05D004776 4.3e-13 80.5 88 51.1
CAN.G354.54 Capsicum annuum HOM05D003906 ORTHO05D004776 3.6e-12 77.4 81 53.1
SEGI_20889 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 8.9e-11 72.8 94 39.4
BcaB01g02795 Brassica carinata HOM05D003906 ORTHO05D004776 1.2e-10 72.4 206 29.6
BolC3t15755H Brassica oleracea HOM05D003906 ORTHO05D004776 4.4e-10 70.5 203 28.6
SEGI_33732 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 7.5e-10 69.7 116 36.2
A03p28510 Brassica napus HOM05D003906 ORTHO05D004776 1.3e-09 68.9 206 28.6
unitig_32.g11182 Utricularia gibba HOM05D000008 ORTHO05D000005 2.2e-09 68.2 116 38.8
SEGI_28086 Sequoiadendron giganteum HOM05D003906 ORTHO05D004776 8.3e-09 66.2 105 37.1
AagrBONN_evm.TU.Sc2ySwM_228.4865 Anthoceros agrestis HOM05D003906 ORTHO05D011031 5.4e-08 63.5 131 31.3
Pp3c22_200 Physcomitrium patens HOM05D003906 ORTHO05D003636 5.4e-08 63.5 168 29.2
Lj4g0013515 Lotus japonicus HOM05D003178 ORTHO05D003636 1.6e-07 62.0 240 27.1
AagrBONN_evm.TU.Sc2ySwM_369.175 Anthoceros agrestis HOM05D003906 ORTHO05D004776 3.5e-07 60.8 120 34.2
Migut.C00777 Erythranthe guttata HOM05D001685 ORTHO05D009095 7.8e-07 59.7 177 27.1
DCAR_028625 Daucus carota HOM05D003906 ORTHO05D004776 2.3e-06 58.2 71 43.7
CAN.G1398.5 Capsicum annuum HOM05D003178 ORTHO05D003636 8.6e-06 56.2 192 26.6
Glyma.13G243700 Glycine max HOM05D003178 ORTHO05D003636 8.6e-06 56.2 209 24.4
Glyma.15G070000 Glycine max HOM05D003178 ORTHO05D003636 8.6e-06 56.2 209 24.4


User provided reference genes

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