Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00642 Erythranthe guttata HOM05D003620 ORTHO05D004261 4.8e-82 307.8 153 100.0
MSTRG.16561 Avicennia marina HOM05D003620 ORTHO05D004261 3.7e-58 228.4 151 75.5
SalBow5G2235 Salvia bowleyana HOM05D003620 ORTHO05D004261 1.2e-53 213.4 157 70.7
SGA_v2.0_scaffold83G26271 Striga asiatica HOM05D003620 ORTHO05D004261 1.6e-53 213.0 151 73.5
Cc02_g21930 Coffea canephora HOM05D003620 ORTHO05D004261 9.1e-49 197.2 156 65.4
Oeu047370.1 Olea europaea HOM05D003620 ORTHO05D004261 3.2e-46 188.7 156 64.7
CAN.G523.97 Capsicum annuum HOM05D003620 ORTHO05D004261 5.5e-46 188.0 148 64.9
Actinidia00242 Actinidia chinensis HOM05D003620 ORTHO05D004261 9.4e-46 187.2 149 62.4
Oeu037206.2 Olea europaea HOM05D003620 ORTHO05D004261 1.2e-45 186.8 158 64.6
Nitab4.5_0008610g0050 Nicotiana tabacum HOM05D003620 ORTHO05D004261 1.6e-45 186.4 153 60.8
Nitab4.5_0007987g0020 Nicotiana tabacum HOM05D003620 ORTHO05D004261 3.6e-45 185.3 153 60.8
Solyc01g104880.3 Solanum lycopersicum HOM05D003620 ORTHO05D004261 4.0e-44 181.8 148 62.2
Sopen01g047400 Solanum pennellii HOM05D003620 ORTHO05D004261 1.2e-43 180.3 148 61.5
TWI14G0354 Tripterygium wilfordii HOM05D003620 ORTHO05D004261 2.8e-42 175.6 139 63.3
CSS0011415 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 3.7e-42 175.3 154 61.0
Manes.10G117200 Manihot esculenta HOM05D003620 ORTHO05D004261 1.1e-41 173.7 151 60.9
Atru.chr6.881 Acer truncatum HOM05D003620 ORTHO05D004261 5.4e-41 171.4 147 61.9
Cfa005564 Carpinus fangiana HOM05D003620 ORTHO05D004261 5.4e-41 171.4 144 62.5
Potri.003G061700 Populus trichocarpa HOM05D003620 ORTHO05D004261 3.5e-40 168.7 165 55.8
Actinidia38967 Actinidia chinensis HOM05D003620 ORTHO05D004261 5.9e-40 167.9 151 57.6
Manes.07G024800 Manihot esculenta HOM05D003620 ORTHO05D004261 1.3e-39 166.8 151 59.6
THA.LOC104817775 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 1.3e-39 166.8 148 62.2
Sed0005951 Sechium edule HOM05D003620 ORTHO05D004261 1.7e-39 166.4 157 57.3
Gohir.D12G014500 Gossypium hirsutum HOM05D003620 ORTHO05D004261 2.9e-39 165.6 150 59.3
CSS0027167 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 3.8e-39 165.2 116 68.1
Glyma.15G051100 Glycine max HOM05D003620 ORTHO05D004261 3.8e-39 165.2 145 61.4
Nn1g06259 Nelumbo nucifera HOM05D003620 ORTHO05D004261 3.8e-39 165.2 151 58.9
Lsat_1_v5_gn_7_80501 Lactuca sativa HOM05D003620 ORTHO05D004261 6.6e-39 164.5 158 55.7
Glyma.08G181200 Glycine max HOM05D003620 ORTHO05D004261 8.6e-39 164.1 145 61.4
Gorai.008G014600 Gossypium raimondii HOM05D003620 ORTHO05D004261 8.6e-39 164.1 150 59.3
Dinv24229 Davidia involucrata HOM05D003620 ORTHO05D004261 1.5e-38 163.3 145 58.6
Duzib132G0147 Durio zibethinus HOM05D003620 ORTHO05D004261 1.5e-38 163.3 151 58.9
AUR62004784 Chenopodium quinoa HOM05D003620 ORTHO05D004261 2.5e-38 162.5 143 60.1
CsaV3_7G006180 Cucumis sativus L. HOM05D003620 ORTHO05D004261 2.5e-38 162.5 156 55.1
ECA236G2397 Erigeron canadensis HOM05D003620 ORTHO05D004261 1.2e-37 160.2 153 53.6
A01p17230 Brassica napus HOM05D003620 ORTHO05D004261 1.6e-37 159.8 145 60.0
Phvul.006G208800 Phaseolus vulgaris HOM05D003620 ORTHO05D004261 2.1e-37 159.5 143 58.7
BcaC09g50725 Brassica carinata HOM05D003620 ORTHO05D004261 2.8e-37 159.1 145 60.0
C01p21590 Brassica napus HOM05D003620 ORTHO05D004261 2.8e-37 159.1 145 60.0
BolC1t02078H Brassica oleracea HOM05D003620 ORTHO05D004261 2.8e-37 159.1 145 60.0
BraA01t01679Z Brassica rapa HOM05D003620 ORTHO05D004261 2.8e-37 159.1 145 60.0
Gohir.A12G013866 Gossypium hirsutum HOM05D003620 ORTHO05D004261 2.8e-37 159.1 150 58.7
Lj6g0005534 Lotus japonicus HOM05D003620 ORTHO05D004261 3.6e-37 158.7 147 54.4
PSO541G1613 Papaver somniferum HOM05D003620 ORTHO05D004261 3.6e-37 158.7 156 53.2
VMungo0540G0770 Vigna mungo HOM05D003620 ORTHO05D004261 4.7e-37 158.3 145 58.6
CiPaw.05G039200 Carya illinoinensis HOM05D003620 ORTHO05D004261 6.1e-37 157.9 146 56.8
MD08G1222700 Malus domestica HOM05D003620 ORTHO05D004261 6.1e-37 157.9 152 56.6
Prupe.1G560600 Prunus persica HOM05D003620 ORTHO05D004261 6.1e-37 157.9 145 60.0
TAR625G1066 Trochodendron aralioides HOM05D003620 ORTHO05D004261 6.1e-37 157.9 150 55.3
Potri.001G172400 Populus trichocarpa HOM05D003620 ORTHO05D004261 8.0e-37 157.5 152 57.2
Eucgr.G00656 Eucalyptus grandis HOM05D003620 ORTHO05D004261 1.4e-36 156.8 126 66.7
AL161U10010 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 1.8e-36 156.4 145 58.6
MELO3C018674.2 Cucumis melo HOM05D003620 ORTHO05D004261 1.8e-36 156.4 157 53.5
Thhalv10024661m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 1.8e-36 156.4 145 60.0
arahy.Tifrunner.gnm1.ann1.4105RR Arachis hypogaea HOM05D003620 ORTHO05D004261 2.3e-36 156.0 156 53.2
Aqoxy6G00354 Aquilegia oxysepala HOM05D003620 ORTHO05D004261 4.0e-36 155.2 153 55.6
arahy.Tifrunner.gnm1.ann1.XM8XEN Arachis hypogaea HOM05D003620 ORTHO05D004261 4.0e-36 155.2 158 52.5
CARHR233480 Cardamine hirsuta HOM05D003620 ORTHO05D004261 4.0e-36 155.2 145 59.3
DCAR_001444 Daucus carota HOM05D003620 ORTHO05D004261 4.0e-36 155.2 195 47.2
AT5G57190 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 5.2e-36 154.8 145 57.2
Peaxi162Scf00001g00523 Petunia axillaris HOM05D003620 ORTHO05D004261 6.8e-36 154.5 154 55.8
EL10Ac4g08941 Beta vulgaris HOM05D003620 ORTHO05D004261 8.9e-36 154.1 145 59.3
Sp7g23980 Schrenkiella parvula HOM05D003620 ORTHO05D004261 8.9e-36 154.1 154 56.5
AT4G25970 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 1.2e-35 153.7 145 57.9
Ca_00113_v3 Cicer arietinum L. HOM05D003620 ORTHO05D004261 1.2e-35 153.7 145 52.4
Sabra01G0139300 Salix brachista HOM05D003620 ORTHO05D004261 1.5e-35 153.3 151 57.6
CANSAT11G0919 Cannabis sativa HOM05D003620 ORTHO05D004261 2.0e-35 152.9 119 64.7
CANSAT11G1106 Cannabis sativa HOM05D003620 ORTHO05D004261 2.0e-35 152.9 119 64.7
HanXRQChr03g0065791 Helianthus annuus HOM05D003620 ORTHO05D004261 2.0e-35 152.9 125 60.0
Thecc.02G144000 Theobroma cacao HOM05D003620 ORTHO05D004261 2.0e-35 152.9 152 56.6
BcaNung03773 Brassica carinata HOM05D003620 ORTHO05D004261 2.6e-35 152.5 145 57.9
HanXRQChr11g0337651 Helianthus annuus HOM05D003620 ORTHO05D004261 2.6e-35 152.5 148 52.0
Lsat_1_v5_gn_9_117920 Lactuca sativa HOM05D003620 ORTHO05D004261 2.6e-35 152.5 112 67.0
THA.LOC104811774 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 2.6e-35 152.5 122 63.9
AL7G27030 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 3.4e-35 152.1 145 57.2
Aa31LG3G330 Aethionema arabicum HOM05D003620 ORTHO05D004261 4.4e-35 151.8 145 56.6
MBI06_g29671_MAGBIO Magnolia biondii HOM05D003620 ORTHO05D004261 4.4e-35 151.8 144 53.5
TPR.G19731 Trifolium pratense HOM05D003620 ORTHO05D004261 4.4e-35 151.8 146 53.4
A10p14580 Brassica napus HOM05D003620 ORTHO05D004261 5.7e-35 151.4 143 53.8
Carub.0007s1498 Capsella rubella HOM05D003620 ORTHO05D004261 5.7e-35 151.4 145 56.6
Sc09g0004430 Simmondsia chinensis HOM05D003620 ORTHO05D004261 5.7e-35 151.4 154 53.9
Rhsim11G0134200 Rhododendron simsii HOM05D003620 ORTHO05D004261 7.5e-35 151.0 152 55.9
PGR042G1212 Punica granatum HOM05D003620 ORTHO05D004261 9.8e-35 150.6 145 57.9
QL02p098754 Quercus lobata HOM05D003620 ORTHO05D004261 9.8e-35 150.6 159 54.1
PSO675G2802 Papaver somniferum HOM05D003620 ORTHO05D004261 1.3e-34 150.2 156 51.3
BcaC04g19991 Brassica carinata HOM05D003620 ORTHO05D004261 1.7e-34 149.8 143 53.1
C09p49020 Brassica napus HOM05D003620 ORTHO05D004261 1.7e-34 149.8 143 53.1
BolC9t57753H Brassica oleracea HOM05D003620 ORTHO05D004261 1.7e-34 149.8 143 53.1
BraA10t43545Z Brassica rapa HOM05D003620 ORTHO05D004261 1.7e-34 149.8 143 53.1
CARHR270980 Cardamine hirsuta HOM05D003620 ORTHO05D004261 1.7e-34 149.8 143 55.2
BcaB08g36077 Brassica carinata HOM05D003620 ORTHO05D004261 2.2e-34 149.4 143 53.1
Sp6g18920 Schrenkiella parvula HOM05D003620 ORTHO05D004261 2.9e-34 149.1 147 53.7
Carub.0008s1770 Capsella rubella HOM05D003620 ORTHO05D004261 1.8e-33 146.4 145 54.5
Medtr2g008190 Medicago truncatula HOM05D003620 ORTHO05D004261 4.1e-33 145.2 147 53.7
FAN04G1518 Fragaria x ananassa HOM05D003620 ORTHO05D004261 9.2e-33 144.1 96 70.8
Psat1g218440 Pisum sativum HOM05D003620 ORTHO05D004261 1.6e-32 143.3 147 49.7
RcHm_v2.0_Chr7g0225351 Rosa chinensis HOM05D003620 ORTHO05D004261 2.0e-32 142.9 96 70.8
FvH4_5g30530 Fragaria vesca HOM05D003620 ORTHO05D004261 3.5e-32 142.1 96 69.8
FAN13G1243 Fragaria x ananassa HOM05D003620 ORTHO05D004261 3.5e-32 142.1 96 69.8
FAN18G1779 Fragaria x ananassa HOM05D003620 ORTHO05D004261 3.5e-32 142.1 96 69.8
Thhalv10012950m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 5.9e-32 141.4 144 51.4
FAN08G3618 Fragaria x ananassa HOM05D003620 ORTHO05D004261 7.8e-32 141.0 96 68.8
CDE08G1148 Ceratophyllum demersum HOM05D003620 ORTHO05D004261 1.3e-31 140.2 148 49.3
Ciclev10000710m.g Citrus clementina HOM05D003620 ORTHO05D004261 2.3e-31 139.4 184 47.8
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 5.0e-31 138.3 159 48.4
Zm00001eb362570 Zea mays HOM05D003620 ORTHO05D004261 8.6e-31 137.5 146 47.3
ATR1136G049 Amborella trichopoda HOM05D003620 ORTHO05D004261 2.5e-30 136.0 116 56.0
Lj5C243G7 Lonicera japonica HOM05D003620 ORTHO05D004261 3.3e-30 135.6 107 58.9
ClCG09G013430 Citrullus lanatus HOM05D003620 ORTHO05D004261 7.3e-30 134.4 136 54.4
Peaxi162Scf00152g01227 Petunia axillaris HOM05D003620 ORTHO05D004261 1.2e-29 133.7 97 63.9
HPP92_019398 Vanilla planifolia HOM05D003620 ORTHO05D004261 8.0e-29 131.0 130 50.8
Lalb_Chr18g0060681 Lupinus albus HOM05D003620 ORTHO05D004261 1.0e-28 130.6 118 54.2
GSVIVG01029735001 Vitis vinifera HOM05D003620 ORTHO05D004261 6.8e-28 127.9 122 55.7
Mapoly0064s0044 Marchantia polymorpha HOM05D003620 ORTHO05D004261 2.0e-27 126.3 108 53.7
Gohir.A12G013800 Gossypium hirsutum HOM05D003620 ORTHO05D004261 1.3e-26 123.6 78 71.8
Pp3c15_7420 Physcomitrium patens HOM05D003620 ORTHO05D004261 1.9e-25 119.8 108 52.8
AagrBONN_evm.TU.Sc2ySwM_228.3970 Anthoceros agrestis HOM05D003620 ORTHO05D004261 7.0e-25 117.9 104 49.0
AL8G33150 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 9.2e-25 117.5 146 47.9
COL.COLO4_20874 Corchorus olitorius HOM05D003620 ORTHO05D004261 3.0e-23 112.5 152 46.7
Haze_10767 Corylus avellana HOM05D003620 ORTHO05D004261 8.9e-20 100.9 95 61.1
Haze_10763 Corylus avellana HOM05D003620 ORTHO05D004261 2.0e-19 99.8 95 62.1
QL08p057600 Quercus lobata HOM05D003620 ORTHO05D004261 8.6e-15 84.3 110 50.9
CBR_g4360 Chara braunii HOM05D003620 ORTHO05D004261 4.3e-14 82.0 83 43.4
Cpa.g.sc2.53 Carica papaya HOM05D003620 ORTHO05D004261 1.4e-12 77.0 103 51.5
HanXRQChr04g0126841 Helianthus annuus HOM05D003620 ORTHO05D004261 9.9e-11 70.9 56 55.4
Sabra03G0035800 Salix brachista HOM05D003620 ORTHO05D004261 9.9e-11 70.9 45 71.1
SMO244G0007 Selaginella moellendorffii HOM05D003620 ORTHO05D004261 8.4e-10 67.8 90 37.8
SEGI_17560 Sequoiadendron giganteum HOM05D003620 ORTHO05D004261 3.0e-07 59.3 50 54.0
Medtr5g009630 Medicago truncatula HOM05D004543 ORTHO05D004261 3.9e-07 58.9 45 57.8
Medtr7g104390 Medicago truncatula HOM05D003620 ORTHO05D004261 5.1e-07 58.5 48 56.2


User provided reference genes

Program Settings