Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g025470 Medicago truncatula HOM05D000216 ORTHO05D003638 1.7e-62 242.7 138 100.0
Medtr3g029550 Medicago truncatula HOM05D000216 ORTHO05D003638 1.9e-37 159.5 163 58.9
Medtr4g051103 Medicago truncatula HOM05D000216 ORTHO05D003638 1.9e-37 159.5 163 58.9
Psat0s2754g0240 Pisum sativum HOM05D000216 ORTHO05D003638 1.9e-37 159.5 163 58.9
Psat0s2961g0080 Pisum sativum HOM05D000216 ORTHO05D003638 1.9e-37 159.5 163 58.9
Psat0s3650g0160 Pisum sativum HOM05D000216 ORTHO05D003638 1.9e-37 159.5 163 58.9
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 1.9e-37 159.5 163 58.9
Psat6g219400 Pisum sativum HOM05D000216 ORTHO05D003638 1.9e-37 159.5 163 58.9
Psat7g033680 Pisum sativum HOM05D000216 ORTHO05D003638 1.9e-37 159.5 163 58.9
LjContig00318g0018562 Lotus japonicus HOM05D000216 ORTHO05D003638 2.5e-37 159.1 163 58.9
RcHm_v2.0_CPg0502431 Rosa chinensis HOM05D000216 ORTHO05D003638 5.5e-37 157.9 163 57.7
unitig_91.g26494 Utricularia gibba HOM05D000216 ORTHO05D003638 5.5e-37 157.9 163 58.3
DCAR_032472 Daucus carota HOM05D000216 ORTHO05D003638 7.2e-37 157.5 163 58.3
Sed0006587 Sechium edule HOM05D000216 ORTHO05D003638 7.2e-37 157.5 163 58.3
Sed0012920 Sechium edule HOM05D000216 ORTHO05D003638 7.2e-37 157.5 163 58.3
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 7.2e-37 157.5 163 57.7
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 9.4e-37 157.1 163 57.1
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 9.4e-37 157.1 163 57.1
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 9.4e-37 157.1 163 57.1
HanXRQChr00c0601g0576511 Helianthus annuus HOM05D000216 ORTHO05D003638 9.4e-37 157.1 136 66.9
Potri.013G139080 Populus trichocarpa HOM05D000216 ORTHO05D003638 9.4e-37 157.1 163 58.9
HanXRQChr08g0210201 Helianthus annuus HOM05D000216 ORTHO05D003638 1.2e-36 156.8 163 57.1
HanXRQChr10g0282501 Helianthus annuus HOM05D000216 ORTHO05D003638 1.2e-36 156.8 163 57.1
HanXRQChr11g0326631 Helianthus annuus HOM05D000216 ORTHO05D003638 1.2e-36 156.8 163 57.1
HanXRQCPg0579821 Helianthus annuus HOM05D000216 ORTHO05D003638 1.2e-36 156.8 163 57.1
Lsat_1_v5_gn_2_1641 Lactuca sativa HOM05D000216 ORTHO05D003638 1.2e-36 156.8 163 57.7
SalBow1G2877 Salvia bowleyana HOM05D000216 ORTHO05D003638 1.6e-36 156.4 163 57.7
Lalb_Chr07g0192171 Lupinus albus HOM05D000216 ORTHO05D003638 2.1e-36 156.0 163 58.3
PSO548G0039 Papaver somniferum HOM05D000216 ORTHO05D003638 2.1e-36 156.0 167 56.3
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.7e-36 155.6 163 57.1
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 2.7e-36 155.6 163 57.1
Lj2C1238G11 Lonicera japonica HOM05D000216 ORTHO05D003638 2.7e-36 155.6 163 57.1
LjContig00489g0001571 Lotus japonicus HOM05D000216 ORTHO05D003638 2.7e-36 155.6 163 57.1
PGR111G0049 Punica granatum HOM05D000216 ORTHO05D003638 2.7e-36 155.6 163 57.1
Sed0015108 Sechium edule HOM05D000216 ORTHO05D003638 2.7e-36 155.6 163 57.1
ATCG00150 Arabidopsis thaliana HOM05D000216 ORTHO05D003638 3.6e-36 155.2 163 57.7
BNapus_Darmor_BZH_scaffold_253p00040 Brassica napus HOM05D000216 ORTHO05D003638 3.6e-36 155.2 163 57.7
BolSC37t60770H Brassica oleracea HOM05D000216 ORTHO05D003638 3.6e-36 155.2 163 57.7
BolSC45t60878H Brassica oleracea HOM05D000216 ORTHO05D003638 3.6e-36 155.2 163 57.7
BraSC151t45693Z Brassica rapa HOM05D000216 ORTHO05D003638 3.6e-36 155.2 163 57.7
BraSC59t46515Z Brassica rapa HOM05D000216 ORTHO05D003638 3.6e-36 155.2 163 57.7
CARHR281900 Cardamine hirsuta HOM05D000216 ORTHO05D003638 3.6e-36 155.2 163 57.7
Ciclev10013984m.g Citrus clementina HOM05D000216 ORTHO05D003638 4.7e-36 154.8 163 58.3
HanXRQChr13g0415501 Helianthus annuus HOM05D000216 ORTHO05D003638 4.7e-36 154.8 163 56.4
Medtr0140s0070 Medicago truncatula HOM05D000216 ORTHO05D003638 4.7e-36 154.8 141 63.8
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 8.0e-36 154.1 163 57.1
Phvul.003G256800 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 8.0e-36 154.1 163 57.1
Zm00001eb435250 Zea mays HOM05D000216 ORTHO05D003638 8.0e-36 154.1 167 56.3
Zm00001eb435460 Zea mays HOM05D000216 ORTHO05D003638 8.0e-36 154.1 167 56.3
Zm00001eb435730 Zea mays HOM05D000216 ORTHO05D003638 8.0e-36 154.1 167 56.3
Zm00001eb436810 Zea mays HOM05D000216 ORTHO05D003638 8.0e-36 154.1 167 56.3
Zm00001eb437240 Zea mays HOM05D000216 ORTHO05D003638 8.0e-36 154.1 167 56.3
Zm00001eb438330 Zea mays HOM05D000216 ORTHO05D003638 8.0e-36 154.1 167 56.3
Zm00001eb441010 Zea mays HOM05D000216 ORTHO05D003638 8.0e-36 154.1 167 56.3
Zm00001eb442740 Zea mays HOM05D000216 ORTHO05D003638 8.0e-36 154.1 167 56.3
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 1.0e-35 153.7 167 55.7
QL93p0837_0003 Quercus lobata HOM05D000216 ORTHO05D003638 1.0e-35 153.7 162 57.4
AUR62012105 Chenopodium quinoa HOM05D000216 ORTHO05D003638 1.8e-35 152.9 163 56.4
Ah.10g027620 Amaranthus hybridus HOM05D000216 ORTHO05D003638 2.3e-35 152.5 163 55.8
Ah.10g027780 Amaranthus hybridus HOM05D000216 ORTHO05D003638 2.3e-35 152.5 163 55.8
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 2.3e-35 152.5 163 56.4
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.8e-35 150.6 163 55.8
CAN.G386.26 Capsicum annuum HOM05D000216 ORTHO05D003638 2.6e-34 149.1 163 55.2
Oeu028759.1 Olea europaea HOM05D000216 ORTHO05D003638 2.6e-34 149.1 163 54.0
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 5.7e-34 147.9 163 55.2
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 9.8e-34 147.1 168 56.0
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 9.8e-34 147.1 168 56.0
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 9.8e-34 147.1 168 56.0
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 9.8e-34 147.1 168 56.0
CSS0018496 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003638 1.7e-33 146.4 157 56.7
Lalb_Chr09g0335341 Lupinus albus HOM05D000216 ORTHO05D003638 1.7e-33 146.4 138 62.3
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 1.7e-33 146.4 162 56.8
CDE02G3154 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 3.7e-33 145.2 159 56.0
Gorai.005G105500 Gossypium raimondii HOM05D000216 ORTHO05D003638 4.9e-33 144.8 129 63.6
Ah.10g028520 Amaranthus hybridus HOM05D000216 ORTHO05D003638 8.3e-33 144.1 163 54.0
Mapoly0044s0072 Marchantia polymorpha HOM05D000216 ORTHO05D003638 1.4e-32 143.3 168 54.2
Psat7g038960 Pisum sativum HOM05D000216 ORTHO05D003638 2.4e-32 142.5 155 56.8
HanXRQChr00c0165g0572141 Helianthus annuus HOM05D000216 ORTHO05D003638 4.1e-32 141.7 102 75.5
Psat5g134680 Pisum sativum HOM05D000216 ORTHO05D003638 5.4e-32 141.4 160 56.9
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 7.0e-32 141.0 160 55.6
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 9.1e-32 140.6 102 75.5
Hma1.2p1_0414F.1_g147690 Hydrangea macrophylla HOM05D000216 ORTHO05D003638 1.2e-31 140.2 101 75.2
SGA_v2.0_scaffold95G28823 Striga asiatica HOM05D000216 ORTHO05D003638 2.7e-31 139.0 102 73.5
Gohir.D02G093150 Gossypium hirsutum HOM05D000216 ORTHO05D003638 7.7e-31 137.5 129 60.5
Solyc00g500335.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 1.0e-30 137.1 102 73.5
CAN.G63.18 Capsicum annuum HOM05D000216 ORTHO05D003638 2.3e-30 136.0 102 73.5
Sed0025462 Sechium edule HOM05D000216 ORTHO05D003638 2.9e-30 135.6 151 54.3
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 6.6e-30 134.4 102 73.5
HanXRQChr00c0560g0575801 Helianthus annuus HOM05D000216 ORTHO05D003638 3.3e-29 132.1 93 77.4
Lalb_Chr06g0172971 Lupinus albus HOM05D000216 ORTHO05D003638 4.2e-29 131.7 93 77.4
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.4e-27 126.7 107 68.2
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 4.0e-27 125.2 127 58.3
Migut.L00411 Erythranthe guttata HOM05D000216 ORTHO05D003638 6.8e-27 124.4 91 74.7
CAN.G229.14 Capsicum annuum HOM05D000216 ORTHO05D003638 2.0e-26 122.9 92 73.9
Hund20346 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.4e-26 121.7 100 67.0
arahy.Tifrunner.gnm1.ann1.M78D68 Arachis hypogaea HOM05D000216 ORTHO05D003638 2.2e-25 119.4 154 48.7
Lalb_Chr06g0173061 Lupinus albus HOM05D000216 ORTHO05D003638 2.4e-24 115.9 93 69.9
TPR.G8664 Trifolium pratense HOM05D000216 ORTHO05D003638 7.0e-24 114.4 103 65.0
Psat0s2288g0040 Pisum sativum HOM05D000216 ORTHO05D003638 1.2e-23 113.6 85 75.3
TPR.G8651 Trifolium pratense HOM05D000216 ORTHO05D003638 2.0e-23 112.8 103 63.1
Gorai.006G017100 Gossypium raimondii HOM05D000216 ORTHO05D003638 2.7e-23 112.5 91 65.9
CAN.G517.19 Capsicum annuum HOM05D000216 ORTHO05D003638 1.3e-22 110.2 84 72.6
Gorai.006G159100 Gossypium raimondii HOM05D000216 ORTHO05D003638 2.9e-22 109.0 107 61.7
Hund01856 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.9e-22 108.6 124 55.6
Gohir.D09G014950 Gossypium hirsutum HOM05D000216 ORTHO05D003638 1.5e-21 106.7 91 64.8
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 2.5e-21 105.9 123 53.7
Nn4g23650 Nelumbo nucifera HOM05D000216 ORTHO05D003638 2.5e-21 105.9 78 75.6
Psat2g044440 Pisum sativum HOM05D000216 ORTHO05D003518 1.2e-20 103.6 130 50.8
Gorai.005G029600 Gossypium raimondii HOM05D000216 ORTHO05D003638 3.6e-20 102.1 87 67.8
Gohir.D02G023550 Gossypium hirsutum HOM05D000216 ORTHO05D003638 8.0e-20 100.9 87 66.7
Medtr6g025340 Medicago truncatula HOM05D000216 ORTHO05D003638 1.0e-19 100.5 93 60.2
Medtr7g116680 Medicago truncatula HOM05D000216 ORTHO05D003638 1.4e-19 100.1 163 44.2
HanXRQChr13g0425811 Helianthus annuus HOM05D000216 ORTHO05D003638 1.8e-19 99.8 117 52.1
Sed0022034 Sechium edule HOM05D000216 ORTHO05D003638 2.0e-18 96.3 118 51.7
Hund01860 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.6e-18 95.9 115 53.9
Migut.D01339 Erythranthe guttata HOM05D000216 ORTHO05D003638 3.4e-18 95.5 70 74.3
Medtr5g022790 Medicago truncatula HOM05D001076 ORTHO05D001603 2.2e-17 92.8 92 63.0
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 4.9e-17 91.7 121 51.2
Lsat_1_v5_gn_3_17360 Lactuca sativa HOM05D000216 ORTHO05D003638 1.2e-15 87.0 136 47.1
HanXRQChr13g0425721 Helianthus annuus HOM05D000216 ORTHO05D003638 3.5e-15 85.5 57 78.9
Hund15942 Selenicereus undatus HOM05D000216 ORTHO05D003638 7.8e-15 84.3 136 44.1
Gohir.D04G020733 Gossypium hirsutum HOM05D000216 ORTHO05D003638 1.3e-14 83.6 72 69.4
arahy.Tifrunner.gnm1.ann1.TG7LSU Arachis hypogaea HOM05D000216 ORTHO05D003638 2.3e-14 82.8 85 60.0
HanXRQChr12g0380621 Helianthus annuus HOM05D000216 ORTHO05D003638 3.0e-14 82.4 103 48.5
Oeu022568.1 Olea europaea HOM05D000216 ORTHO05D003638 3.0e-14 82.4 106 48.1
Gorai.012G024800 Gossypium raimondii HOM05D000216 ORTHO05D003638 1.5e-13 80.1 72 72.2
TPR.G20776 Trifolium pratense HOM05D000216 ORTHO05D003638 2.5e-13 79.3 98 50.0
CAN.G993.7 Capsicum annuum HOM05D000216 ORTHO05D003638 7.3e-13 77.8 103 47.6
SMO086G0032 Selaginella moellendorffii HOM05D000216 ORTHO05D003638 9.5e-13 77.4 162 38.9
MD16G1100100 Malus domestica HOM05D000216 ORTHO05D003638 1.6e-12 76.6 102 47.1
Nitab4.5_0000559g0180 Nicotiana tabacum HOM05D000216 ORTHO05D028337 2.1e-12 76.3 110 55.5
Hund30593 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.2e-12 74.7 75 61.3
Phvul.001G151500 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 1.1e-11 73.9 69 60.9
Gohir.D08G103720 Gossypium hirsutum HOM05D000216 ORTHO05D003518 2.3e-11 72.8 75 57.3
Nitab4.5_0001140g0200 Nicotiana tabacum HOM05D000216 ORTHO05D003638 4.0e-11 72.0 57 70.2
Nitab4.5_0002175g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 1.2e-10 70.5 52 75.0
Oeu045559.1 Olea europaea HOM05D000216 ORTHO05D003518 1.5e-10 70.1 56 67.9
CAN.G1185.18 Capsicum annuum HOM05D000216 ORTHO05D003638 2.0e-10 69.7 103 43.7
PGSC0003DMG403017663 Solanum tuberosum HOM05D000216 ORTHO05D003518 6.4e-09 64.7 50 70.0
MD16G1263300 Malus domestica HOM05D000216 ORTHO05D003638 1.4e-08 63.5 41 80.5
Potri.019G028601 Populus trichocarpa HOM05D000216 ORTHO05D003638 2.4e-08 62.8 37 83.8
Lsat_1_v5_gn_4_50801 Lactuca sativa HOM05D000216 ORTHO05D010816 3.2e-08 62.4 39 84.6
Migut.C00051 Erythranthe guttata HOM05D000216 ORTHO05D003638 1.2e-07 60.5 41 78.0
Nitab4.5_0001639g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 2.1e-07 59.7 37 81.1
Eucgr.G00227 Eucalyptus grandis HOM05D000216 ORTHO05D003638 3.5e-07 58.9 89 47.2
MELO3C027395.2 Cucumis melo HOM05D000216 ORTHO05D003638 7.8e-07 57.8 39 76.9
Migut.D01337 Erythranthe guttata HOM05D000216 ORTHO05D003638 1.7e-06 56.6 86 41.9
Nitab4.5_0001015g0070 Nicotiana tabacum HOM05D000216 ORTHO05D003638 3.9e-06 55.5 119 37.8
Solyc08g028875.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 5.1e-06 55.1 37 75.7
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 6.6e-06 54.7 124 43.5
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 6.6e-06 54.7 124 43.5
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 6.6e-06 54.7 124 43.5
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 6.6e-06 54.7 124 43.5
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 6.6e-06 54.7 124 43.5


User provided reference genes

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