Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g067030 Medicago truncatula HOM05D000446 ORTHO05D258828 6.3e-73 277.3 139 100.0
Ca_13473_v3 Cicer arietinum L. HOM05D000446 ORTHO05D000321 7.8e-31 137.5 125 60.0
TPR.G36990 Trifolium pratense HOM05D000446 ORTHO05D000321 3.9e-30 135.2 125 60.8
Medtr5g030860 Medicago truncatula HOM05D000446 ORTHO05D000321 1.9e-29 132.9 125 58.4
Psat2g134000 Pisum sativum HOM05D000446 ORTHO05D000321 2.1e-28 129.4 125 56.8
Lj2g0008061 Lotus japonicus HOM05D000446 ORTHO05D000321 6.6e-22 107.8 125 47.2
VMungo1215G2810 Vigna mungo HOM05D000446 ORTHO05D000321 6.6e-22 107.8 125 48.0
Lalb_Chr09g0325751 Lupinus albus HOM05D000446 ORTHO05D000321 4.7e-20 101.7 125 45.6
arahy.Tifrunner.gnm1.ann1.AF8Y24 Arachis hypogaea HOM05D000446 ORTHO05D000321 8.1e-20 100.9 125 44.8
arahy.Tifrunner.gnm1.ann1.RDLU83 Arachis hypogaea HOM05D000446 ORTHO05D000321 8.1e-20 100.9 125 44.8
Phvul.002G142900 Phaseolus vulgaris HOM05D000446 ORTHO05D000321 1.8e-19 99.8 125 44.8
Medtr5g067010 Medicago truncatula HOM05D000446 ORTHO05D257883 2.1e-15 86.3 83 56.6
arahy.Tifrunner.gnm1.ann1.6Y4HS7 Arachis hypogaea HOM05D000446 ORTHO05D000321 8.7e-14 80.9 65 56.9
COL.COLO4_11676 Corchorus olitorius HOM05D000446 ORTHO05D000321 1.9e-13 79.7 125 36.8
GSVIVG01006776001 Vitis vinifera HOM05D000446 ORTHO05D000321 3.3e-13 79.0 119 35.3
MD01G1045300 Malus domestica HOM05D000446 ORTHO05D000321 7.3e-13 77.8 108 36.1
arahy.Tifrunner.gnm1.ann1.6NL4FR Arachis hypogaea HOM05D000446 ORTHO05D000321 1.6e-12 76.6 65 53.8
CSS0009108 Camellia sinensis var. sinensis HOM05D000446 ORTHO05D000321 1.6e-12 76.6 116 33.6
CSS0014600 Camellia sinensis var. sinensis HOM05D000446 ORTHO05D000321 1.6e-12 76.6 116 33.6
CSS0016764 Camellia sinensis var. sinensis HOM05D000446 ORTHO05D000321 1.6e-12 76.6 116 33.6
Cfa006827 Carpinus fangiana HOM05D000446 ORTHO05D000321 1.6e-12 76.6 122 34.4
Duzib147G0917 Durio zibethinus HOM05D000446 ORTHO05D000321 2.8e-12 75.9 125 36.0
Gohir.A11G209100 Gossypium hirsutum HOM05D000446 ORTHO05D000321 1.1e-11 73.9 109 35.8
Dinv36979 Davidia involucrata HOM05D000446 ORTHO05D000321 1.4e-11 73.6 67 49.3
Duzib264G1285 Durio zibethinus HOM05D000446 ORTHO05D000321 1.4e-11 73.6 69 47.8
Gohir.D11G214400 Gossypium hirsutum HOM05D000446 ORTHO05D000321 1.4e-11 73.6 109 36.7
Gorai.007G230000 Gossypium raimondii HOM05D000446 ORTHO05D000321 1.4e-11 73.6 109 36.7
Manes.13G104300 Manihot esculenta HOM05D000446 ORTHO05D000321 1.4e-11 73.6 110 36.4
Sabra01G0065300 Salix brachista HOM05D000446 ORTHO05D000321 1.4e-11 73.6 69 49.3
CANSAT01G2045 Cannabis sativa HOM05D000446 ORTHO05D000321 2.4e-11 72.8 122 32.8
Potri.001G089100 Populus trichocarpa HOM05D000446 ORTHO05D000321 3.1e-11 72.4 69 49.3
QL06p037463 Quercus lobata HOM05D000446 ORTHO05D000321 3.1e-11 72.4 122 36.1
Atru.chr3.1148 Acer truncatum HOM05D000446 ORTHO05D000321 5.3e-11 71.6 67 43.3
Atru.chr3.1167 Acer truncatum HOM05D000446 ORTHO05D000321 5.3e-11 71.6 67 43.3
ClCG01G018170 Citrullus lanatus HOM05D000446 ORTHO05D000321 6.9e-11 71.2 63 44.4
Haze_03935 Corylus avellana HOM05D000446 ORTHO05D000321 6.9e-11 71.2 107 36.4
Thecc.01G083500 Theobroma cacao HOM05D000446 ORTHO05D000321 6.9e-11 71.2 125 32.8
PGR102G1879 Punica granatum HOM05D000446 ORTHO05D000321 9.0e-11 70.9 64 48.4
Sed0017273 Sechium edule HOM05D000446 ORTHO05D000321 9.0e-11 70.9 63 44.4
CsaV3_6G044740 Cucumis sativus L. HOM05D000446 ORTHO05D000321 1.2e-10 70.5 69 42.0
Cpa.g.c33237.2 Carica papaya HOM05D000446 ORTHO05D000321 1.5e-10 70.1 119 31.1
Oeu050981.1 Olea europaea HOM05D000446 ORTHO05D000321 1.5e-10 70.1 63 50.8
MELO3C007695.2 Cucumis melo HOM05D000446 ORTHO05D000321 2.0e-10 69.7 67 41.8
Nitab4.5_0000291g0040 Nicotiana tabacum HOM05D000446 ORTHO05D000321 2.0e-10 69.7 115 32.2
Cc07_g07820 Coffea canephora HOM05D000446 ORTHO05D000321 2.6e-10 69.3 65 47.7
Prupe.6G210000 Prunus persica HOM05D000446 ORTHO05D000321 3.4e-10 68.9 63 50.8
FAN26G0288 Fragaria x ananassa HOM05D000446 ORTHO05D000321 4.4e-10 68.6 128 31.2
vmacro05518 Vaccinium macrocarpon HOM05D000446 ORTHO05D000321 4.4e-10 68.6 110 33.6
Eucgr.H02409 Eucalyptus grandis HOM05D000446 ORTHO05D000321 5.8e-10 68.2 63 44.4
FAN23G1323 Fragaria x ananassa HOM05D000446 ORTHO05D000321 5.8e-10 68.2 62 46.8
RcHm_v2.0_Chr2g0109951 Rosa chinensis HOM05D000446 ORTHO05D000321 5.8e-10 68.2 123 34.1
EL10Ac6g13301 Beta vulgaris HOM05D000446 ORTHO05D000321 7.6e-10 67.8 63 46.0
CAN.G1061.23 Capsicum annuum HOM05D000446 ORTHO05D000321 7.6e-10 67.8 63 46.0
Lj2C429G4 Lonicera japonica HOM05D000446 ORTHO05D000321 7.6e-10 67.8 65 46.2
Nn5g29767 Nelumbo nucifera HOM05D000446 ORTHO05D000321 7.6e-10 67.8 66 43.9
Nitab4.5_0002135g0070 Nicotiana tabacum HOM05D000446 ORTHO05D000321 1.3e-09 67.0 108 31.5
TWI77G1014 Tripterygium wilfordii HOM05D000446 ORTHO05D000321 1.3e-09 67.0 122 32.0
FAN28G1707 Fragaria x ananassa HOM05D000446 ORTHO05D000321 1.7e-09 66.6 128 31.2
Peaxi162Scf00703g00230 Petunia axillaris HOM05D000446 ORTHO05D000321 1.7e-09 66.6 116 31.9
Ah.03g134390 Amaranthus hybridus HOM05D000446 ORTHO05D000321 2.9e-09 65.9 63 44.4
AUR62005885 Chenopodium quinoa HOM05D000446 ORTHO05D000321 4.9e-09 65.1 63 42.9
SalBow3G2211 Salvia bowleyana HOM05D000446 ORTHO05D000321 6.4e-09 64.7 62 43.5
AUR62005884 Chenopodium quinoa HOM05D000446 ORTHO05D000321 8.4e-09 64.3 63 41.3
RhsimUnG0053800 Rhododendron simsii HOM05D000446 ORTHO05D000321 8.4e-09 64.3 115 33.0
RhsimUnG0146900 Rhododendron simsii HOM05D000446 ORTHO05D000321 8.4e-09 64.3 115 33.0
SGA_v2.0_scaffold149G36518 Striga asiatica HOM05D000446 ORTHO05D000321 8.4e-09 64.3 82 36.6
TAR628G0262 Trochodendron aralioides HOM05D000446 ORTHO05D000321 1.4e-08 63.5 63 42.9
Solyc02g091680.4 Solanum lycopersicum HOM05D000446 ORTHO05D000321 1.9e-08 63.2 63 41.3
Carub.0006s0904 Capsella rubella HOM05D000446 ORTHO05D000321 3.2e-08 62.4 61 39.3
Sp6g32870 Schrenkiella parvula HOM05D000446 ORTHO05D000321 3.2e-08 62.4 61 41.0
MSTRG.2788 Avicennia marina HOM05D000446 ORTHO05D000321 4.2e-08 62.0 61 44.3
HanXRQChr11g0324331 Helianthus annuus HOM05D000446 ORTHO05D000321 4.2e-08 62.0 141 33.3
Sc03g0000600 Simmondsia chinensis HOM05D000446 ORTHO05D000321 4.2e-08 62.0 62 40.3
Sopen02g036290 Solanum pennellii HOM05D000446 ORTHO05D000321 4.2e-08 62.0 63 39.7
CDE07G1451 Ceratophyllum demersum HOM05D000446 ORTHO05D000321 5.4e-08 61.6 62 45.2
C09p66340 Brassica napus HOM05D000446 ORTHO05D000321 7.1e-08 61.2 61 36.1
ECA232G3661 Erigeron canadensis HOM05D000446 ORTHO05D000321 7.1e-08 61.2 61 47.5
unitig_744.g24412 Utricularia gibba HOM05D000446 ORTHO05D000321 7.1e-08 61.2 66 40.9
PSO700G0032 Papaver somniferum HOM05D000446 ORTHO05D000321 9.3e-08 60.8 62 43.5
BcaB08g37091 Brassica carinata HOM05D000446 ORTHO05D000321 1.2e-07 60.5 61 37.7
Ciclev10024911m.g Citrus clementina HOM05D000446 ORTHO05D000321 1.2e-07 60.5 110 30.9
PGSC0003DMG400030662 Solanum tuberosum HOM05D000446 ORTHO05D000321 1.2e-07 60.5 63 41.3
Lsat_1_v5_gn_4_158221 Lactuca sativa HOM05D000446 ORTHO05D000321 1.6e-07 60.1 63 49.2
AT5G10560 Arabidopsis thaliana HOM05D000446 ORTHO05D000321 2.1e-07 59.7 61 36.1
MBI16_g44754_MAGBIO Magnolia biondii HOM05D000446 ORTHO05D000321 2.1e-07 59.7 62 43.5
A10p27020 Brassica napus HOM05D000446 ORTHO05D000321 4.6e-07 58.5 61 36.1
BraA10t44753Z Brassica rapa HOM05D000446 ORTHO05D000321 4.6e-07 58.5 61 36.1
AUR62032877 Chenopodium quinoa HOM05D000446 ORTHO05D000321 4.6e-07 58.5 53 45.3
Thhalv10012725m.g Eutrema salsugineum HOM05D000446 ORTHO05D000321 4.6e-07 58.5 61 37.7
Aa31LG3G16510 Aethionema arabicum HOM05D000446 ORTHO05D000321 6.0e-07 58.2 61 37.7
QL12p040004 Quercus lobata HOM05D000446 ORTHO05D000321 6.0e-07 58.2 61 41.0
CiPaw.08G057900 Carya illinoinensis HOM05D000446 ORTHO05D000321 7.9e-07 57.8 63 38.1
CARHR202740 Cardamine hirsuta HOM05D000446 ORTHO05D000321 1.0e-06 57.4 61 36.1
Haze_22504 Corylus avellana HOM05D000446 ORTHO05D000321 1.0e-06 57.4 63 41.3
Hund14166 Selenicereus undatus HOM05D000446 ORTHO05D000321 2.3e-06 56.2 61 45.9
MBI16_g44753_MAGBIO Magnolia biondii HOM05D000446 ORTHO05D000321 3.0e-06 55.8 62 40.3
Migut.H00296 Erythranthe guttata HOM05D000446 ORTHO05D000321 8.7e-06 54.3 63 39.7


User provided reference genes

Program Settings