Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g094450 Medicago truncatula HOM05D000051 ORTHO05D048911 6.9e-113 410.6 202 100.0
Medtr2g094750 Medicago truncatula HOM05D000051 ORTHO05D000015 8.9e-76 287.3 188 79.3
TPR.G39514 Trifolium pratense HOM05D000051 ORTHO05D000015 5.6e-46 188.3 193 54.4
TPR.G24740 Trifolium pratense HOM05D000051 ORTHO05D000015 7.6e-43 177.9 192 51.6
TPR.G8360 Trifolium pratense HOM05D000051 ORTHO05D000015 2.7e-40 169.5 190 50.0
TPR.G8057 Trifolium pratense HOM05D000051 ORTHO05D048911 9.6e-22 107.8 69 76.8
TPR.G22358 Trifolium pratense HOM05D000051 ORTHO05D000015 2.0e-19 100.1 186 41.9
Ca_03847_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 2.6e-19 99.8 172 44.2
Medtr7g023330 Medicago truncatula HOM05D000051 ORTHO05D000015 2.6e-19 99.8 198 38.4
Ca_03848_v3 Cicer arietinum L. HOM05D000051 ORTHO05D000015 5.8e-19 98.6 181 39.2
Medtr7g039630 Medicago truncatula HOM05D000051 ORTHO05D000015 4.9e-18 95.5 174 39.1
Lj3g0021941 Lotus japonicus HOM05D000051 ORTHO05D000015 1.4e-17 94.0 206 35.9
Medtr4g080773 Medicago truncatula HOM05D000051 ORTHO05D000015 6.0e-16 88.6 183 41.5
TPR.G22351 Trifolium pratense HOM05D000051 ORTHO05D000015 1.3e-15 87.4 172 39.0
Medtr4g080787 Medicago truncatula HOM05D000051 ORTHO05D000015 3.0e-15 86.3 181 40.3
Psat7g161840 Pisum sativum HOM05D000218 ORTHO05D000125 3.0e-15 86.3 209 34.9
Medtr3g048290 Medicago truncatula HOM05D000051 ORTHO05D000015 6.7e-15 85.1 178 38.8
Lj3g0004141 Lotus japonicus HOM05D000051 ORTHO05D000015 4.3e-14 82.4 171 39.2
Medtr7g023310 Medicago truncatula HOM05D000051 ORTHO05D000015 4.3e-14 82.4 170 40.0
HanXRQChr13g0407771 Helianthus annuus HOM05D000051 ORTHO05D000015 2.8e-13 79.7 174 37.9
TPR.G25974 Trifolium pratense HOM05D000051 ORTHO05D000015 2.8e-13 79.7 183 36.6
Psat7g162280 Pisum sativum HOM05D000051 ORTHO05D000015 6.2e-13 78.6 200 33.5
Medtr5g039970 Medicago truncatula HOM05D000051 ORTHO05D000015 4.1e-12 75.9 85 50.6
Medtr2g102420 Medicago truncatula HOM05D000051 ORTHO05D000015 6.9e-12 75.1 56 64.3
ECA240G4277 Erigeron canadensis HOM05D000051 ORTHO05D000015 2.2e-10 70.1 173 35.3
PGSC0003DMG401001040 Solanum tuberosum HOM05D000051 ORTHO05D000015 2.9e-10 69.7 178 30.3
QL08p012534 Quercus lobata HOM05D000051 ORTHO05D000015 5.0e-10 68.9 178 32.6
Medtr4g080807 Medicago truncatula HOM05D000051 ORTHO05D000015 1.1e-09 67.8 167 35.9
CSS0010373 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 1.9e-09 67.0 174 33.3
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 1.9e-09 67.0 168 33.3
CAN.G337.100 Capsicum annuum HOM05D000051 ORTHO05D000015 2.5e-09 66.6 178 30.9
QL08p012538 Quercus lobata HOM05D000051 ORTHO05D000015 2.5e-09 66.6 182 33.5
Sopen07g032410 Solanum pennellii HOM05D000051 ORTHO05D000015 3.2e-09 66.2 178 29.8
Medtr5g039950 Medicago truncatula HOM05D000051 ORTHO05D000015 4.2e-09 65.9 175 33.7
TPR.G8063 Trifolium pratense HOM05D000051 ORTHO05D000015 7.1e-09 65.1 68 52.9
Solyc07g064260.2 Solanum lycopersicum HOM05D000051 ORTHO05D000015 9.3e-09 64.7 179 30.2
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 1.2e-08 64.3 178 33.1
ECA236G0591 Erigeron canadensis HOM05D000051 ORTHO05D000015 1.2e-08 64.3 181 29.3
Medtr4g080590 Medicago truncatula HOM05D000051 ORTHO05D000015 1.2e-08 64.3 173 37.6
Rhsim04G0037500 Rhododendron simsii HOM05D000051 ORTHO05D000015 1.2e-08 64.3 206 28.6
CSS0034448 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 2.1e-08 63.5 175 33.7
Hma1.2p1_1609F.1_g293440 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 2.1e-08 63.5 174 34.5
Lj1A869T76 Lonicera japonica HOM05D000051 ORTHO05D000015 7.9e-08 61.6 175 31.4
Rhsim04G0001300 Rhododendron simsii HOM05D000051 ORTHO05D000015 7.9e-08 61.6 166 30.7
vmacro09405 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 7.9e-08 61.6 84 44.0
Medtr4g081030 Medicago truncatula HOM05D000051 ORTHO05D000015 1.3e-07 60.8 146 34.9
Medtr4g130200 Medicago truncatula HOM05D000051 ORTHO05D000015 2.3e-07 60.1 175 31.4
Oeu007604.1 Olea europaea HOM05D000051 ORTHO05D000015 3.9e-07 59.3 181 30.9
Aqoxy1G02688 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 5.1e-07 58.9 174 28.2
Peaxi162Scf00450g00852 Petunia axillaris HOM05D000051 ORTHO05D000015 5.1e-07 58.9 94 36.2
Aqoxy2G01134 Aquilegia oxysepala HOM05D000051 ORTHO05D000015 6.7e-07 58.5 174 31.6
Carub.0005s2592 Capsella rubella HOM05D000689 ORTHO05D000015 6.7e-07 58.5 190 31.1
Lsat_1_v5_gn_9_94060 Lactuca sativa HOM05D000051 ORTHO05D000015 6.7e-07 58.5 186 30.1
PSO210G0477 Papaver somniferum HOM05D000051 ORTHO05D000015 6.7e-07 58.5 177 34.5
CSS0018246 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 8.7e-07 58.2 91 35.2
Lsat_1_v5_gn_7_109401 Lactuca sativa HOM05D000051 ORTHO05D000015 3.3e-06 56.2 92 40.2
PSO063G7669 Papaver somniferum HOM05D000051 ORTHO05D000015 3.3e-06 56.2 176 29.5
Lsat_1_v5_gn_7_109361 Lactuca sativa HOM05D000051 ORTHO05D000015 5.7e-06 55.5 181 29.3
Rhsim04G0000300 Rhododendron simsii HOM05D000051 ORTHO05D000015 7.4e-06 55.1 83 37.3
Nitab4.5_0011608g0030 Nicotiana tabacum HOM05D000051 ORTHO05D000015 9.7e-06 54.7 94 34.0


User provided reference genes

Program Settings