Gene: Solyc07g064260.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g064260.2
  • Transcript Identifier Solyc07g064260.2.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 66306714-66310635 : positive

Gene Family Information

  • ID HOM05D000051
  • #Genes/#Species 4432/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g064260.2.1
  • uniprot K4CHA7
  • gene_id Solyc07g064260

Descriptions

  • Description F-box/RNI-like superfamily protein (AHRD V3.3 *** A0A2U1NFX9_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1901527
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway involved in stomatal movement AT1G55660
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT1G55660
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT3G42770
GO:0048587
ISO
PLAZA Integrative Orthologyregulation of short-day photoperiodism, flowering AT1G55660
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G53840
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT3G03040
GO:0009901
ISO
PLAZA Integrative Orthologyanther dehiscence AT3G62440
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering AT1G55660
GO:1902584
ISO
PLAZA Integrative Orthologypositive regulation of response to water deprivation AT1G55660
GO:0000209
ISO
PLAZA Integrative Orthologyprotein polyubiquitination AT3G42770
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT5G52460
GO:0010187
ISO
PLAZA Integrative Orthologynegative regulation of seed germination AT1G55660

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT3G42770

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G27050
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G11370
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G18770
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G27050
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT5G38590
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G25860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013101 Leucine-rich repeat 2
IPR036047 F-box-like domain superfamily
IPR001810 F-box domain
IPR032675 Leucine-rich repeat domain superfamily
Mapman id Description
35.1 not assigned.annotated