Gene: Lsat_1_v5_gn_9_94060

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_9_94060
  • Transcript Identifier Lsat_1_v5_gn_9_94060.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_9 : 146484126-146489793 : positive

Gene Family Information

  • ID HOM05D000051
  • #Genes/#Species 4432/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_9_94060.v5
  • pacid 38926407

Descriptions

  • Description PF00646//PF07723 - F-box domain (F-box) // Leucine Rich Repeat (LRR_2)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000209
ISO
PLAZA Integrative Orthologyprotein polyubiquitination AT3G42770
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT5G22720
GO:0009901
ISO
PLAZA Integrative Orthologyanther dehiscence AT3G62440
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT3G03040
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT3G42770

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT3G42770

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G27050
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G27050
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G47920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001810 F-box domain
IPR032675 Leucine-rich repeat domain superfamily
IPR036047 F-box-like domain superfamily
Mapman id Description
35.1 not assigned.annotated