Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 2.5e-109 399.4 318 100.0
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 5.3e-43 179.1 161 67.7
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 2.5e-40 170.2 160 66.9
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.7e-39 166.0 181 60.2
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 3.4e-37 159.8 161 63.4
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 1.1e-35 154.8 161 60.9
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 1.2e-34 151.4 161 60.2
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 1.3e-33 147.9 161 59.0
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 2.3e-33 147.1 144 63.9
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 7.2e-32 142.1 161 57.8
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 9.5e-32 141.7 161 57.1
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 2.1e-31 140.6 162 58.0
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 6.8e-30 135.6 162 56.2
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 2.0e-29 134.0 161 54.0
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 2.0e-29 134.0 161 54.0
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 4.4e-29 132.9 157 54.1
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 7.5e-29 132.1 162 54.9
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 2.8e-28 130.2 162 55.6
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 4.9e-28 129.4 188 48.9
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 6.3e-28 129.0 151 55.0
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.4e-27 127.9 158 54.4
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 2.4e-27 127.1 162 54.3
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 3.1e-27 126.7 170 51.8
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 7.0e-27 125.6 158 53.8
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 1.2e-26 124.8 146 54.1
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 2.0e-26 124.0 154 53.9
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.0e-26 124.0 162 53.7
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 2.7e-26 123.6 162 51.9
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 4.5e-26 122.9 162 50.6
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 4.5e-26 122.9 160 52.5
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 5.9e-26 122.5 157 54.8
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 5.9e-26 122.5 151 52.3
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 7.8e-26 122.1 161 49.7
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 1.0e-25 121.7 158 53.2
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 1.0e-25 121.7 149 56.4
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 2.3e-25 120.6 160 50.6
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 2.3e-25 120.6 134 57.5
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 2.3e-25 120.6 162 51.2
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 2.3e-25 120.6 151 51.7
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.9e-25 120.2 161 50.9
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 2.9e-25 120.2 162 50.6
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 3.9e-25 119.8 134 56.7
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 6.6e-25 119.0 158 53.8
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 6.6e-25 119.0 170 49.4
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 6.6e-25 119.0 156 51.9
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 8.6e-25 118.6 169 50.9
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.1e-24 118.2 144 53.5
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 1.1e-24 118.2 158 50.0
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.1e-24 118.2 158 53.2
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.1e-24 118.2 161 49.7
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 1.5e-24 117.9 162 51.2
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.5e-24 117.9 163 52.1
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 1.9e-24 117.5 161 50.3
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.9e-24 117.5 152 54.6
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 2.5e-24 117.1 153 51.6
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 2.5e-24 117.1 161 48.4
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 3.3e-24 116.7 162 51.9
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 3.3e-24 116.7 158 52.5
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 3.3e-24 116.7 163 52.1
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 3.3e-24 116.7 163 50.3
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 4.3e-24 116.3 160 48.8
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 5.6e-24 115.9 163 51.5
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 5.6e-24 115.9 163 50.9
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 7.3e-24 115.5 158 52.5
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 9.5e-24 115.2 171 49.7
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 9.5e-24 115.2 130 57.7
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 1.2e-23 114.8 130 58.5
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 1.2e-23 114.8 174 48.3
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 1.2e-23 114.8 171 49.1
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 1.6e-23 114.4 128 58.6
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 1.6e-23 114.4 160 51.2
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 2.8e-23 113.6 171 49.1
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.8e-23 113.6 171 49.1
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 3.6e-23 113.2 154 51.3
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 4.7e-23 112.8 154 51.9
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.7e-23 112.8 129 58.1
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 4.7e-23 112.8 157 51.6
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 4.7e-23 112.8 134 55.2
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 4.7e-23 112.8 138 53.6
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 6.1e-23 112.5 131 57.3
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 6.1e-23 112.5 132 56.8
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 6.1e-23 112.5 171 49.1
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 6.1e-23 112.5 160 52.5
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 8.0e-23 112.1 131 56.5
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 8.0e-23 112.1 134 56.0
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 8.0e-23 112.1 160 48.8
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 8.0e-23 112.1 130 56.9
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 1.0e-22 111.7 157 51.6
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.0e-22 111.7 149 49.7
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 1.0e-22 111.7 144 51.4
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 1.0e-22 111.7 115 60.0
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 1.4e-22 111.3 160 49.4
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.4e-22 111.3 166 47.6
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 1.4e-22 111.3 194 44.3
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 1.4e-22 111.3 158 49.4
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.8e-22 110.9 149 49.0
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.8e-22 110.9 116 57.8
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 2.3e-22 110.5 135 54.8
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 2.3e-22 110.5 131 55.7
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 2.3e-22 110.5 148 49.3
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 3.1e-22 110.2 160 47.5
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 3.1e-22 110.2 131 55.7
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 4.0e-22 109.8 154 50.6
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 4.0e-22 109.8 144 51.4
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 6.8e-22 109.0 161 46.6
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 6.8e-22 109.0 158 51.3
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 6.8e-22 109.0 156 49.4
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 1.2e-21 108.2 185 43.8
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 1.5e-21 107.8 168 46.4
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.6e-21 107.1 116 56.9
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 3.4e-21 106.7 130 53.8
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 3.4e-21 106.7 163 43.6
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 9.8e-21 105.1 107 59.8
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 9.8e-21 105.1 166 47.6
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 9.8e-21 105.1 138 48.6
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 8.3e-20 102.1 176 43.8
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 1.6e-18 97.8 167 43.1
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 7.8e-18 95.5 130 53.1
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.5e-16 91.3 158 47.5
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 1.5e-16 91.3 129 49.6
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 7.3e-16 89.0 159 41.5
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 1.2e-15 88.2 155 41.3
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 2.1e-15 87.4 164 40.2
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 4.7e-15 86.3 102 52.9
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 4.0e-14 83.2 124 46.8
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.2e-13 81.6 119 45.4
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 2.6e-13 80.5 105 48.6
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 9.8e-13 78.6 81 58.0
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 2.2e-12 77.4 131 44.3
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 4.9e-12 76.3 125 41.6
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.4e-11 72.8 52 73.1
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 2.1e-10 70.9 67 61.2
Ca_01133_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 6.0e-10 69.3 69 62.3
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 1.0e-09 68.6 159 36.5
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 4.3e-08 63.2 84 48.8
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 1.2e-07 61.6 45 68.9
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 3.6e-07 60.1 43 69.8
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 1.4e-06 58.2 112 35.7
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 1.4e-06 58.2 45 62.2
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.3e-06 57.4 202 29.7


User provided reference genes

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