Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g068945 Medicago truncatula HOM05D001545 ORTHO05D001600 7.0e-33 143.3 68 100.0
Medtr6g042060 Medicago truncatula HOM05D001545 ORTHO05D001600 1.1e-27 125.9 68 89.7
Medtr7g111710 Medicago truncatula HOM05D001545 ORTHO05D001600 2.5e-22 108.2 56 91.1
TPR.G1656 Trifolium pratense HOM05D001545 ORTHO05D001600 2.5e-22 108.2 56 91.1
arahy.Tifrunner.gnm1.ann1.766E3J Arachis hypogaea HOM05D001545 ORTHO05D001600 9.4e-22 106.3 56 89.3
arahy.Tifrunner.gnm1.ann1.TDW4P3 Arachis hypogaea HOM05D001545 ORTHO05D001600 9.4e-22 106.3 56 89.3
Glyma.03G229000 Glycine max HOM05D001545 ORTHO05D001600 9.4e-22 106.3 56 89.3
Glyma.19G226200 Glycine max HOM05D001545 ORTHO05D001600 9.4e-22 106.3 56 89.3
Psat0s3087g0080 Pisum sativum HOM05D001545 ORTHO05D001600 2.7e-21 104.8 56 89.3
Lj1g0019437 Lotus japonicus HOM05D001545 ORTHO05D001600 4.7e-21 104.0 56 87.5
Lalb_Chr15g0077731 Lupinus albus HOM05D001545 ORTHO05D001600 4.7e-21 104.0 56 87.5
Lalb_Chr18g0046161 Lupinus albus HOM05D001545 ORTHO05D001600 4.7e-21 104.0 56 87.5
Ca_09281_v3 Cicer arietinum L. HOM05D001545 ORTHO05D001600 6.1e-21 103.6 56 87.5
Phvul.001G223000 Phaseolus vulgaris HOM05D001545 ORTHO05D001600 6.1e-21 103.6 56 83.9
VMungo0720G1544 Vigna mungo HOM05D001545 ORTHO05D001600 8.0e-21 103.2 56 87.5
Psat7g216440 Pisum sativum HOM05D001545 ORTHO05D001600 1.0e-20 102.8 56 85.7
VMungo1383G3576 Vigna mungo HOM05D001545 ORTHO05D001600 2.3e-20 101.7 56 82.1
Phvul.007G204100 Phaseolus vulgaris HOM05D001545 ORTHO05D001600 6.8e-20 100.1 56 83.9
COL.COLO4_09790 Corchorus olitorius HOM05D001545 ORTHO05D001600 8.8e-20 99.8 56 82.1
CsaV3_1G037990 Cucumis sativus L. HOM05D001545 ORTHO05D001600 8.8e-20 99.8 56 82.1
Duzib170G0107 Durio zibethinus HOM05D001545 ORTHO05D001600 8.8e-20 99.8 56 82.1
Duzib213G0046 Durio zibethinus HOM05D001545 ORTHO05D001600 8.8e-20 99.8 56 82.1
Sp3g06040 Schrenkiella parvula HOM05D001545 ORTHO05D001600 1.5e-19 99.0 56 80.4
Gohir.D01G073800 Gossypium hirsutum HOM05D001545 ORTHO05D001600 2.0e-19 98.6 56 80.4
Lalb_Chr02g0147621 Lupinus albus HOM05D001545 ORTHO05D001600 2.0e-19 98.6 56 82.1
Manes.03G138000 Manihot esculenta HOM05D001545 ORTHO05D001600 2.0e-19 98.6 56 82.1
Prupe.6G306800 Prunus persica HOM05D001545 ORTHO05D001600 2.0e-19 98.6 56 82.1
RcHm_v2.0_Chr3g0458141 Rosa chinensis HOM05D001545 ORTHO05D001600 2.0e-19 98.6 56 82.1
Sed0003316 Sechium edule HOM05D001545 ORTHO05D001600 2.0e-19 98.6 56 80.4
Aa31sc104G40 Aethionema arabicum HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 78.6
AL3G18330 Arabidopsis lyrata HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 78.6
AT3G07100 Arabidopsis thaliana HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 78.6
Carub.0003s0661 Capsella rubella HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 78.6
CARHR081700 Cardamine hirsuta HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 78.6
Dinv07558 Davidia involucrata HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 82.1
Gohir.1Z049436 Gossypium hirsutum HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 82.1
Gorai.007G311200 Gossypium raimondii HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 82.1
THA.LOC104818954 Tarenaya hassleriana HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 78.6
Thecc.07G022100 Theobroma cacao HOM05D001545 ORTHO05D001600 2.6e-19 98.2 56 80.4
Migut.N02026 Erythranthe guttata HOM05D001545 ORTHO05D001600 3.4e-19 97.8 56 78.6
Manes.15G062800 Manihot esculenta HOM05D001545 ORTHO05D001600 3.4e-19 97.8 56 80.4
BcaB04g21312 Brassica carinata HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
BcaC05g29755 Brassica carinata HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
BcaC05g29839 Brassica carinata HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
BcaC09g47940 Brassica carinata HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
A03p35070 Brassica napus HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
A05p41100 Brassica napus HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
BNapus_Darmor_BZH_scaffold_109p00240 Brassica napus HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
C03p42650 Brassica napus HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
C05p60290 Brassica napus HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
BolC1t05569H Brassica oleracea HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
BolC5t34677H Brassica oleracea HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
BraA01t04397Z Brassica rapa HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
BraA03t12687Z Brassica rapa HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
BraA05t22837Z Brassica rapa HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
Thhalv10019975m.g Eutrema salsugineum HOM05D001545 ORTHO05D001600 4.4e-19 97.4 56 78.6
MELO3C015246.2 Cucumis melo HOM05D001545 ORTHO05D001600 5.7e-19 97.1 56 80.4
Gohir.A01G087500 Gossypium hirsutum HOM05D001545 ORTHO05D001600 5.7e-19 97.1 56 78.6
QL11p000130 Quercus lobata HOM05D001545 ORTHO05D001600 5.7e-19 97.1 56 80.4
Ciclev10007324m.g Citrus clementina HOM05D001545 ORTHO05D001600 7.5e-19 96.7 56 78.6
Haze_04016 Corylus avellana HOM05D001545 ORTHO05D001600 7.5e-19 96.7 56 80.4
FAN09G4170 Fragaria x ananassa HOM05D001545 ORTHO05D001600 7.5e-19 96.7 56 80.4
Medtr8g096550 Medicago truncatula HOM05D001545 ORTHO05D001600 7.5e-19 96.7 53 86.8
SGA_v2.0_scaffold1G00538 Striga asiatica HOM05D001545 ORTHO05D001600 7.5e-19 96.7 56 78.6
TWI75G0136 Tripterygium wilfordii HOM05D001545 ORTHO05D001600 7.5e-19 96.7 56 80.4
TWI79G1712 Tripterygium wilfordii HOM05D001545 ORTHO05D001600 7.5e-19 96.7 56 80.4
vmacro02615 Vaccinium macrocarpon HOM05D001545 ORTHO05D001600 7.5e-19 96.7 55 81.8
CSS0020759 Camellia sinensis var. sinensis HOM05D001545 ORTHO05D001600 9.7e-19 96.3 56 80.4
Cfa006741 Carpinus fangiana HOM05D001545 ORTHO05D001600 9.7e-19 96.3 56 80.4
CiPaw.07G034200 Carya illinoinensis HOM05D001545 ORTHO05D001600 9.7e-19 96.3 56 80.4
ECA236G2488 Erigeron canadensis HOM05D001545 ORTHO05D001600 9.7e-19 96.3 56 80.4
FvH4_6g08220 Fragaria vesca HOM05D001545 ORTHO05D001600 9.7e-19 96.3 56 80.4
FAN05G4742 Fragaria x ananassa HOM05D001545 ORTHO05D001600 9.7e-19 96.3 56 80.4
FAN14G3047 Fragaria x ananassa HOM05D001545 ORTHO05D001600 9.7e-19 96.3 56 80.4
Lsat_1_v5_gn_5_185281 Lactuca sativa HOM05D001545 ORTHO05D001600 9.7e-19 96.3 56 80.4
MD12G1201700 Malus domestica HOM05D001545 ORTHO05D001600 9.7e-19 96.3 56 80.4
Gohir.A04G009500 Gossypium hirsutum HOM05D001545 ORTHO05D001600 1.3e-18 95.9 56 80.4
Gorai.002G096700 Gossypium raimondii HOM05D001545 ORTHO05D001600 1.3e-18 95.9 56 78.6
Lj6A295T8 Lonicera japonica HOM05D001545 ORTHO05D001600 1.3e-18 95.9 56 80.4
Nn4g24975 Nelumbo nucifera HOM05D001545 ORTHO05D001600 1.3e-18 95.9 56 78.6
Oeu025770.1 Olea europaea HOM05D001545 ORTHO05D001600 1.3e-18 95.9 56 76.8
SalBow6G7103 Salvia bowleyana HOM05D001545 ORTHO05D001600 1.3e-18 95.9 56 78.6
Potri.010G211100 Populus trichocarpa HOM05D001545 ORTHO05D001600 1.7e-18 95.5 56 76.8
vmacro14886 Vaccinium macrocarpon HOM05D001545 ORTHO05D001600 1.7e-18 95.5 56 78.6
BolC3t16535H Brassica oleracea HOM05D001545 ORTHO05D001600 2.2e-18 95.1 56 76.8
CSS0043007 Camellia sinensis var. sinensis HOM05D001545 ORTHO05D001600 2.2e-18 95.1 56 78.6
CiPaw.08G152500 Carya illinoinensis HOM05D001545 ORTHO05D001600 2.2e-18 95.1 55 80.0
HanXRQChr01g0005691 Helianthus annuus HOM05D001545 ORTHO05D001600 2.2e-18 95.1 56 78.6
Lsat_1_v5_gn_8_93900 Lactuca sativa HOM05D001545 ORTHO05D001600 2.2e-18 95.1 56 78.6
Gohir.D05G378400 Gossypium hirsutum HOM05D001545 ORTHO05D001600 2.8e-18 94.7 56 80.4
PGR031G1330 Punica granatum HOM05D001545 ORTHO05D001600 2.8e-18 94.7 56 76.8
AUR62031536 Chenopodium quinoa HOM05D001545 ORTHO05D001600 3.7e-18 94.4 56 75.0
DCAR_002698 Daucus carota HOM05D001545 ORTHO05D001600 3.7e-18 94.4 56 76.8
Gorai.009G446300 Gossypium raimondii HOM05D001545 ORTHO05D001600 3.7e-18 94.4 56 78.6
Nn5g27591 Nelumbo nucifera HOM05D001545 ORTHO05D001600 3.7e-18 94.4 56 78.6
Sc02g0001200 Simmondsia chinensis HOM05D001545 ORTHO05D001600 3.7e-18 94.4 56 78.6
SGA_v2.0_scaffold138G35295 Striga asiatica HOM05D001545 ORTHO05D001600 3.7e-18 94.4 56 76.8
Ah.10g035790 Amaranthus hybridus HOM05D001545 ORTHO05D001600 4.8e-18 94.0 56 75.0
MSTRG.12546 Avicennia marina HOM05D001545 ORTHO05D001600 4.8e-18 94.0 56 76.8
Ah.16g104550 Amaranthus hybridus HOM05D001545 ORTHO05D001600 6.3e-18 93.6 56 75.0
EL10Ac2g04197 Beta vulgaris HOM05D001545 ORTHO05D001600 6.3e-18 93.6 56 73.2
Cpa.g.sc25.38 Carica papaya HOM05D001545 ORTHO05D001600 6.3e-18 93.6 55 76.4
PSO210G3790 Papaver somniferum HOM05D001545 ORTHO05D001600 6.3e-18 93.6 56 75.0
PSO832G2711 Papaver somniferum HOM05D001545 ORTHO05D001600 6.3e-18 93.6 56 75.0
Migut.D00353 Erythranthe guttata HOM05D001545 ORTHO05D001600 8.3e-18 93.2 56 76.8
HanXRQChr06g0164081 Helianthus annuus HOM05D001545 ORTHO05D001600 8.3e-18 93.2 56 76.8
Nitab4.5_0000235g0180 Nicotiana tabacum HOM05D001545 ORTHO05D001600 8.3e-18 93.2 56 73.2
Nitab4.5_0001877g0030 Nicotiana tabacum HOM05D001545 ORTHO05D001600 8.3e-18 93.2 56 73.2
TAR369G0406 Trochodendron aralioides HOM05D001545 ORTHO05D001600 8.3e-18 93.2 56 76.8
MD04G1188900 Malus domestica HOM05D001545 ORTHO05D001600 1.1e-17 92.8 56 76.8
MSTRG.18271 Avicennia marina HOM05D001545 ORTHO05D001600 1.4e-17 92.4 56 75.0
CANSAT64G0229 Cannabis sativa HOM05D001545 ORTHO05D001600 1.4e-17 92.4 56 76.8
DCAR_019429 Daucus carota HOM05D001545 ORTHO05D001600 1.4e-17 92.4 56 75.0
Peaxi162Scf00431g00311 Petunia axillaris HOM05D001545 ORTHO05D001600 1.4e-17 92.4 56 71.4
TAR633G2828 Trochodendron aralioides HOM05D001545 ORTHO05D001600 1.4e-17 92.4 56 76.8
Sabra10G0163300 Salix brachista HOM05D001545 ORTHO05D001600 1.8e-17 92.0 56 73.2
Sopen02g026880 Solanum pennellii HOM05D001545 ORTHO05D001600 1.8e-17 92.0 56 69.6
Atru.chr2.3606 Acer truncatum HOM05D001545 ORTHO05D001600 2.4e-17 91.7 56 75.0
Rhsim13G0029500 Rhododendron simsii HOM05D001545 ORTHO05D001600 2.4e-17 91.7 56 76.8
Solyc02g082220.3 Solanum lycopersicum HOM05D001545 ORTHO05D001600 2.4e-17 91.7 56 69.6
THA.LOC104802675 Tarenaya hassleriana HOM05D001545 ORTHO05D001600 2.4e-17 91.7 56 73.2
Sabra08G0036300 Salix brachista HOM05D001545 ORTHO05D001600 3.1e-17 91.3 56 73.2
GSVIVG01014261001 Vitis vinifera HOM05D001545 ORTHO05D001600 3.1e-17 91.3 56 75.0
ECA248G3342 Erigeron canadensis HOM05D001545 ORTHO05D001600 4.1e-17 90.9 56 73.2
Nitab4.5_0000855g0200 Nicotiana tabacum HOM05D001545 ORTHO05D001600 4.1e-17 90.9 56 69.6
Nitab4.5_0003141g0050 Nicotiana tabacum HOM05D001545 ORTHO05D001600 4.1e-17 90.9 56 71.4
Cc00_g08870 Coffea canephora HOM05D001545 ORTHO05D001600 5.3e-17 90.5 56 73.2
Cc11_g02760 Coffea canephora HOM05D001545 ORTHO05D001600 5.3e-17 90.5 56 73.2
Potri.008G049700 Populus trichocarpa HOM05D001545 ORTHO05D001600 7.0e-17 90.1 56 75.0
ATR1136G050 Amborella trichopoda HOM05D001545 ORTHO05D001600 9.1e-17 89.7 56 73.2
MSTRG.21524 Avicennia marina HOM05D001545 ORTHO05D001600 9.1e-17 89.7 56 75.0
PSO339G1365 Papaver somniferum HOM05D001545 ORTHO05D001600 9.1e-17 89.7 58 70.7
Peaxi162Scf00981g00314 Petunia axillaris HOM05D001545 ORTHO05D001600 9.1e-17 89.7 56 71.4
PGSC0003DMG401013636 Solanum tuberosum HOM05D001545 ORTHO05D001600 9.1e-17 89.7 56 69.6
TAR636G0666 Trochodendron aralioides HOM05D001545 ORTHO05D001600 9.1e-17 89.7 56 76.8
Eucgr.D00483 Eucalyptus grandis HOM05D001545 ORTHO05D001600 1.2e-16 89.4 56 73.2
CDE11G1130 Ceratophyllum demersum HOM05D001545 ORTHO05D001600 1.6e-16 89.0 56 67.9
Hund04502 Selenicereus undatus HOM05D001545 ORTHO05D001600 1.6e-16 89.0 56 73.2
PSO384G3344 Papaver somniferum HOM05D001545 ORTHO05D001600 2.7e-16 88.2 58 69.0
Os04g0129500 Oryza sativa ssp. japonica HOM05D001545 ORTHO05D001600 3.5e-16 87.8 56 67.9
SMO307G0046 Selaginella moellendorffii HOM05D001545 ORTHO05D001600 4.5e-16 87.4 56 69.6
CDE02G2954 Ceratophyllum demersum HOM05D001545 ORTHO05D001600 5.9e-16 87.0 56 66.1
AagrBONN_evm.TU.Sc2ySwM_369.225 Anthoceros agrestis HOM05D001545 ORTHO05D001600 1.3e-15 85.9 56 64.3
HPP92_018182 Vanilla planifolia HOM05D001545 ORTHO05D001600 1.7e-15 85.5 65 60.0
HPP92_015341 Vanilla planifolia HOM05D001545 ORTHO05D001600 6.5e-15 83.6 56 67.9
Pp3c1_17880 Physcomitrium patens HOM05D001545 ORTHO05D001600 8.5e-15 83.2 56 66.1
Mapoly0009s0042 Marchantia polymorpha HOM05D001545 ORTHO05D001600 1.5e-14 82.4 56 64.3
Pp3c2_16660 Physcomitrium patens HOM05D001545 ORTHO05D001600 2.5e-14 81.6 55 63.6
Zm00001eb088940 Zea mays HOM05D001545 ORTHO05D001600 4.2e-14 80.9 56 64.3
Zm00001eb419480 Zea mays HOM05D001545 ORTHO05D001600 1.2e-13 79.3 56 62.5
CBR_g52686 Chara braunii HOM05D001545 ORTHO05D000937 3.6e-13 77.8 56 64.3
Gohir.A11G277500 Gossypium hirsutum HOM05D001545 ORTHO05D001600 1.0e-12 76.3 42 81.0
Actinidia24925 Actinidia chinensis HOM05D001545 ORTHO05D001600 1.3e-10 69.3 44 68.2
CAN.G178.6 Capsicum annuum HOM05D001545 ORTHO05D001600 2.4e-09 65.1 43 67.4
FAN02G3334 Fragaria x ananassa HOM05D001545 ORTHO05D001600 2.4e-09 65.1 56 58.9
Cre02.g091150 Chlamydomonas reinhardtii HOM05D001545 ORTHO05D001600 7.0e-09 63.5 56 48.2
MCO01G512 Micromonas commoda HOM05D001545 ORTHO05D001600 2.7e-08 61.6 56 51.8
MCO01G513 Micromonas commoda HOM05D001545 ORTHO05D001600 2.7e-08 61.6 56 51.8
PRCOL_00001677 Prasinoderma coloniale HOM05D001545 ORTHO05D001600 4.2e-06 54.3 47 46.8


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