Gene: SGA_v2.0_scaffold138G35295
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold138G35295
- Transcript Identifier SGA_v2.0_scaffold138T35295
- Gene Type Coding gene
- Location scaffold138 : 745949-752406 : positive
Gene Family Information
- ID HOM05D001545
- #Genes/#Species 413/99
- Phylogenetic origin
- ID ORTHO05D001600
- #Genes/#Species 383/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product Transport protein Sec24
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0006888 | IEA | InterPro | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0048232 | ISO | PLAZA Integrative Orthology | male gamete generation | AT3G07100 |
| GO:0007030 | ISO | PLAZA Integrative Orthology | Golgi organization | AT3G07100 |
| GO:0008361 | ISO | PLAZA Integrative Orthology | regulation of cell size | AT3G07100 |
| GO:0007029 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum organization | AT3G07100 |
| GO:0032876 | ISO | PLAZA Integrative Orthology | negative regulation of DNA endoreduplication | AT3G07100 |
| GO:0080119 | ISO | PLAZA Integrative Orthology | ER body organization | AT3G07100 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G07100 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030127 | IEA | InterPro | COPII vesicle coat |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006895 | Zinc finger, Sec23/Sec24-type |
| IPR006900 | Sec23/Sec24, helical domain |
| IPR036174 | Zinc finger, Sec23/Sec24-type superfamily |
| IPR036175 | Sec23/Sec24 helical domain superfamily |
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR006896 | Sec23/Sec24, trunk domain |
| IPR012990 | Sec23/Sec24 beta-sandwich |
| IPR036180 | Gelsolin-like domain superfamily |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily |
| Mapman id | Description |
|---|---|
| 22.1.1.1.3.2 | Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec24 |