Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g013090 Medicago truncatula HOM05D003327 ORTHO05D030138 4.6e-101 371.7 211 100.0
Medtr1g012160 Medicago truncatula HOM05D003327 ORTHO05D030138 9.9e-64 247.7 195 77.4
Medtr1g012210 Medicago truncatula HOM05D003327 ORTHO05D030138 9.9e-64 247.7 195 77.4
Medtr3g008410 Medicago truncatula HOM05D003327 ORTHO05D030138 1.2e-32 144.4 196 55.6
Ca_26452_v3 Cicer arietinum L. HOM05D003327 ORTHO05D004535 2.0e-16 90.5 73 64.4
TPR.G8402 Trifolium pratense HOM05D003327 ORTHO05D004535 8.5e-15 85.1 73 61.6
Medtr7g068630 Medicago truncatula HOM05D003327 ORTHO05D004535 1.1e-14 84.7 73 60.3
Psat3g129480 Pisum sativum HOM05D003327 ORTHO05D004535 2.5e-14 83.6 73 61.6
Lj3g0008565 Lotus japonicus HOM05D003327 ORTHO05D004535 4.2e-14 82.8 73 61.6
arahy.Tifrunner.gnm1.ann1.2625MI Arachis hypogaea HOM05D003327 ORTHO05D004535 1.6e-13 80.9 92 52.2
arahy.Tifrunner.gnm1.ann1.HZLZ57 Arachis hypogaea HOM05D003327 ORTHO05D004535 2.7e-13 80.1 92 52.2
Glyma.12G203300 Glycine max HOM05D003327 ORTHO05D004535 6.1e-13 79.0 96 50.0
Glyma.13G298300 Glycine max HOM05D003327 ORTHO05D004535 8.0e-13 78.6 96 49.0
VMungo1080G1483 Vigna mungo HOM05D003327 ORTHO05D004535 4.0e-12 76.3 95 50.5
Phvul.005G104900 Phaseolus vulgaris HOM05D003327 ORTHO05D004535 2.0e-11 73.9 96 49.0
Prupe.8G033800 Prunus persica HOM05D003327 ORTHO05D004535 3.4e-11 73.2 73 52.1
RcHm_v2.0_Chr7g0226921 Rosa chinensis HOM05D003327 ORTHO05D004535 1.7e-10 70.9 75 56.0
MD17G1244100 Malus domestica HOM05D003327 ORTHO05D004535 2.2e-10 70.5 73 52.1
RcHm_v2.0_Chr5g0050851 Rosa chinensis HOM05D003327 ORTHO05D004535 6.3e-10 68.9 92 47.8
Prupe.3G157000 Prunus persica HOM05D003327 ORTHO05D004535 1.1e-09 68.2 73 50.7
FvH4_2g13420 Fragaria vesca HOM05D003327 ORTHO05D004535 1.8e-09 67.4 92 45.7
FAN15G1216 Fragaria x ananassa HOM05D003327 ORTHO05D004535 1.8e-09 67.4 92 45.7
FAN24G1643 Fragaria x ananassa HOM05D003327 ORTHO05D004535 1.8e-09 67.4 92 45.7
FAN27G1055 Fragaria x ananassa HOM05D003327 ORTHO05D004535 1.8e-09 67.4 92 45.7
FvH4_5g31520 Fragaria vesca HOM05D003327 ORTHO05D004535 4.1e-09 66.2 75 52.0
MD09G1251900 Malus domestica HOM05D003327 ORTHO05D004535 7.0e-09 65.5 73 50.7
Lalb_Chr22g0356511 Lupinus albus HOM05D003327 ORTHO05D004535 9.1e-09 65.1 65 55.4
MELO3C022275.2 Cucumis melo HOM05D003327 ORTHO05D004535 3.8e-07 59.7 73 46.6
CsaV3_6G008590 Cucumis sativus L. HOM05D003327 ORTHO05D004535 1.1e-06 58.2 73 46.6
PGR142G2878 Punica granatum HOM05D003327 ORTHO05D004535 1.9e-06 57.4 73 45.2
Migut.H01067 Erythranthe guttata HOM05D003327 ORTHO05D004535 2.5e-06 57.0 73 42.5
QL08p038229 Quercus lobata HOM05D003327 ORTHO05D004535 2.5e-06 57.0 74 41.9
ClCG06G002520 Citrullus lanatus HOM05D003327 ORTHO05D004535 4.2e-06 56.2 73 45.2
QL05p081739 Quercus lobata HOM05D003327 ORTHO05D004535 4.2e-06 56.2 74 41.9
TWI36G1653 Tripterygium wilfordii HOM05D003327 ORTHO05D004535 7.2e-06 55.5 71 42.3
Atru.chr6.3011 Acer truncatum HOM05D003327 ORTHO05D004535 9.4e-06 55.1 71 43.7
Solyc07g054200.4 Solanum lycopersicum HOM05D003327 ORTHO05D004535 9.4e-06 55.1 73 42.5


User provided reference genes

Program Settings