Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 7.1e-273 943.3 483 100.0
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 7.5e-89 332.0 490 40.4
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 1.1e-87 328.2 489 43.1
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 1.7e-80 304.3 499 38.1
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 2.2e-80 303.9 463 39.7
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 3.2e-79 300.1 461 38.8
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 9.2e-79 298.5 495 37.2
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 2.0e-78 297.4 464 38.6
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 2.7e-78 297.0 468 39.3
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 7.8e-78 295.4 499 37.3
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 1.1e-76 291.6 496 36.7
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 2.5e-76 290.4 463 38.7
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 4.3e-76 289.7 496 36.5
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 2.1e-75 287.3 460 37.2
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 2.8e-75 287.0 501 37.1
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 3.6e-75 286.6 461 37.3
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 1.4e-74 284.6 505 37.2
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.8e-74 284.3 471 37.2
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 5.2e-74 282.7 359 45.1
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 8.9e-74 282.0 493 37.3
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 8.9e-74 282.0 507 36.5
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 1.2e-73 281.6 489 37.4
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 1.5e-73 281.2 460 37.8
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 3.4e-73 280.0 462 37.9
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 3.4e-73 280.0 438 38.6
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 5.8e-73 279.3 493 36.5
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.3e-72 278.1 460 37.4
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 1.7e-72 277.7 470 36.4
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 2.2e-72 277.3 469 36.9
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 4.9e-72 276.2 460 37.0
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 6.4e-72 275.8 496 35.1
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 6.4e-72 275.8 491 37.1
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 1.1e-71 275.0 496 35.1
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 1.1e-71 275.0 462 37.9
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 1.9e-71 274.2 499 35.7
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 4.1e-71 273.1 531 35.8
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 7.1e-71 272.3 462 36.4
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 7.1e-71 272.3 511 34.8
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 9.2e-71 271.9 468 36.3
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 9.2e-71 271.9 464 36.4
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 1.6e-70 271.2 447 35.3
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 2.1e-70 270.8 488 35.9
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 2.7e-70 270.4 495 36.0
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 4.6e-70 269.6 462 38.5
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 6.0e-70 269.2 500 36.0
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 7.8e-70 268.9 503 35.4
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 7.8e-70 268.9 458 38.0
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 7.8e-70 268.9 468 36.1
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.3e-69 267.3 463 36.3
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.3e-69 267.3 413 39.5
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 2.3e-69 267.3 468 36.1
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 3.9e-69 266.5 462 36.8
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 5.1e-69 266.2 498 35.7
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 5.1e-69 266.2 498 35.7
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 5.1e-69 266.2 481 37.8
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.5e-68 264.6 494 36.0
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 3.3e-68 263.5 498 35.5
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 4.3e-68 263.1 462 34.4
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 4.3e-68 263.1 601 31.8
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 5.6e-68 262.7 440 37.0
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 7.3e-68 262.3 462 34.8
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 7.3e-68 262.3 425 38.8
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 9.5e-68 261.9 500 35.6
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 1.6e-67 261.2 462 37.0
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 6.2e-67 259.2 497 35.0
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 6.2e-67 259.2 494 35.8
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 8.1e-67 258.8 500 35.6
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 8.1e-67 258.8 517 35.0
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 1.4e-66 258.1 496 34.9
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 1.4e-66 258.1 521 34.4
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 2.3e-66 257.3 495 34.3
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.1e-66 256.9 491 35.0
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 4.0e-66 256.5 497 35.2
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 6.8e-66 255.8 465 35.3
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 1.2e-65 255.0 500 35.0
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 1.5e-65 254.6 467 35.1
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 3.4e-65 253.4 497 35.6
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 3.4e-65 253.4 476 36.1
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.8e-65 252.7 504 34.5
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 1.3e-64 251.5 498 34.9
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.7e-64 251.1 427 36.8
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 1.7e-64 251.1 443 37.2
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 4.9e-64 249.6 470 35.5
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 4.9e-64 249.6 463 35.2
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 6.4e-64 249.2 471 34.4
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 6.4e-64 249.2 502 32.7
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 1.1e-63 248.4 497 34.6
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 1.9e-63 247.7 499 33.7
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 3.2e-63 246.9 371 40.4
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 3.5e-62 243.4 500 34.2
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 6.0e-62 242.7 498 34.1
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 7.8e-62 242.3 512 34.0
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 2.3e-61 240.7 381 40.4
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 2.3e-61 240.7 419 37.7
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 1.9e-60 237.7 298 44.6
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 3.6e-59 233.4 496 34.9
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 1.4e-58 231.5 463 32.8
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 2.9e-56 223.8 467 33.8
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.4e-55 220.7 396 35.1
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 3.2e-55 220.3 300 40.7
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 6.0e-54 216.1 381 34.4
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 5.1e-53 213.0 393 34.9
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 3.3e-52 210.3 279 42.7
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 5.6e-52 209.5 387 35.9
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 5.6e-52 209.5 387 35.9
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 4.2e-47 193.4 388 33.2
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 9.3e-47 192.2 262 41.2
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 3.9e-45 186.8 448 29.5
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.3e-40 171.8 245 40.8
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 7.9e-38 162.5 356 33.1
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 1.1e-36 158.7 236 41.1
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 4.2e-31 140.2 437 27.9
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 6.2e-27 126.3 193 39.9
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 4.5e-25 120.2 494 26.9
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.6e-22 111.7 246 32.9
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 4.1e-18 97.1 176 35.8
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 4.1e-18 97.1 176 35.8
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.7e-16 91.7 97 44.3
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.2e-16 91.3 187 32.1
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 9.4e-15 85.9 161 35.4
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 2.3e-13 81.3 83 44.6
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 5.7e-12 76.6 186 34.4
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.0e-09 68.2 296 23.0
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 2.6e-09 67.8 199 30.7
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 2.9e-08 64.3 162 30.2
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.7e-06 57.8 131 27.5


User provided reference genes

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