Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0135s0034 Marchantia polymorpha HOM05D005801 ORTHO05D008555 0.0e+00 1154.4 629 100.0
Pp3c17_17180 Physcomitrium patens HOM05D005801 ORTHO05D008555 1.6e-91 341.3 355 54.1
Peaxi162Scf00720g00044 Petunia axillaris HOM05D005801 ORTHO05D008555 6.8e-82 309.3 342 49.1
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 5.7e-81 306.2 328 49.4
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 3.7e-80 303.5 338 49.4
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 3.7e-80 303.5 338 49.1
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 3.7e-80 303.5 313 51.4
Ciclev10007826m.g Citrus clementina HOM05D005801 ORTHO05D008555 4.9e-80 303.1 364 46.2
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 8.3e-80 302.4 342 50.3
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 8.3e-80 302.4 313 51.1
PGSC0003DMG400038162 Solanum tuberosum HOM05D005801 ORTHO05D008555 1.4e-79 301.6 332 51.2
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 5.4e-79 299.7 329 49.2
CiPaw.04G157900 Carya illinoinensis HOM05D005801 ORTHO05D008555 7.0e-79 299.3 329 48.0
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 7.0e-79 299.3 341 50.1
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 7.0e-79 299.3 338 48.8
TWI63G0976 Tripterygium wilfordii HOM05D005801 ORTHO05D008555 9.2e-79 298.9 340 49.1
ATR0681G166 Amborella trichopoda HOM05D005801 ORTHO05D008555 1.6e-78 298.1 335 48.4
Sopen05g014540 Solanum pennellii HOM05D005801 ORTHO05D008555 1.6e-78 298.1 345 49.6
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 2.0e-78 297.7 338 50.0
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 3.5e-78 297.0 330 49.1
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 3.5e-78 297.0 333 49.2
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 4.5e-78 296.6 338 50.0
CANSAT21G1751 Cannabis sativa HOM05D005801 ORTHO05D008555 5.9e-78 296.2 353 45.6
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 5.9e-78 296.2 351 46.7
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 5.9e-78 296.2 330 50.0
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 1.0e-77 295.4 360 48.1
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 1.3e-77 295.0 330 48.8
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 1.3e-77 295.0 336 46.7
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 1.7e-77 294.7 330 50.6
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 2.9e-77 293.9 369 45.3
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 2.9e-77 293.9 330 49.7
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 3.8e-77 293.5 330 48.8
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 5.0e-77 293.1 330 49.4
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 5.0e-77 293.1 356 48.6
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 6.6e-77 292.7 343 48.1
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 1.1e-76 292.0 330 50.9
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 1.1e-76 292.0 311 49.5
Sed0027809 Sechium edule HOM05D005801 ORTHO05D008555 2.5e-76 290.8 332 49.4
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 2.5e-76 290.8 433 43.0
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 2.5e-76 290.8 394 42.6
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 3.3e-76 290.4 365 43.8
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 4.3e-76 290.0 365 43.8
Solyc05g017990.4 Solanum lycopersicum HOM05D005801 ORTHO05D008555 4.3e-76 290.0 339 49.6
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 4.3e-76 290.0 418 43.1
C07p01810 Brassica napus HOM05D005801 ORTHO05D008555 5.6e-76 289.7 450 42.2
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 5.6e-76 289.7 331 48.0
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 9.5e-76 288.9 348 44.8
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 9.5e-76 288.9 331 49.5
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 1.2e-75 288.5 362 46.1
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.2e-75 288.5 329 46.5
MBI04_g34406_MAGBIO Magnolia biondii HOM05D005801 ORTHO05D008555 1.2e-75 288.5 376 46.3
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 1.6e-75 288.1 328 47.0
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 2.8e-75 287.3 361 47.9
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 2.8e-75 287.3 453 39.7
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 2.8e-75 287.3 353 46.5
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 2.8e-75 287.3 345 48.7
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.6e-75 287.0 359 44.8
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 4.7e-75 286.6 353 47.3
EL10Ac8g18377 Beta vulgaris HOM05D005801 ORTHO05D008555 6.1e-75 286.2 378 45.8
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 6.1e-75 286.2 477 40.9
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 8.0e-75 285.8 365 43.3
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 1.0e-74 285.4 475 40.0
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 1.4e-74 285.0 489 40.1
Aa31LG8G16820 Aethionema arabicum HOM05D005801 ORTHO05D008555 2.3e-74 284.3 356 44.7
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 3.0e-74 283.9 481 40.3
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 3.0e-74 283.9 481 40.3
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 3.0e-74 283.9 332 49.4
AT2G19870 Arabidopsis thaliana HOM05D005801 ORTHO05D008555 5.2e-74 283.1 479 40.7
AL3G48350 Arabidopsis lyrata HOM05D005801 ORTHO05D008555 6.8e-74 282.7 481 41.0
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 6.8e-74 282.7 478 40.6
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 6.8e-74 282.7 328 48.2
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 8.9e-74 282.3 472 40.3
Dinv36686 Davidia involucrata HOM05D005801 ORTHO05D008555 8.9e-74 282.3 324 47.8
MSTRG.10602 Avicennia marina HOM05D005801 ORTHO05D008555 1.2e-73 282.0 391 43.7
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 1.5e-73 281.6 442 41.0
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 2.0e-73 281.2 448 41.1
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 2.6e-73 280.8 330 47.3
Thhalv10002296m.g Eutrema salsugineum HOM05D005801 ORTHO05D008555 2.6e-73 280.8 486 39.9
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 4.4e-73 280.0 444 41.7
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 5.8e-73 279.6 474 40.7
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 5.8e-73 279.6 359 44.3
Sp3g33210 Schrenkiella parvula HOM05D005801 ORTHO05D008555 7.5e-73 279.3 474 39.7
Cpa.g.sc40.94 Carica papaya HOM05D005801 ORTHO05D008555 9.8e-73 278.9 297 50.2
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 9.8e-73 278.9 430 42.6
RcHm_v2.0_Chr2g0091911 Rosa chinensis HOM05D005801 ORTHO05D008555 1.7e-72 278.1 467 39.0
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 2.2e-72 277.7 447 40.3
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 4.9e-72 276.6 353 46.7
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 1.4e-71 275.0 473 40.0
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 4.1e-71 273.5 411 40.1
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 7.0e-71 272.7 299 50.2
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 7.0e-71 272.7 299 50.2
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 9.2e-71 272.3 437 42.8
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 4.6e-70 270.0 299 49.8
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 6.6e-69 266.2 478 37.7
unitig_46.g18397 Utricularia gibba HOM05D005801 ORTHO05D008555 3.3e-68 263.8 449 39.0
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 2.3e-66 257.7 260 51.9
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 7.5e-65 252.7 296 49.3
AUR62021403 Chenopodium quinoa HOM05D005801 ORTHO05D008555 9.2e-63 245.7 366 39.9
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 3.5e-62 243.8 247 53.4
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 5.0e-61 240.0 329 43.8
FvH4_1g06190 Fragaria vesca HOM05D005801 ORTHO05D008555 3.2e-55 220.7 174 58.0
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 1.1e-50 205.7 302 42.7
Cre13.g566150 Chlamydomonas reinhardtii HOM05D005801 ORTHO05D008555 7.1e-47 193.0 315 39.4
MCO03G539 Micromonas commoda HOM05D005801 ORTHO05D008555 7.8e-46 189.5 508 34.3
Lalb_Chr09g0331541 Lupinus albus HOM05D005801 ORTHO05D008555 1.2e-41 175.6 230 44.8
Lj6C67T4 Lonicera japonica HOM05D005801 ORTHO05D008555 3.4e-41 174.1 190 48.4
CAN.G640.23 Capsicum annuum HOM05D005801 ORTHO05D008555 1.6e-35 155.2 163 48.5
Os01g0742000 Oryza sativa ssp. japonica HOM05D005801 ORTHO05D008555 3.0e-29 134.4 164 50.6
CDE02G3237 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 2.5e-28 131.3 167 46.1
CAN.G775.15 Capsicum annuum HOM05D005801 ORTHO05D008555 1.5e-17 95.5 97 48.5
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 2.1e-14 85.1 218 28.9
HanXRQChr12g0378121 Helianthus annuus HOM05D005801 ORTHO05D008555 8.7e-13 79.7 110 40.0
CAN.G1277.2 Capsicum annuum HOM05D005801 ORTHO05D008555 3.1e-10 71.2 200 29.5
CAN.G77.3 Capsicum annuum HOM05D005801 ORTHO05D008555 3.6e-06 57.8 77 41.6


User provided reference genes

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