Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 1.3e-202 709.5 353 100.0
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 5.5e-97 358.6 336 54.8
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 5.5e-97 358.6 341 52.8
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 2.7e-96 356.3 299 58.2
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 2.7e-96 356.3 334 56.0
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 3.5e-96 355.9 291 60.5
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 6.0e-96 355.1 290 59.3
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 6.0e-96 355.1 324 57.4
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 1.3e-95 354.0 332 54.5
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 1.3e-95 354.0 332 54.5
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 2.3e-95 353.2 318 57.5
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 2.3e-95 353.2 230 71.3
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 5.1e-95 352.1 327 55.0
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 5.1e-95 352.1 325 57.5
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 8.7e-95 351.3 334 55.4
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 1.1e-94 350.9 291 61.2
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 1.1e-94 350.9 287 59.9
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.5e-94 350.5 314 59.9
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 1.9e-94 350.1 309 57.6
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 2.5e-94 349.7 309 58.6
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 2.5e-94 349.7 300 60.0
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 4.3e-94 349.0 291 60.5
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 5.7e-94 348.6 326 55.5
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 7.4e-94 348.2 286 59.1
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 7.4e-94 348.2 327 55.4
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 7.4e-94 348.2 312 56.7
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 1.3e-93 347.4 325 55.1
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 1.6e-93 347.1 236 68.6
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 1.6e-93 347.1 320 56.9
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 2.1e-93 346.7 302 59.3
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 2.1e-93 346.7 302 59.3
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.1e-93 346.7 281 60.1
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 2.8e-93 346.3 302 59.3
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 2.8e-93 346.3 302 59.3
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 2.8e-93 346.3 333 54.7
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 3.7e-93 345.9 260 63.5
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 3.7e-93 345.9 323 55.1
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 3.7e-93 345.9 330 54.2
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 8.2e-93 344.7 322 54.3
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 8.2e-93 344.7 300 59.0
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 8.2e-93 344.7 302 58.9
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 8.2e-93 344.7 328 54.6
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 1.1e-92 344.4 301 58.5
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 1.4e-92 344.0 341 51.6
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 1.4e-92 344.0 327 56.0
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 3.1e-92 342.8 317 54.6
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 5.3e-92 342.0 288 59.0
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 6.9e-92 341.7 320 55.3
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 6.9e-92 341.7 329 54.1
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 6.9e-92 341.7 318 56.9
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 9.0e-92 341.3 294 57.1
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 1.2e-91 340.9 303 58.4
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 1.2e-91 340.9 294 57.1
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 2.0e-91 340.1 329 54.7
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 2.6e-91 339.7 313 57.2
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 2.6e-91 339.7 294 57.1
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 3.4e-91 339.3 320 55.9
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 3.4e-91 339.3 301 57.8
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 4.5e-91 339.0 288 59.0
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 5.9e-91 338.6 315 54.9
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 1.0e-90 337.8 300 58.0
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 1.3e-90 337.4 319 54.2
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 1.3e-90 337.4 322 54.7
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 1.3e-90 337.4 287 59.2
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 1.7e-90 337.0 332 53.9
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 2.2e-90 336.7 231 68.8
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 2.2e-90 336.7 317 54.6
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 6.5e-90 335.1 332 53.9
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 6.5e-90 335.1 322 54.7
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 8.5e-90 334.7 351 52.1
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 8.5e-90 334.7 300 57.0
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 1.4e-89 334.0 312 56.4
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 1.9e-89 333.6 296 54.7
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 2.5e-89 333.2 287 58.5
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 2.5e-89 333.2 323 52.9
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 3.2e-89 332.8 313 55.6
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 4.2e-89 332.4 321 54.8
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 4.2e-89 332.4 260 61.2
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 5.5e-89 332.0 312 54.2
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 9.3e-89 331.3 292 57.2
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 9.3e-89 331.3 312 55.4
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 2.7e-88 329.7 321 54.5
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 3.6e-88 329.3 338 51.5
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 4.6e-88 328.9 339 52.5
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 1.8e-87 327.0 306 54.9
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.8e-87 327.0 312 53.2
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 2.3e-87 326.6 316 55.1
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 2.3e-87 326.6 316 55.1
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 2.3e-87 326.6 228 64.5
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 3.9e-87 325.9 313 54.6
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 1.5e-86 323.9 306 54.2
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 1.5e-86 323.9 322 52.5
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 4.3e-86 322.4 267 58.4
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 7.4e-86 321.6 231 63.2
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 1.6e-85 320.5 315 54.0
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 1.1e-84 317.8 314 52.5
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 1.4e-84 317.4 312 52.2
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.8e-84 317.0 218 66.1
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.4e-79 300.8 272 59.2
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.8e-71 273.9 346 46.2
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 6.7e-71 271.9 190 64.2
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 9.7e-70 268.1 319 48.0
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.1e-68 264.6 191 63.9
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 3.2e-65 253.1 180 64.4
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 3.2e-65 253.1 180 64.4
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 1.2e-59 234.6 198 58.6
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 1.7e-58 230.7 197 56.3
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 1.1e-57 228.0 226 54.4
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 4.2e-57 226.1 201 55.2
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 5.7e-46 189.1 152 60.5
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 8.9e-39 165.2 167 47.9
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 1.2e-22 111.7 78 61.5
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 2.4e-15 87.4 63 61.9
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 3.8e-13 80.1 132 37.9
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 6.2e-08 62.8 92 43.5
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 9.0e-07 58.9 53 56.6
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 1.5e-06 58.2 167 25.1
FvH4_1g01260 Fragaria vesca HOM05D003204 ORTHO05D003566 3.4e-06 57.0 173 27.2


User provided reference genes

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