Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0107s0026 Marchantia polymorpha HOM05D005817 ORTHO05D007140 1.8e-165 585.9 301 100.0
Pp3c10_3580 Physcomitrium patens HOM05D005817 ORTHO05D007140 4.4e-95 352.1 334 57.8
Actinidia01635 Actinidia chinensis HOM05D005817 ORTHO05D007140 6.3e-94 348.2 297 62.3
AagrBONN_evm.TU.Sc2ySwM_117.207 Anthoceros agrestis HOM05D005817 ORTHO05D007140 1.4e-93 347.1 301 63.1
Aqoxy6G00025 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 1.8e-93 346.7 307 61.6
Glyma.07G272500 Glycine max HOM05D005817 ORTHO05D007140 7.0e-93 344.7 297 61.6
Thecc.06G019900 Theobroma cacao HOM05D005817 ORTHO05D007140 2.6e-92 342.8 290 64.5
Gohir.D06G122800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 3.5e-92 342.4 290 63.1
Nn5g27184 Nelumbo nucifera HOM05D005817 ORTHO05D007140 4.5e-92 342.0 309 60.5
ATR1089G128 Amborella trichopoda HOM05D005817 ORTHO05D007140 5.9e-92 341.7 304 61.2
EL10Ac6g13990 Beta vulgaris HOM05D005817 ORTHO05D007140 1.0e-91 340.9 296 64.5
Gorai.010G142900 Gossypium raimondii HOM05D005817 ORTHO05D007140 1.0e-91 340.9 290 62.8
Duzib160G0844 Durio zibethinus HOM05D005817 ORTHO05D007140 1.7e-91 340.1 290 63.1
TAR628G1209 Trochodendron aralioides HOM05D005817 ORTHO05D007140 3.8e-91 339.0 309 62.5
Ca_13529_v3 Cicer arietinum L. HOM05D005817 ORTHO05D007140 5.0e-91 338.6 296 61.1
Phvul.003G075900 Phaseolus vulgaris HOM05D005817 ORTHO05D007140 6.5e-91 338.2 299 61.2
Gohir.A06G115800 Gossypium hirsutum HOM05D005817 ORTHO05D007140 1.1e-90 337.4 290 62.8
PGR142G3472 Punica granatum HOM05D005817 ORTHO05D007140 1.5e-90 337.0 299 62.2
CsaV3_5G027420 Cucumis sativus L. HOM05D005817 ORTHO05D007140 3.2e-90 335.9 293 61.8
TAR376G0556 Trochodendron aralioides HOM05D005817 ORTHO05D007140 3.2e-90 335.9 304 61.8
Prupe.1G585700 Prunus persica HOM05D005817 ORTHO05D007140 4.2e-90 335.5 302 60.6
QL02p103359 Quercus lobata HOM05D005817 ORTHO05D007140 4.2e-90 335.5 297 62.0
Psat4g000960 Pisum sativum HOM05D005817 ORTHO05D007140 5.5e-90 335.1 297 61.6
CSS0044256 Camellia sinensis var. sinensis HOM05D005817 ORTHO05D007140 9.4e-90 334.3 303 61.4
MD08G1248300 Malus domestica HOM05D005817 ORTHO05D007140 9.4e-90 334.3 302 60.6
THA.LOC104824089 Tarenaya hassleriana HOM05D005817 ORTHO05D007140 9.4e-90 334.3 297 62.6
Medtr4g134630 Medicago truncatula HOM05D005817 ORTHO05D007140 1.2e-89 334.0 296 61.1
TWI14G0757 Tripterygium wilfordii HOM05D005817 ORTHO05D007140 1.2e-89 334.0 299 59.2
CANSAT01G0715 Cannabis sativa HOM05D005817 ORTHO05D007140 2.7e-89 332.8 297 62.0
Lj4g0018327 Lotus japonicus HOM05D005817 ORTHO05D007140 2.7e-89 332.8 303 58.4
MD15G1443200 Malus domestica HOM05D005817 ORTHO05D007140 4.7e-89 332.0 309 60.2
Lalb_Chr07g0176811 Lupinus albus HOM05D005817 ORTHO05D007140 8.0e-89 331.3 300 60.3
Sp2g13800 Schrenkiella parvula HOM05D005817 ORTHO05D007140 8.0e-89 331.3 305 61.6
TPR.G6004 Trifolium pratense HOM05D005817 ORTHO05D007140 8.0e-89 331.3 296 60.5
COL.COLO4_31118 Corchorus olitorius HOM05D005817 ORTHO05D007140 1.0e-88 330.9 325 57.8
CDE07G1199 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.4e-88 330.5 296 60.5
Solyc01g103020.4 Solanum lycopersicum HOM05D005817 ORTHO05D007140 1.4e-88 330.5 299 60.9
BcaC06g31224 Brassica carinata HOM05D005817 ORTHO05D007140 3.0e-88 329.3 293 62.5
RcHm_v2.0_Chr7g0219661 Rosa chinensis HOM05D005817 ORTHO05D007140 5.2e-88 328.6 302 59.6
arahy.Tifrunner.gnm1.ann1.86KQ48 Arachis hypogaea HOM05D005817 ORTHO05D007140 6.7e-88 328.2 311 57.9
arahy.Tifrunner.gnm1.ann1.NEQE4P Arachis hypogaea HOM05D005817 ORTHO05D007140 6.7e-88 328.2 318 57.9
CAN.G855.54 Capsicum annuum HOM05D005817 ORTHO05D007140 6.7e-88 328.2 291 62.5
PSO017G5300 Papaver somniferum HOM05D005817 ORTHO05D007140 6.7e-88 328.2 303 60.4
AUR62043876 Chenopodium quinoa HOM05D005817 ORTHO05D007140 2.0e-87 326.6 286 63.6
Carub.0005s0157 Capsella rubella HOM05D005817 ORTHO05D007140 2.6e-87 326.2 302 60.9
Ah.03g136770 Amaranthus hybridus HOM05D005817 ORTHO05D007140 3.3e-87 325.9 321 57.6
Ciclev10002025m.g Citrus clementina HOM05D005817 ORTHO05D007140 3.3e-87 325.9 294 62.2
Atru.chr6.226 Acer truncatum HOM05D005817 ORTHO05D007140 4.4e-87 325.5 292 63.0
PSO170G5162 Papaver somniferum HOM05D005817 ORTHO05D007140 4.4e-87 325.5 303 59.7
PGSC0003DMG400020713 Solanum tuberosum HOM05D005817 ORTHO05D007140 4.4e-87 325.5 299 60.2
Nitab4.5_0007689g0010 Nicotiana tabacum HOM05D005817 ORTHO05D007140 5.7e-87 325.1 299 60.5
Cc02_g23610 Coffea canephora HOM05D005817 ORTHO05D007140 7.5e-87 324.7 294 61.9
Thhalv10004677m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 7.5e-87 324.7 303 60.4
A06p43560 Brassica napus HOM05D005817 ORTHO05D007140 9.7e-87 324.3 293 61.4
C07p33290 Brassica napus HOM05D005817 ORTHO05D007140 9.7e-87 324.3 293 61.8
BolC7t43840H Brassica oleracea HOM05D005817 ORTHO05D007140 9.7e-87 324.3 293 61.8
Oeu028475.1 Olea europaea HOM05D005817 ORTHO05D007140 1.7e-86 323.6 293 61.8
CDE08G0344 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 2.2e-86 323.2 296 59.5
HanXRQChr15g0469671 Helianthus annuus HOM05D005817 ORTHO05D007140 2.2e-86 323.2 307 60.6
Sed0006174 Sechium edule HOM05D005817 ORTHO05D007140 2.2e-86 323.2 302 58.6
Oeu028476.1 Olea europaea HOM05D005817 ORTHO05D007140 2.8e-86 322.8 293 61.8
Eucgr.I02797 Eucalyptus grandis HOM05D005817 ORTHO05D007140 4.8e-86 322.0 302 58.9
Lsat_1_v5_gn_9_83341 Lactuca sativa HOM05D005817 ORTHO05D007140 4.8e-86 322.0 306 61.4
Lj9C259G5 Lonicera japonica HOM05D001465 ORTHO05D001434 4.8e-86 322.0 288 62.2
Hma1.2p1_0052F.1_g030020 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 8.2e-86 321.2 305 59.7
CiPaw.06G176700 Carya illinoinensis HOM05D005817 ORTHO05D007140 2.4e-85 319.7 303 59.4
Rhsim05G0115500 Rhododendron simsii HOM05D005817 ORTHO05D007140 2.4e-85 319.7 353 53.5
AT2G02570 Arabidopsis thaliana HOM05D005817 ORTHO05D007140 3.1e-85 319.3 302 58.6
FAN18G1253 Fragaria x ananassa HOM05D005817 ORTHO05D007140 3.1e-85 319.3 304 57.6
FvH4_5g27830 Fragaria vesca HOM05D005817 ORTHO05D007140 9.1e-85 317.8 304 57.2
vmacro19830 Vaccinium macrocarpon HOM05D005817 ORTHO05D007140 1.2e-84 317.4 289 60.6
BcaC03g17157 Brassica carinata HOM05D005817 ORTHO05D007140 2.7e-84 316.2 299 59.2
SGA_v2.0_scaffold8G04460 Striga asiatica HOM05D005817 ORTHO05D007140 3.5e-84 315.8 306 60.1
GSVIVG01023145001 Vitis vinifera HOM05D005817 ORTHO05D007140 5.0e-83 312.0 263 63.9
Pp3c10_3582 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.1e-82 310.8 238 66.0
Sabra01G0174300 Salix brachista HOM05D005817 ORTHO05D007140 1.1e-82 310.8 316 56.0
Migut.N00865 Erythranthe guttata HOM05D005817 ORTHO05D007140 1.5e-82 310.5 305 58.0
BraA06t27241Z Brassica rapa HOM05D005817 ORTHO05D007140 2.5e-82 309.7 319 56.4
Hund15375 Selenicereus undatus HOM05D005817 ORTHO05D007140 4.2e-82 308.9 282 59.9
Glyma.17G001900 Glycine max HOM05D005817 ORTHO05D007140 5.5e-82 308.5 259 63.3
Pp3c1_22040 Physcomitrium patens HOM05D005817 ORTHO05D007140 1.2e-81 307.4 291 57.7
Manes.10G106400 Manihot esculenta HOM05D005817 ORTHO05D007140 3.6e-81 305.8 263 62.7
MBI06_g16620_MAGBIO Magnolia biondii HOM05D005817 ORTHO05D007140 6.8e-80 301.6 268 61.6
C02p50820 Brassica napus HOM05D005817 ORTHO05D007140 3.4e-79 299.3 299 58.5
Aa31LG2G7570 Aethionema arabicum HOM05D005817 ORTHO05D007140 1.3e-78 297.4 327 54.4
ECA236G3641 Erigeron canadensis HOM05D000284 ORTHO05D000805 2.8e-78 296.2 285 59.6
BolC2t11164H Brassica oleracea HOM05D005817 ORTHO05D007140 8.3e-78 294.7 302 57.6
AUR62032450 Chenopodium quinoa HOM05D005817 ORTHO05D007140 1.4e-77 293.9 224 67.9
ClCG11G000310 Citrullus lanatus HOM05D005817 ORTHO05D007140 7.0e-77 291.6 308 55.2
SMO117G0163 Selaginella moellendorffii HOM05D005817 ORTHO05D007140 7.0e-77 291.6 208 70.2
CBR_g40810 Chara braunii HOM05D005817 ORTHO05D007140 9.1e-77 291.2 353 50.7
Pp3c14_9240 Physcomitrium patens HOM05D005817 ORTHO05D007140 9.1e-77 291.2 293 58.7
Haze_09983 Corylus avellana HOM05D005817 ORTHO05D007140 3.5e-76 289.3 365 49.3
Peaxi162Scf00011g01920 Petunia axillaris HOM05D005817 ORTHO05D007140 3.5e-76 289.3 340 52.1
VMungo1215G1434 Vigna mungo HOM05D005817 ORTHO05D007140 3.5e-76 289.3 216 67.6
Manes.07G030600 Manihot esculenta HOM05D005817 ORTHO05D007140 4.5e-76 288.9 256 60.5
FAN04G1604 Fragaria x ananassa HOM05D005817 ORTHO05D007140 5.9e-76 288.5 372 47.0
Potri.004G229200 Populus trichocarpa HOM05D005817 ORTHO05D007140 5.9e-76 288.5 259 60.2
Sc03g0006230 Simmondsia chinensis HOM05D005817 ORTHO05D007140 2.9e-75 286.2 209 68.9
AL5G11840 Arabidopsis lyrata HOM05D005817 ORTHO05D007140 5.0e-75 285.4 266 59.0
Os08g0109900 Oryza sativa ssp. japonica HOM05D005817 ORTHO05D007140 5.0e-75 285.4 259 61.0
Lj5C284T7 Lonicera japonica HOM05D005817 ORTHO05D007140 1.5e-74 283.9 215 69.3
Dinv29679 Davidia involucrata HOM05D005817 ORTHO05D007140 3.3e-74 282.7 263 58.6
A02p33050 Brassica napus HOM05D005817 ORTHO05D007140 4.0e-72 275.8 257 60.3
unitig_22.g6849 Utricularia gibba HOM05D005817 ORTHO05D007140 1.2e-71 274.2 337 50.4
Sopen01g045430 Solanum pennellii HOM05D005817 ORTHO05D007140 7.5e-71 271.6 213 65.7
SHI04993 Sapria himalayana HOM05D005817 ORTHO05D007140 9.8e-71 271.2 330 46.7
FAN08G2336 Fragaria x ananassa HOM05D005817 ORTHO05D007140 1.7e-67 260.4 371 45.8
Duzib235G1547 Durio zibethinus HOM05D005817 ORTHO05D007140 1.6e-65 253.8 244 58.6
CDE04G1950 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 4.7e-65 252.3 250 57.6
Actinidia26194 Actinidia chinensis HOM05D005817 ORTHO05D007140 5.2e-64 248.8 308 52.3
Aqoxy385s001 Aquilegia oxysepala HOM05D005817 ORTHO05D007140 6.8e-64 248.4 307 49.8
BraA02t08326Z Brassica rapa HOM05D005817 ORTHO05D007140 8.9e-64 248.1 242 59.1
Nitab4.5_0003247g0070 Nicotiana tabacum HOM05D005817 ORTHO05D007140 2.0e-63 246.9 245 58.8
HPP92_002041 Vanilla planifolia HOM05D005817 ORTHO05D007140 6.4e-62 241.9 258 54.3
Hma1.2p1_0052F.1_g030010 Hydrangea macrophylla HOM05D005817 ORTHO05D007140 1.4e-61 240.7 192 67.2
Cpa.g.sc173.14 Carica papaya HOM05D005817 ORTHO05D007140 8.6e-59 231.5 245 54.3
CDE02G1227 Ceratophyllum demersum HOM05D005817 ORTHO05D007140 1.9e-58 230.3 288 48.3
Lalb_Chr12g0195861 Lupinus albus HOM05D005817 ORTHO05D007140 7.3e-58 228.4 173 68.8
RcHm_v2.0_Chr5g0068831 Rosa chinensis HOM05D005817 ORTHO05D007140 1.9e-50 203.8 145 71.0
MSTRG.27880 Avicennia marina HOM05D005817 ORTHO05D007140 8.1e-49 198.4 234 52.6
Zm00001eb174130 Zea mays HOM05D005817 ORTHO05D007140 2.3e-43 180.3 130 73.1
MSTRG.601 Avicennia marina HOM05D005817 ORTHO05D007140 2.4e-40 170.2 208 51.4
Dinv29634 Davidia involucrata HOM05D005817 ORTHO05D007140 5.3e-32 142.5 146 52.1
Cre02.g106550 Chlamydomonas reinhardtii HOM05D005817 ORTHO05D007140 2.8e-25 120.2 341 32.3
VMungo0766G0001 Vigna mungo HOM05D005817 ORTHO05D007140 1.4e-24 117.9 144 45.8
MCO12G229 Micromonas commoda HOM05D005817 ORTHO05D007140 4.0e-24 116.3 298 32.2
PRCOL_00002712 Prasinoderma coloniale HOM05D005817 ORTHO05D007140 3.5e-12 76.6 332 28.0
Mapoly0080s0036 Marchantia polymorpha HOM05D005817 ORTHO05D007140 1.1e-08 65.1 43 83.7
SEGI_07435 Sequoiadendron giganteum HOM05D005817 ORTHO05D007140 1.8e-08 64.3 66 50.0
Thhalv10005196m.g Eutrema salsugineum HOM05D005817 ORTHO05D007140 4.0e-08 63.2 64 57.8
FvH4_3g40414 Fragaria vesca HOM05D005817 ORTHO05D007140 6.9e-08 62.4 51 58.8
VMungo1148G0001 Vigna mungo HOM05D005817 ORTHO05D007140 7.6e-07 58.9 57 56.1


User provided reference genes

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