Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0100s0042 Marchantia polymorpha HOM05D003157 ORTHO05D004447 0.0e+00 1461.4 805 100.0
Pp3c7_8990 Physcomitrium patens HOM05D003157 ORTHO05D004447 1.4e-95 355.1 903 35.5
Pp3c11_16970 Physcomitrium patens HOM05D003157 ORTHO05D004447 1.1e-92 345.5 838 36.5
Mapoly0039s0051 Marchantia polymorpha HOM05D003157 ORTHO05D004447 1.4e-84 318.5 836 37.7
AagrBONN_evm.TU.Sc2ySwM_228.5109 Anthoceros agrestis HOM05D003157 ORTHO05D004447 1.6e-80 305.1 839 30.5
SEGI_11452 Sequoiadendron giganteum HOM05D003157 ORTHO05D004447 9.3e-76 289.3 803 31.3
unitig_37.g12746 Utricularia gibba HOM05D003157 ORTHO05D004447 3.9e-58 230.7 574 31.2
HPP92_024706 Vanilla planifolia HOM05D003157 ORTHO05D004447 5.7e-57 226.9 565 30.6
CDE02G1794 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 3.7e-56 224.2 790 27.6
BraA01t01537Z Brassica rapa HOM05D003157 ORTHO05D004447 4.8e-56 223.8 795 26.5
BolC1t01929H Brassica oleracea HOM05D003157 ORTHO05D004447 6.3e-56 223.4 805 27.0
A08p21390 Brassica napus HOM05D003157 ORTHO05D004447 3.1e-55 221.1 788 27.3
PSO111G0086 Papaver somniferum HOM05D003157 ORTHO05D004447 3.1e-55 221.1 867 28.4
BcaC09g50840 Brassica carinata HOM05D003157 ORTHO05D004447 9.0e-55 219.5 799 26.3
Carub.0007s1637 Capsella rubella HOM05D003157 ORTHO05D004447 1.5e-54 218.8 789 27.1
A01p16030 Brassica napus HOM05D003157 ORTHO05D004447 2.6e-54 218.0 796 26.3
AT4G24690 Arabidopsis thaliana HOM05D003157 ORTHO05D004447 4.5e-54 217.2 805 27.0
Haze_07584 Corylus avellana HOM05D003157 ORTHO05D004447 4.5e-54 217.2 910 26.5
CDE04G2303 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 5.9e-54 216.9 799 27.8
Peaxi162Scf00763g00430 Petunia axillaris HOM05D003157 ORTHO05D004447 7.7e-54 216.5 900 25.9
BraA08t34089Z Brassica rapa HOM05D003157 ORTHO05D004447 1.0e-53 216.1 783 27.1
AUR62008147 Chenopodium quinoa HOM05D003157 ORTHO05D004447 1.3e-53 215.7 881 25.8
Lsat_1_v5_gn_4_77240 Lactuca sativa HOM05D003157 ORTHO05D004447 1.3e-53 215.7 851 26.1
QL10p006899 Quercus lobata HOM05D003157 ORTHO05D004447 1.7e-53 215.3 880 26.5
C01p20020 Brassica napus HOM05D003157 ORTHO05D004447 2.2e-53 214.9 799 26.0
CiPaw.11G019800 Carya illinoinensis HOM05D003157 ORTHO05D004447 2.2e-53 214.9 574 29.3
PSO754G0123 Papaver somniferum HOM05D003157 ORTHO05D004447 2.2e-53 214.9 860 28.7
Solyc06g071770.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 2.9e-53 214.5 593 29.0
BolC8t48585H Brassica oleracea HOM05D003157 ORTHO05D004447 3.8e-53 214.2 803 26.3
Cc04_g11550 Coffea canephora HOM05D003157 ORTHO05D004447 5.0e-53 213.8 608 29.8
BolC7t45866H Brassica oleracea HOM05D003157 ORTHO05D004447 8.5e-53 213.0 811 26.6
BcaC07g38161 Brassica carinata HOM05D003157 ORTHO05D004447 1.1e-52 212.6 766 26.4
BraA03t14620Z Brassica rapa HOM05D003157 ORTHO05D004447 1.1e-52 212.6 792 26.6
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 1.4e-52 212.2 755 27.0
Cfa019214 Carpinus fangiana HOM05D003157 ORTHO05D004447 1.9e-52 211.8 907 26.0
Lj5A130T68 Lonicera japonica HOM05D003157 ORTHO05D004447 3.2e-52 211.1 571 29.6
CBR_g19475 Chara braunii HOM05D003157 ORTHO05D004447 4.2e-52 210.7 297 42.4
AUR62028729 Chenopodium quinoa HOM05D003157 ORTHO05D004447 4.2e-52 210.7 887 25.8
Sopen06g028060 Solanum pennellii HOM05D003157 ORTHO05D004447 7.2e-52 209.9 593 29.8
Migut.D01995 Erythranthe guttata HOM05D003157 ORTHO05D004447 9.4e-52 209.5 893 25.6
Peaxi162Scf00089g01334 Petunia axillaris HOM05D003157 ORTHO05D004447 9.4e-52 209.5 902 25.2
Aqoxy3G01217 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 1.2e-51 209.1 568 31.5
HPP92_006279 Vanilla planifolia HOM05D003157 ORTHO05D004447 1.2e-51 209.1 495 31.5
AL7G28510 Arabidopsis lyrata HOM05D003157 ORTHO05D004447 1.6e-51 208.8 814 25.8
vmacro16645 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 2.1e-51 208.4 892 26.1
Sp7g22680 Schrenkiella parvula HOM05D003157 ORTHO05D004447 2.7e-51 208.0 809 26.5
Manes.14G060700 Manihot esculenta HOM05D003157 ORTHO05D004447 3.6e-51 207.6 681 28.8
Sabra12G0061600 Salix brachista HOM05D003157 ORTHO05D004447 4.6e-51 207.2 858 27.4
FvH4_5g06270 Fragaria vesca HOM05D003157 ORTHO05D004447 6.1e-51 206.8 574 31.9
PGSC0003DMG400027073 Solanum tuberosum HOM05D003157 ORTHO05D004447 7.9e-51 206.5 590 27.6
Zm00001eb245950 Zea mays HOM05D003157 ORTHO05D004447 1.0e-50 206.1 602 28.2
Aa31LG4G9790 Aethionema arabicum HOM05D003157 ORTHO05D004447 1.4e-50 205.7 533 31.0
FAN13G0746 Fragaria x ananassa HOM05D003157 ORTHO05D004447 1.4e-50 205.7 573 31.9
EL10Ac5g10658 Beta vulgaris HOM05D003157 ORTHO05D004447 1.8e-50 205.3 901 25.4
ECA232G3241 Erigeron canadensis HOM05D003157 ORTHO05D004447 3.0e-50 204.5 943 25.9
SalBow6G1229 Salvia bowleyana HOM05D003157 ORTHO05D004447 3.0e-50 204.5 261 39.1
Manes.06G110100 Manihot esculenta HOM05D003157 ORTHO05D004447 5.1e-50 203.8 585 28.5
CARHR232070 Cardamine hirsuta HOM05D003157 ORTHO05D004447 6.7e-50 203.4 809 26.1
Thhalv10024557m.g Eutrema salsugineum HOM05D003157 ORTHO05D004447 6.7e-50 203.4 546 29.7
Ca_14277_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 1.5e-49 202.2 324 36.7
arahy.Tifrunner.gnm1.ann1.RZMV9E Arachis hypogaea HOM05D003157 ORTHO05D004447 2.5e-49 201.4 257 40.1
vmacro19300 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 4.3e-49 200.7 311 36.0
arahy.Tifrunner.gnm1.ann1.UDW2C6 Arachis hypogaea HOM05D003157 ORTHO05D004447 5.7e-49 200.3 257 40.1
CANSAT80G2678 Cannabis sativa HOM05D003157 ORTHO05D004447 5.7e-49 200.3 864 25.8
Nitab4.5_0010452g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 9.7e-49 199.5 532 31.2
MSTRG.11494 Avicennia marina HOM05D003157 ORTHO05D004447 1.7e-48 198.7 585 28.7
A03p55470 Brassica napus HOM05D003157 ORTHO05D004447 1.7e-48 198.7 808 26.4
FAN04G1965 Fragaria x ananassa HOM05D003157 ORTHO05D004447 1.7e-48 198.7 579 31.1
Potri.015G084000 Populus trichocarpa HOM05D003157 ORTHO05D004447 1.7e-48 198.7 587 29.0
Dinv20600 Davidia involucrata HOM05D003157 ORTHO05D004447 2.2e-48 198.4 256 41.4
ClCG01G013500 Citrullus lanatus HOM05D003157 ORTHO05D004447 2.8e-48 198.0 323 36.8
MD14G1171800 Malus domestica HOM05D003157 ORTHO05D004447 3.7e-48 197.6 579 30.7
Sabra15G0107200 Salix brachista HOM05D003157 ORTHO05D004447 4.8e-48 197.2 725 27.4
HanXRQChr10g0296081 Helianthus annuus HOM05D003157 ORTHO05D004447 6.3e-48 196.8 926 25.8
Rhsim12G0167900 Rhododendron simsii HOM05D003157 ORTHO05D004447 6.3e-48 196.8 885 25.6
Solyc03g112230.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 8.2e-48 196.4 275 39.6
TWI23G0818 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 8.2e-48 196.4 872 26.0
CAN.G338.32 Capsicum annuum HOM05D003157 ORTHO05D004447 1.1e-47 196.1 292 39.7
Eucgr.K02800 Eucalyptus grandis HOM05D003157 ORTHO05D004447 1.1e-47 196.1 407 32.9
HanXRQChr16g0504701 Helianthus annuus HOM05D003157 ORTHO05D004447 1.1e-47 196.1 536 29.1
Ah.11g051160 Amaranthus hybridus HOM05D003157 ORTHO05D004447 1.4e-47 195.7 884 25.2
CSS0041144 Camellia sinensis var. sinensis HOM05D003157 ORTHO05D004447 1.4e-47 195.7 284 38.4
C07p53750 Brassica napus HOM05D003157 ORTHO05D004447 1.8e-47 195.3 613 28.2
Sopen03g031330 Solanum pennellii HOM05D003157 ORTHO05D004447 2.4e-47 194.9 301 37.2
TAR371G0612 Trochodendron aralioides HOM05D003157 ORTHO05D004447 2.4e-47 194.9 524 29.8
Dinv38527 Davidia involucrata HOM05D003157 ORTHO05D004447 3.1e-47 194.5 310 37.4
FAN08G1011 Fragaria x ananassa HOM05D003157 ORTHO05D004447 3.1e-47 194.5 576 32.3
Lalb_Chr07g0182971 Lupinus albus HOM05D003157 ORTHO05D004447 3.1e-47 194.5 243 39.9
CAN.G993.20 Capsicum annuum HOM05D003157 ORTHO05D004447 4.1e-47 194.1 600 28.2
Nn3g16701 Nelumbo nucifera HOM05D003157 ORTHO05D004447 4.1e-47 194.1 253 40.3
Thecc.03G025700 Theobroma cacao HOM05D003157 ORTHO05D004447 4.1e-47 194.1 695 28.2
Os02g0593700 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 5.3e-47 193.7 524 28.4
RcHm_v2.0_Chr7g0192591 Rosa chinensis HOM05D003157 ORTHO05D004447 6.9e-47 193.4 854 26.0
Oeu020884.3 Olea europaea HOM05D003157 ORTHO05D004447 9.1e-47 193.0 538 29.0
PGSC0003DMG400018122 Solanum tuberosum HOM05D003157 ORTHO05D004447 9.1e-47 193.0 256 41.0
Sc12g0005010 Simmondsia chinensis HOM05D003157 ORTHO05D004447 1.2e-46 192.6 890 25.3
Potri.012G085700 Populus trichocarpa HOM05D003157 ORTHO05D004447 1.5e-46 192.2 869 26.2
PGR044G1972 Punica granatum HOM05D003157 ORTHO05D004447 2.0e-46 191.8 580 28.6
THA.LOC104809775 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 2.0e-46 191.8 833 26.1
FAN18G2672 Fragaria x ananassa HOM05D003157 ORTHO05D004447 2.6e-46 191.4 300 40.3
Lj9A442T64 Lonicera japonica HOM05D003157 ORTHO05D004447 2.6e-46 191.4 523 30.8
Nitab4.5_0001793g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 2.6e-46 191.4 536 30.8
MD06G1165900 Malus domestica HOM05D003157 ORTHO05D004447 3.4e-46 191.0 605 27.9
Atru.chr9.2575 Acer truncatum HOM05D003157 ORTHO05D004447 4.5e-46 190.7 296 38.2
Gorai.007G046900 Gossypium raimondii HOM05D003157 ORTHO05D004447 5.9e-46 190.3 893 24.7
TWI14G1342 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 5.9e-46 190.3 876 25.6
Actinidia08960 Actinidia chinensis HOM05D003157 ORTHO05D004447 7.7e-46 189.9 882 24.8
Ciclev10024152m.g Citrus clementina HOM05D003157 ORTHO05D004447 7.7e-46 189.9 900 26.3
Rhsim08G0177500 Rhododendron simsii HOM05D003157 ORTHO05D004447 1.0e-45 189.5 300 36.3
Gohir.A11G040300 Gossypium hirsutum HOM05D003157 ORTHO05D004447 1.3e-45 189.1 890 25.2
Prupe.5G165800 Prunus persica HOM05D003157 ORTHO05D004447 1.3e-45 189.1 889 28.1
Glyma.17G084700 Glycine max HOM05D003157 ORTHO05D004447 3.8e-45 187.6 316 34.5
THA.LOC104825177 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 3.8e-45 187.6 569 28.5
TPR.G37494 Trifolium pratense HOM05D003157 ORTHO05D004447 3.8e-45 187.6 530 28.5
DCAR_016024 Daucus carota HOM05D003157 ORTHO05D004447 5.0e-45 187.2 539 30.1
Glyma.05G041600 Glycine max HOM05D003157 ORTHO05D004447 5.0e-45 187.2 322 36.6
Lj4g0014353 Lotus japonicus HOM05D003157 ORTHO05D004447 5.0e-45 187.2 243 41.6
Medtr4g104880 Medicago truncatula HOM05D003157 ORTHO05D004447 6.5e-45 186.8 243 41.2
MSTRG.9691 Avicennia marina HOM05D003157 ORTHO05D004447 8.5e-45 186.4 247 39.7
ClCG03G002990 Citrullus lanatus HOM05D003157 ORTHO05D004447 8.5e-45 186.4 528 30.1
DCAR_021588 Daucus carota HOM05D003157 ORTHO05D004447 1.1e-44 186.0 714 25.6
Gohir.D11G043500 Gossypium hirsutum HOM05D003157 ORTHO05D004447 1.1e-44 186.0 891 24.8
Lalb_Chr13g0297581 Lupinus albus HOM05D003157 ORTHO05D004447 1.4e-44 185.7 243 39.9
BcaC06g32868 Brassica carinata HOM05D003157 ORTHO05D004447 1.9e-44 185.3 308 36.0
Sed0005003 Sechium edule HOM05D003157 ORTHO05D004447 1.9e-44 185.3 591 28.3
SHI17273 Sapria himalayana HOM05D003157 ORTHO05D004447 2.5e-44 184.9 262 37.0
Hund02785 Selenicereus undatus HOM05D003157 ORTHO05D004447 3.2e-44 184.5 578 27.2
CsaV3_1G008830 Cucumis sativus L. HOM05D003157 ORTHO05D004447 4.2e-44 184.1 871 25.9
COL.COLO4_36761 Corchorus olitorius HOM05D003157 ORTHO05D004447 1.6e-43 182.2 288 37.8
Sed0026079 Sechium edule HOM05D003157 ORTHO05D004447 2.1e-43 181.8 838 25.4
TAR629G0508 Trochodendron aralioides HOM05D003157 ORTHO05D004447 3.6e-43 181.0 246 39.8
Lalb_Chr12g0201891 Lupinus albus HOM05D003157 ORTHO05D004447 4.7e-43 180.6 311 35.0
Gorai.003G115800 Gossypium raimondii HOM05D003157 ORTHO05D004447 6.1e-43 180.3 880 24.7
Psat4g060880 Pisum sativum HOM05D003157 ORTHO05D004447 6.1e-43 180.3 550 28.4
Phvul.003G205000 Phaseolus vulgaris HOM05D003157 ORTHO05D004447 1.4e-42 179.1 243 39.1
Gohir.A03G056900 Gossypium hirsutum HOM05D003157 ORTHO05D004447 2.3e-42 178.3 877 24.4
Nitab4.5_0008713g0020 Nicotiana tabacum HOM05D003157 ORTHO05D004447 3.9e-42 177.6 275 36.0
Nitab4.5_0000003g0820 Nicotiana tabacum HOM05D003157 ORTHO05D004447 8.8e-42 176.4 924 23.9
DCAR_026172 Daucus carota HOM05D003157 ORTHO05D004447 2.6e-41 174.9 247 36.8
MELO3C002297.2 Cucumis melo HOM05D003157 ORTHO05D004447 4.4e-41 174.1 318 35.2
Potri.012G085450 Populus trichocarpa HOM05D003157 ORTHO05D004447 4.4e-41 174.1 285 34.7
Gohir.D03G106700 Gossypium hirsutum HOM05D003157 ORTHO05D004447 5.7e-41 173.7 881 24.0
VMungo1215G0567 Vigna mungo HOM05D003157 ORTHO05D004447 5.7e-41 173.7 324 35.2
GSVIVG01007647001 Vitis vinifera HOM05D003157 ORTHO05D004447 2.8e-40 171.4 286 37.1
ATR0824G119 Amborella trichopoda HOM05D003157 ORTHO05D004447 6.3e-40 170.2 886 24.6
SGA_v2.0_scaffold7G04161 Striga asiatica HOM05D003157 ORTHO05D004447 8.2e-40 169.9 303 33.0
Os04g0476800 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 5.3e-39 167.2 246 37.0
SGA_v2.0_scaffold114G31812 Striga asiatica HOM05D003157 ORTHO05D004447 3.8e-37 161.0 322 33.2
Mapoly0039s0050 Marchantia polymorpha HOM05D003157 ORTHO05D004447 5.0e-37 160.6 309 34.0
COL.COLO4_24272 Corchorus olitorius HOM05D003157 ORTHO05D004447 6.1e-35 153.7 588 26.0
Mapoly0039s0049 Marchantia polymorpha HOM05D003157 ORTHO05D011370 2.4e-31 141.7 287 32.4
SMO132G0003 Selaginella moellendorffii HOM05D003157 ORTHO05D004447 3.1e-31 141.4 120 55.8
Oeu040857.2 Olea europaea HOM05D003157 ORTHO05D004447 9.1e-31 139.8 343 30.3
Actinidia08033 Actinidia chinensis HOM05D000048 ORTHO05D004447 1.2e-30 139.4 507 25.6
Actinidia24597 Actinidia chinensis HOM05D003157 ORTHO05D004447 2.6e-30 138.3 497 25.6
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 1.2e-27 129.4 112 51.8
Oeu023452.2 Olea europaea HOM05D003157 ORTHO05D004447 6.1e-27 127.1 253 33.6
Cpa.g.sc159.27 Carica papaya HOM05D003157 ORTHO05D004447 1.0e-26 126.3 105 52.4
Aqoxy3G02978 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 1.2e-22 112.8 116 44.8
Migut.O00156 Erythranthe guttata HOM05D003157 ORTHO05D004447 5.9e-22 110.5 163 34.4
Dinv15230 Davidia involucrata HOM05D003157 ORTHO05D004447 4.7e-19 100.9 221 28.5
Prupe.5G165900 Prunus persica HOM05D003157 ORTHO05D012168 2.3e-18 98.6 289 29.8
SGA_v2.0_scaffold25G10800 Striga asiatica HOM05D003157 ORTHO05D004447 2.0e-17 95.5 268 28.0
Migut.O00157 Erythranthe guttata HOM05D003157 ORTHO05D004447 2.2e-16 92.0 127 33.9
Lsat_1_v5_gn_1_27780 Lactuca sativa HOM05D003157 ORTHO05D004447 9.1e-15 86.7 329 28.3
Migut.K00603 Erythranthe guttata HOM05D003157 ORTHO05D004447 1.2e-14 86.3 110 40.0
Zm00001eb079700 Zea mays HOM05D003157 ORTHO05D004447 2.0e-14 85.5 461 25.2
Cfa025644 Carpinus fangiana HOM05D003157 ORTHO05D123324 3.5e-14 84.7 149 33.6
SEGI_31497 Sequoiadendron giganteum HOM05D003157 ORTHO05D012168 1.0e-10 73.2 110 44.5
CBR_g29958 Chara braunii HOM05D006040 ORTHO05D007134 2.6e-09 68.6 82 40.2
Psat2g093280 Pisum sativum HOM05D002199 ORTHO05D007829 9.8e-09 66.6 65 46.2
AagrBONN_evm.TU.Sc2ySwM_368.1925 Anthoceros agrestis HOM05D008964 ORTHO05D011370 1.3e-08 66.2 132 34.1
Mapoly0178s0003 Marchantia polymorpha HOM05D008964 ORTHO05D254275 1.3e-08 66.2 92 38.0
CBR_g3746 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-08 65.1 58 50.0
Aqoxy328s002 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 4.9e-08 64.3 53 52.8
AagrBONN_evm.TU.Sc2ySwM_117.1584 Anthoceros agrestis HOM05D013540 ORTHO05D038468 8.3e-08 63.5 80 37.5
Aqoxy3G03011 Aquilegia oxysepala HOM05D003157 ORTHO05D012168 1.2e-06 59.7 89 40.4
Ca_03503_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 1.6e-06 59.3 77 41.6
TAR622G1022 Trochodendron aralioides HOM05D003157 ORTHO05D004447 2.0e-06 58.9 45 53.3
ECA232G3078 Erigeron canadensis HOM05D000048 ORTHO05D002613 3.5e-06 58.2 89 38.2
Atru.chr9.2574 Acer truncatum HOM05D003157 ORTHO05D004447 5.9e-06 57.4 172 30.8


User provided reference genes

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