Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0095s0037 Marchantia polymorpha HOM05D005383 ORTHO05D006722 3.0e-163 578.9 410 100.0
PSO063G2254 Papaver somniferum HOM05D005383 ORTHO05D006722 4.8e-36 156.4 337 56.4
Pp3c7_7980 Physcomitrium patens HOM05D005383 ORTHO05D006722 7.6e-34 149.1 389 51.4
PSO017G2626 Papaver somniferum HOM05D005383 ORTHO05D006722 1.3e-33 148.3 336 55.7
Ca_00052_v3 Cicer arietinum L. HOM05D005383 ORTHO05D006722 8.4e-33 145.6 357 51.5
MD08G1239600 Malus domestica HOM05D005383 ORTHO05D006722 1.4e-32 144.8 361 53.2
TAR628G0519 Trochodendron aralioides HOM05D005383 ORTHO05D006722 4.2e-32 143.3 361 53.2
CDE02G2650 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 7.2e-32 142.5 356 51.4
CAN.G968.1 Capsicum annuum HOM05D005383 ORTHO05D006722 2.1e-31 141.0 318 56.3
CDE08G1140 Ceratophyllum demersum HOM05D005383 ORTHO05D006722 2.1e-31 141.0 360 51.7
RcHm_v2.0_Chr7g0220861 Rosa chinensis HOM05D005383 ORTHO05D006722 4.6e-31 139.8 356 53.1
Cpa.g.sc161.1 Carica papaya HOM05D005383 ORTHO05D006722 6.1e-31 139.4 357 51.8
DCAR_025351 Daucus carota HOM05D005383 ORTHO05D006722 7.9e-31 139.0 329 52.9
Nn5g27588 Nelumbo nucifera HOM05D005383 ORTHO05D006722 7.9e-31 139.0 357 51.8
BcaC04g20728 Brassica carinata HOM05D005383 ORTHO05D006722 1.0e-30 138.7 337 52.5
BolC9t56882H Brassica oleracea HOM05D005383 ORTHO05D006722 1.0e-30 138.7 337 52.5
AagrBONN_evm.TU.Sc2ySwM_228.1706 Anthoceros agrestis HOM05D005383 ORTHO05D006722 1.8e-30 137.9 239 66.1
MSTRG.5117 Avicennia marina HOM05D005383 ORTHO05D006722 2.3e-30 137.5 359 50.1
Potri.004G221700 Populus trichocarpa HOM05D005383 ORTHO05D006722 2.3e-30 137.5 318 55.7
Peaxi162Scf00003g04037 Petunia axillaris HOM05D005383 ORTHO05D006722 3.0e-30 137.1 336 51.8
TPR.G2110 Trifolium pratense HOM05D005383 ORTHO05D006722 3.9e-30 136.7 357 51.3
EL10Ac2g02705 Beta vulgaris HOM05D005383 ORTHO05D006722 6.7e-30 136.0 368 49.7
Lalb_Chr07g0185851 Lupinus albus HOM05D005383 ORTHO05D006722 6.7e-30 136.0 362 52.5
TAR381G0956 Trochodendron aralioides HOM05D005383 ORTHO05D006722 6.7e-30 136.0 359 51.3
HPP92_009272 Vanilla planifolia HOM05D005383 ORTHO05D006722 6.7e-30 136.0 309 56.6
Potri.003G010400 Populus trichocarpa HOM05D005383 ORTHO05D006722 1.1e-29 135.2 360 51.7
A10p07980 Brassica napus HOM05D005383 ORTHO05D006722 1.5e-29 134.8 337 53.4
Cc02_g22940 Coffea canephora HOM05D005383 ORTHO05D006722 1.5e-29 134.8 348 51.1
Eucgr.G00356 Eucalyptus grandis HOM05D005383 ORTHO05D006722 1.5e-29 134.8 358 49.7
SGA_v2.0_scaffold42G15921 Striga asiatica HOM05D005383 ORTHO05D006722 1.5e-29 134.8 363 50.1
BcaB08g35467 Brassica carinata HOM05D005383 ORTHO05D006722 2.5e-29 134.0 272 59.9
Psat1g221920 Pisum sativum HOM05D005383 ORTHO05D006722 2.5e-29 134.0 357 51.0
Solyc03g083310.4 Solanum lycopersicum HOM05D005383 ORTHO05D006722 2.5e-29 134.0 332 53.6
CBR_g52462 Chara braunii HOM05D005383 ORTHO05D006722 3.3e-29 133.7 276 62.3
BraSC35t46002Z Brassica rapa HOM05D005383 ORTHO05D006722 7.4e-29 132.5 337 52.8
arahy.Tifrunner.gnm1.ann1.UJ0XJV Arachis hypogaea HOM05D005383 ORTHO05D006722 1.3e-28 131.7 356 52.5
GSVIVG01023286001 Vitis vinifera HOM05D005383 ORTHO05D006722 1.3e-28 131.7 358 51.4
HanXRQChr08g0209021 Helianthus annuus HOM05D005383 ORTHO05D006722 2.2e-28 131.0 333 52.6
Sed0026787 Sechium edule HOM05D005383 ORTHO05D006722 2.2e-28 131.0 361 50.7
C03p19190 Brassica napus HOM05D005383 ORTHO05D006722 2.8e-28 130.6 353 51.3
CANSAT54G1323 Cannabis sativa HOM05D005383 ORTHO05D006722 2.8e-28 130.6 361 50.4
Glyma.08G126300 Glycine max HOM05D005383 ORTHO05D006722 2.8e-28 130.6 356 51.1
HPP92_013744 Vanilla planifolia HOM05D006763 ORTHO05D008659 2.8e-28 130.6 258 61.2
CSS0013900 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 3.7e-28 130.2 318 54.1
CSS0016011 Camellia sinensis var. sinensis HOM05D005383 ORTHO05D006722 3.7e-28 130.2 318 54.1
FvH4_5g28700 Fragaria vesca HOM05D005383 ORTHO05D006722 3.7e-28 130.2 353 51.6
VMungo0251G3735 Vigna mungo HOM05D005383 ORTHO05D006722 4.8e-28 129.8 356 50.8
Aqoxy6G00141 Aquilegia oxysepala HOM05D005383 ORTHO05D006722 6.3e-28 129.4 307 55.4
Nitab4.5_0009812g0010 Nicotiana tabacum HOM05D005383 ORTHO05D006722 6.3e-28 129.4 356 50.3
Os02g0551900 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 6.3e-28 129.4 256 62.5
Manes.10G120600 Manihot esculenta HOM05D005383 ORTHO05D006722 8.2e-28 129.0 318 53.5
Atru.chr6.733 Acer truncatum HOM05D005383 ORTHO05D006722 1.1e-27 128.6 357 51.5
Ciclev10001534m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.1e-27 128.6 358 51.1
Lsat_1_v5_gn_4_6600 Lactuca sativa HOM05D005383 ORTHO05D006722 1.1e-27 128.6 371 50.7
Thhalv10028723m.g Eutrema salsugineum HOM05D005383 ORTHO05D006722 1.4e-27 128.3 339 51.6
FAN13G0305 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.4e-27 128.3 379 49.6
Glyma.05G167900 Glycine max HOM05D005383 ORTHO05D006722 1.4e-27 128.3 356 50.8
Hma1.2p1_1108F.1_g257860 Hydrangea macrophylla HOM05D005383 ORTHO05D006722 1.4e-27 128.3 317 53.0
PGR042G1418 Punica granatum HOM05D005383 ORTHO05D006722 1.8e-27 127.9 272 58.8
C09p39820 Brassica napus HOM05D005383 ORTHO05D006722 2.4e-27 127.5 324 53.4
Lalb_Chr13g0295611 Lupinus albus HOM05D005383 ORTHO05D006722 2.4e-27 127.5 331 52.6
FAN08G2879 Fragaria x ananassa HOM05D005383 ORTHO05D006722 3.1e-27 127.1 353 51.0
Phvul.002G248200 Phaseolus vulgaris HOM05D005383 ORTHO05D006722 3.1e-27 127.1 356 50.6
Sopen03g023060 Solanum pennellii HOM05D005383 ORTHO05D006722 3.1e-27 127.1 330 52.1
MELO3C011837.2 Cucumis melo HOM05D005383 ORTHO05D006722 4.1e-27 126.7 318 54.4
Dinv01847 Davidia involucrata HOM05D005383 ORTHO05D006722 4.1e-27 126.7 345 51.0
Nitab4.5_0000548g0200 Nicotiana tabacum HOM05D005383 ORTHO05D006722 5.3e-27 126.3 356 49.7
QL02p099934 Quercus lobata HOM05D005383 ORTHO05D006722 5.3e-27 126.3 360 50.3
Sp6g13330 Schrenkiella parvula HOM05D005383 ORTHO05D006722 5.3e-27 126.3 335 51.9
Rhsim11G0125900 Rhododendron simsii HOM05D005383 ORTHO05D006722 6.9e-27 125.9 328 51.8
BcaC01g06099 Brassica carinata HOM05D005383 ORTHO05D006722 9.0e-27 125.6 267 58.1
PGSC0003DMG400009082 Solanum tuberosum HOM05D005383 ORTHO05D006722 9.0e-27 125.6 324 53.1
CiPaw.05G051100 Carya illinoinensis HOM05D005383 ORTHO05D006722 1.2e-26 125.2 350 50.6
TWI23G0375 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 1.2e-26 125.2 318 53.8
THA.LOC104801420 Tarenaya hassleriana HOM05D005383 ORTHO05D006722 1.5e-26 124.8 340 51.5
Migut.B00804 Erythranthe guttata HOM05D005383 ORTHO05D006722 2.6e-26 124.0 322 52.8
HanXRQChr04g0103661 Helianthus annuus HOM05D005383 ORTHO05D006722 3.4e-26 123.6 364 50.0
Prupe.1G576100 Prunus persica HOM05D005383 ORTHO05D006722 3.4e-26 123.6 357 41.2
Lj4g0022432 Lotus japonicus HOM05D005383 ORTHO05D006722 4.5e-26 123.2 320 54.1
A03p16300 Brassica napus HOM05D005383 ORTHO05D006722 7.7e-26 122.5 354 49.7
CsaV3_5G029920 Cucumis sativus L. HOM05D005383 ORTHO05D006722 7.7e-26 122.5 318 53.8
AT4G06634 Arabidopsis thaliana HOM05D005383 ORTHO05D006722 1.7e-25 121.3 335 51.9
vmacro01730 Vaccinium macrocarpon HOM05D005383 ORTHO05D006722 2.2e-25 120.9 326 51.2
Zm00001eb243510 Zea mays HOM05D005383 ORTHO05D006722 2.9e-25 120.6 253 61.3
CiPaw.06G143700 Carya illinoinensis HOM05D005383 ORTHO05D006722 5.0e-25 119.8 363 39.7
Gohir.A01G182000 Gossypium hirsutum HOM05D005383 ORTHO05D006722 5.0e-25 119.8 357 50.7
arahy.Tifrunner.gnm1.ann1.E4SRBI Arachis hypogaea HOM05D005383 ORTHO05D006722 6.5e-25 119.4 344 53.2
Carub.0006s2631 Capsella rubella HOM05D005383 ORTHO05D006722 6.5e-25 119.4 334 51.2
ECA233G1887 Erigeron canadensis HOM05D005383 ORTHO05D006722 6.5e-25 119.4 364 50.0
Zm00001eb181970 Zea mays HOM05D005383 ORTHO05D006722 8.5e-25 119.0 306 53.9
AL6G41240 Arabidopsis lyrata HOM05D005383 ORTHO05D006722 1.1e-24 118.6 340 52.1
arahy.Tifrunner.gnm1.ann1.I6AGPX Arachis hypogaea HOM05D005383 ORTHO05D006722 1.1e-24 118.6 344 53.2
TWI59G0781 Tripterygium wilfordii HOM05D005383 ORTHO05D006722 1.1e-24 118.6 334 52.7
Ciclev10003783m.g Citrus clementina HOM05D005383 ORTHO05D006722 1.4e-24 118.2 357 50.1
Actinidia00189 Actinidia chinensis HOM05D005383 ORTHO05D006722 1.9e-24 117.9 274 58.4
CARHR260070 Cardamine hirsuta HOM05D005383 ORTHO05D006722 1.9e-24 117.9 344 51.7
Gohir.D01G173100 Gossypium hirsutum HOM05D005383 ORTHO05D006722 1.9e-24 117.9 357 50.4
unitig_699.g19853 Utricularia gibba HOM05D005383 ORTHO05D006722 1.9e-24 117.9 354 30.5
SMO347G0081 Selaginella moellendorffii HOM05D005383 ORTHO05D006722 3.2e-24 117.1 227 59.5
BolC3t14307H Brassica oleracea HOM05D005383 ORTHO05D006722 4.2e-24 116.7 365 42.2
Lsat_1_v5_gn_8_160061 Lactuca sativa HOM05D005383 ORTHO05D006722 4.2e-24 116.7 252 61.1
Os05g0106000 Oryza sativa ssp. japonica HOM05D005383 ORTHO05D006722 5.5e-24 116.3 270 56.3
Gorai.002G214700 Gossypium raimondii HOM05D005383 ORTHO05D006722 9.4e-24 115.5 350 51.4
Thecc.02G025800 Theobroma cacao HOM05D005383 ORTHO05D006722 1.2e-23 115.2 353 51.0
Duzib248G0552 Durio zibethinus HOM05D005383 ORTHO05D006722 1.6e-23 114.8 362 34.5
BraA03t10921Z Brassica rapa HOM05D005383 ORTHO05D006722 2.1e-23 114.4 365 41.6
Lj9A301T38 Lonicera japonica HOM05D005383 ORTHO05D006722 2.1e-23 114.4 326 51.5
Zm00001eb267130 Zea mays HOM05D005383 ORTHO05D006722 2.1e-23 114.4 243 60.5
Haze_01820 Corylus avellana HOM05D005383 ORTHO05D006722 2.7e-23 114.0 385 35.3
Sed0022153 Sechium edule HOM05D005383 ORTHO05D006722 4.6e-23 113.2 354 50.0
COL.COLO4_17761 Corchorus olitorius HOM05D005383 ORTHO05D006722 6.1e-23 112.8 370 33.0
Aa31LG3G14030 Aethionema arabicum HOM05D005383 ORTHO05D006722 3.9e-22 110.2 357 49.0
Hund12945 Selenicereus undatus HOM05D005383 ORTHO05D006722 1.1e-21 108.6 356 38.2
SEGI_13518 Sequoiadendron giganteum HOM05D005383 ORTHO05D006722 1.1e-21 108.6 110 62.7
BcaC01g06075 Brassica carinata HOM05D005383 ORTHO05D006722 2.5e-21 107.5 306 51.0
ATR0071G030 Amborella trichopoda HOM05D005383 ORTHO05D006722 4.3e-21 106.7 327 54.1
FAN04G2588 Fragaria x ananassa HOM05D005383 ORTHO05D006722 1.1e-19 102.1 116 59.5
Sabra03G0005300 Salix brachista HOM05D005383 ORTHO05D006722 1.1e-19 102.1 89 50.6
Actinidia39015 Actinidia chinensis HOM05D005383 ORTHO05D006722 5.3e-19 99.8 116 57.8
MD15G1431100 Malus domestica HOM05D005383 ORTHO05D006722 9.1e-19 99.0 276 51.8
ClCG11G013400 Citrullus lanatus HOM05D005383 ORTHO05D006722 4.5e-18 96.7 116 58.6
MSTRG.16504 Avicennia marina HOM05D005383 ORTHO05D006722 1.0e-17 95.5 315 49.8
Sc07g0004970 Simmondsia chinensis HOM05D005383 ORTHO05D006722 3.8e-17 93.6 252 58.7
unitig_747.g21262 Utricularia gibba HOM05D005383 ORTHO05D006722 1.1e-16 92.0 370 45.9
Oeu036675.1 Olea europaea HOM05D005383 ORTHO05D006722 3.2e-16 90.5 319 49.2
Ciclev10003892m.g Citrus clementina HOM05D005383 ORTHO05D006722 6.1e-15 86.3 333 39.3
FAN18G2475 Fragaria x ananassa HOM05D005383 ORTHO05D006722 2.2e-12 77.8 115 53.0
AUR62041111 Chenopodium quinoa HOM05D005383 ORTHO05D006722 2.0e-10 71.2 187 30.5
Peaxi162Scf03254g00012 Petunia axillaris HOM05D005383 ORTHO05D006722 2.6e-10 70.9 148 33.8
Peaxi162Scf00003g03953 Petunia axillaris HOM05D000011 ORTHO05D011267 1.2e-07 62.0 59 44.1
ATR0071G005 Amborella trichopoda HOM05D005383 ORTHO05D006722 3.6e-07 60.5 80 42.5
CAN.G982.21 Capsicum annuum HOM05D005383 ORTHO05D006722 8.0e-07 59.3 145 34.5
Sabra01G0167800 Salix brachista HOM05D005383 ORTHO05D006722 1.8e-06 58.2 139 33.1


User provided reference genes

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