Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0090s0043 Marchantia polymorpha HOM05D006268 ORTHO05D008118 1.3e-182 642.9 322 100.0
Pp3c4_10360 Physcomitrium patens HOM05D006268 ORTHO05D008118 9.7e-93 344.4 327 57.2
SMO367G0371 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 2.7e-82 309.7 342 50.0
ATR0049G059 Amborella trichopoda HOM05D006268 ORTHO05D008118 4.0e-78 295.8 341 48.1
SEGI_16160 Sequoiadendron giganteum HOM05D006268 ORTHO05D008118 9.8e-77 291.2 348 47.1
CSS0005578 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 9.2e-75 284.6 337 46.6
MELO3C006233.2 Cucumis melo HOM05D006268 ORTHO05D008118 1.2e-74 284.3 349 47.0
TAR375G0229 Trochodendron aralioides HOM05D006268 ORTHO05D008118 1.2e-74 284.3 345 45.5
CsaV3_3G010120 Cucumis sativus L. HOM05D006268 ORTHO05D008118 2.3e-73 280.0 349 46.1
Cfa010996 Carpinus fangiana HOM05D006268 ORTHO05D008118 3.8e-73 279.3 345 46.7
Haze_02942 Corylus avellana HOM05D006268 ORTHO05D008118 5.0e-73 278.9 345 46.1
Lsat_1_v5_gn_7_10860 Lactuca sativa HOM05D006268 ORTHO05D008118 6.6e-73 278.5 326 47.5
vmacro21105 Vaccinium macrocarpon HOM05D006268 ORTHO05D008118 6.6e-73 278.5 339 45.4
Ah.06g189690 Amaranthus hybridus HOM05D006268 ORTHO05D008118 8.6e-73 278.1 350 44.9
PGR083G0810 Punica granatum HOM05D006268 ORTHO05D008118 8.6e-73 278.1 339 47.2
Sed0013667 Sechium edule HOM05D006268 ORTHO05D008118 1.5e-72 277.3 339 45.7
Eucgr.D01130 Eucalyptus grandis HOM05D006268 ORTHO05D008118 2.5e-72 276.6 341 46.6
TWI59G0917 Tripterygium wilfordii HOM05D006268 ORTHO05D008118 3.3e-72 276.2 336 46.1
Phvul.010G033866 Phaseolus vulgaris HOM05D006268 ORTHO05D008118 4.3e-72 275.8 336 47.3
PSO782G1498 Papaver somniferum HOM05D006268 ORTHO05D008118 1.6e-71 273.9 338 44.4
Rhsim01G0145800 Rhododendron simsii HOM05D006268 ORTHO05D008118 1.6e-71 273.9 340 45.6
CiPaw.13G019100 Carya illinoinensis HOM05D006268 ORTHO05D008118 2.1e-71 273.5 345 45.2
FAN03G0807 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.8e-71 273.1 339 46.0
FvH4_7g08020 Fragaria vesca HOM05D006268 ORTHO05D008118 3.6e-71 272.7 338 45.9
FAN06G0712 Fragaria x ananassa HOM05D006268 ORTHO05D008118 3.6e-71 272.7 339 46.0
Glyma.03G093200 Glycine max HOM05D006268 ORTHO05D008118 4.7e-71 272.3 335 47.5
PSO063G1446 Papaver somniferum HOM05D006268 ORTHO05D008118 4.7e-71 272.3 338 44.4
DCAR_029548 Daucus carota HOM05D006268 ORTHO05D008118 6.1e-71 271.9 337 44.8
Aa31LG11G10 Aethionema arabicum HOM05D006268 ORTHO05D008118 8.0e-71 271.6 326 46.9
AT5G58220 Arabidopsis thaliana HOM05D006268 ORTHO05D008118 8.0e-71 271.6 315 48.6
Sp6g19880 Schrenkiella parvula HOM05D006268 ORTHO05D008118 8.0e-71 271.6 316 48.1
Sc26g0001930 Simmondsia chinensis HOM05D006268 ORTHO05D008118 1.0e-70 271.2 351 43.6
Glyma.16G080700 Glycine max HOM05D006268 ORTHO05D008118 1.4e-70 270.8 335 46.9
VMungo0331G0592 Vigna mungo HOM05D006268 ORTHO05D008118 1.4e-70 270.8 336 46.4
EL10Ac1g00692 Beta vulgaris HOM05D006268 ORTHO05D008118 1.8e-70 270.4 335 44.2
GSVIVG01016051001 Vitis vinifera HOM05D006268 ORTHO05D008118 1.8e-70 270.4 343 43.1
MD00G1098400 Malus domestica HOM05D006268 ORTHO05D008118 2.3e-70 270.0 343 45.5
Potri.002G238300 Populus trichocarpa HOM05D006268 ORTHO05D008118 2.3e-70 270.0 339 45.1
Carub.0008s1876 Capsella rubella HOM05D006268 ORTHO05D008118 3.0e-70 269.6 314 49.4
Nitab4.5_0001209g0060 Nicotiana tabacum HOM05D006268 ORTHO05D008118 3.0e-70 269.6 348 44.5
Hund26937 Selenicereus undatus HOM05D006268 ORTHO05D008118 3.0e-70 269.6 338 45.6
Gorai.N008000 Gossypium raimondii HOM05D006268 ORTHO05D008118 4.0e-70 269.2 331 44.7
HanXRQChr04g0123661 Helianthus annuus HOM05D006268 ORTHO05D008118 8.9e-70 268.1 325 47.4
Nitab4.5_0001476g0040 Nicotiana tabacum HOM05D006268 ORTHO05D008118 8.9e-70 268.1 348 45.1
A02p07860 Brassica napus HOM05D006268 ORTHO05D008118 1.2e-69 267.7 331 47.1
Nn1g00551 Nelumbo nucifera HOM05D006268 ORTHO05D008118 1.2e-69 267.7 347 45.5
AUR62023342 Chenopodium quinoa HOM05D006268 ORTHO05D008118 1.5e-69 267.3 336 44.6
Thhalv10014126m.g Eutrema salsugineum HOM05D006268 ORTHO05D008118 2.0e-69 266.9 326 46.0
BraA02t05859Z Brassica rapa HOM05D006268 ORTHO05D008118 2.6e-69 266.5 331 46.2
Gohir.A06G169600 Gossypium hirsutum HOM05D006268 ORTHO05D008118 3.4e-69 266.2 335 43.9
SalBow4G0743 Salvia bowleyana HOM05D006268 ORTHO05D008118 3.4e-69 266.2 332 44.3
Prupe.2G109200 Prunus persica HOM05D006268 ORTHO05D008118 4.4e-69 265.8 341 45.2
RcHm_v2.0_Chr1g0341291 Rosa chinensis HOM05D006268 ORTHO05D008118 5.7e-69 265.4 344 45.1
Lj3g0019214 Lotus japonicus HOM05D006268 ORTHO05D008118 7.5e-69 265.0 345 44.6
Actinidia33290 Actinidia chinensis HOM05D006268 ORTHO05D008118 1.7e-68 263.8 342 43.6
MSTRG.4977 Avicennia marina HOM05D006268 ORTHO05D008118 1.7e-68 263.8 335 44.8
C02p13500 Brassica napus HOM05D006268 ORTHO05D008118 1.7e-68 263.8 326 46.9
BolC2t07462H Brassica oleracea HOM05D006268 ORTHO05D008118 1.7e-68 263.8 326 46.9
CANSAT54G1338 Cannabis sativa HOM05D006268 ORTHO05D008118 1.7e-68 263.8 339 44.5
Psat4g207400 Pisum sativum HOM05D006268 ORTHO05D008118 1.7e-68 263.8 345 45.8
BcaC03g14111 Brassica carinata HOM05D006268 ORTHO05D008118 2.2e-68 263.5 326 46.6
Migut.N01815 Erythranthe guttata HOM05D006268 ORTHO05D008118 2.2e-68 263.5 334 44.6
COL.COLO4_19510 Corchorus olitorius HOM05D006268 ORTHO05D006513 2.9e-68 263.1 319 46.4
Solyc01g080940.3 Solanum lycopersicum HOM05D006268 ORTHO05D008118 2.9e-68 263.1 347 45.5
CARHR272020 Cardamine hirsuta HOM05D006268 ORTHO05D008118 4.9e-68 262.3 317 47.3
Sopen01g032530 Solanum pennellii HOM05D006268 ORTHO05D008118 1.1e-67 261.2 346 44.8
Aqoxy3G02437 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 1.8e-67 260.4 338 44.7
BcaB05g22409 Brassica carinata HOM05D006268 ORTHO05D008118 1.8e-67 260.4 326 46.0
Cc02_g26120 Coffea canephora HOM05D006268 ORTHO05D008118 2.4e-67 260.0 339 44.0
Ca_23170_v3 Cicer arietinum L. HOM05D006268 ORTHO05D008118 5.4e-67 258.8 339 45.7
Sabra02G0181600 Salix brachista HOM05D006268 ORTHO05D008118 7.0e-67 258.5 336 44.3
Aqoxy3G02409 Aquilegia oxysepala HOM05D006268 ORTHO05D008118 9.2e-67 258.1 352 43.8
CAN.G1551.1 Capsicum annuum HOM05D006268 ORTHO05D008118 9.2e-67 258.1 348 42.5
Ciclev10021110m.g Citrus clementina HOM05D006268 ORTHO05D008118 9.2e-67 258.1 334 45.2
Duzib128G0100 Durio zibethinus HOM05D006268 ORTHO05D008118 1.2e-66 257.7 348 42.8
FAN01G0355 Fragaria x ananassa HOM05D006268 ORTHO05D008118 1.2e-66 257.7 382 42.1
PGSC0003DMG400001820 Solanum tuberosum HOM05D006268 ORTHO05D008118 1.2e-66 257.7 348 43.4
HPP92_028001 Vanilla planifolia HOM05D006268 ORTHO05D008118 1.6e-66 257.3 321 44.2
Lalb_Chr07g0194551 Lupinus albus HOM05D006268 ORTHO05D008118 2.0e-66 256.9 336 44.6
unitig_22.g5778 Utricularia gibba HOM05D006268 ORTHO05D008118 4.6e-66 255.8 330 46.4
Thecc.03G001300 Theobroma cacao HOM05D006268 ORTHO05D008118 1.0e-65 254.6 334 44.0
AagrBONN_evm.TU.Sc2ySwM_228.2734 Anthoceros agrestis HOM05D006268 ORTHO05D008118 1.7e-65 253.8 321 46.7
Zm00001eb392560 Zea mays HOM05D006268 ORTHO05D008118 1.7e-65 253.8 312 46.8
AL8G34320 Arabidopsis lyrata HOM05D006268 ORTHO05D008118 2.3e-65 253.4 328 45.7
CSS0033423 Camellia sinensis var. sinensis HOM05D006268 ORTHO05D008118 1.1e-64 251.1 337 43.6
QL04p024264 Quercus lobata HOM05D006268 ORTHO05D008118 1.1e-64 251.1 370 41.4
Atru.BG.53.p Acer truncatum HOM05D006268 ORTHO05D008118 1.9e-64 250.4 323 45.8
THA.LOC104799599 Tarenaya hassleriana HOM05D006268 ORTHO05D008118 2.5e-64 250.0 327 44.3
ClCG05G002670 Citrullus lanatus HOM05D006268 ORTHO05D008118 3.3e-64 249.6 349 43.8
AUR62013813 Chenopodium quinoa HOM05D006268 ORTHO05D008118 4.3e-64 249.2 313 43.1
Medtr8g010550 Medicago truncatula HOM05D006268 ORTHO05D008118 4.3e-64 249.2 351 41.6
Os03g0390700 Oryza sativa ssp. japonica HOM05D006268 ORTHO05D008118 6.2e-63 245.4 336 43.2
PRCOL_00004243 Prasinoderma coloniale HOM05D006268 ORTHO05D008118 1.2e-61 241.1 315 42.5
Cre17.g735950 Chlamydomonas reinhardtii HOM05D006268 ORTHO05D008118 1.4e-59 234.2 305 42.3
CBR_g30589 Chara braunii HOM05D006268 ORTHO05D008118 1.5e-56 224.2 461 35.1
Manes.08G055700 Manihot esculenta HOM05D006268 ORTHO05D008118 3.3e-56 223.0 291 44.0
ECA236G2174 Erigeron canadensis HOM05D006268 ORTHO05D008118 1.8e-54 217.2 293 43.3
arahy.Tifrunner.gnm1.ann1.EHLP6C Arachis hypogaea HOM05D006268 ORTHO05D008118 8.9e-54 214.9 340 43.5
arahy.Tifrunner.gnm1.ann1.V3PJPX Arachis hypogaea HOM05D006268 ORTHO05D008118 4.4e-53 212.6 340 42.6
TPR.G9770 Trifolium pratense HOM05D006268 ORTHO05D008118 2.2e-52 210.3 348 38.8
CDE04G2879 Ceratophyllum demersum HOM05D006268 ORTHO05D008118 3.7e-52 209.5 279 45.5
Dinv43994 Davidia involucrata HOM05D006268 ORTHO05D008118 3.9e-49 199.5 240 47.5
SGA_v2.0_scaffold95G28736 Striga asiatica HOM05D006268 ORTHO05D008118 1.2e-42 177.9 252 42.5
Lj7C555G14 Lonicera japonica HOM05D006268 ORTHO05D008118 1.3e-41 174.5 147 57.1
FAN10G2079 Fragaria x ananassa HOM05D006268 ORTHO05D008118 2.3e-41 173.7 311 37.0
SMO197G0011 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 1.2e-39 167.9 145 58.6
SMO367G0431 Selaginella moellendorffii HOM05D006268 ORTHO05D008118 5.2e-38 162.5 157 54.1
MCO07G440 Micromonas commoda HOM05D006268 ORTHO05D008118 2.6e-37 160.2 152 53.9
DCAR_025012 Daucus carota HOM05D006268 ORTHO05D008118 1.9e-35 154.1 154 52.6
Lj7C555T10 Lonicera japonica HOM05D006268 ORTHO05D008118 3.0e-25 120.2 143 44.1
BcaB05g22411 Brassica carinata HOM05D006268 ORTHO05D008118 1.5e-24 117.9 188 41.5
SHI28983 Sapria himalayana HOM05D006268 ORTHO05D008118 1.8e-22 110.9 153 40.5
MCO05G065 Micromonas commoda HOM05D006268 ORTHO05D008118 1.7e-20 104.4 127 45.7
Cpa.g.sc74.89 Carica papaya HOM05D006268 ORTHO05D008118 9.3e-19 98.6 152 40.1
BolC9t57859H Brassica oleracea HOM05D006268 ORTHO05D008118 2.5e-16 90.5 94 46.8
Sc26g0001910 Simmondsia chinensis HOM05D006268 ORTHO05D008118 5.8e-13 79.3 114 39.5
Hma1.2p1_0076F.1_g039600 Hydrangea macrophylla HOM05D006268 ORTHO05D008118 1.1e-11 75.1 56 58.9
Oeu050272.1 Olea europaea HOM05D006268 ORTHO05D008118 1.2e-10 71.6 62 50.0
Ca_29090_v3 Cicer arietinum L. HOM05D000582 ORTHO05D034183 9.6e-08 62.0 100 32.0
Cfa010995 Carpinus fangiana HOM05D006268 ORTHO05D008118 1.8e-06 57.8 37 64.9


User provided reference genes

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