Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 1.0e-177 626.7 344 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 8.8e-100 367.9 351 62.1
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 3.8e-95 352.4 363 56.5
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 8.0e-93 344.7 364 56.6
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 8.2e-90 334.7 363 53.4
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 6.1e-69 265.4 285 53.3
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 1.6e-53 214.2 286 48.6
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 3.7e-42 176.4 330 40.0
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 6.0e-40 169.1 172 56.4
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 3.9e-39 166.4 171 54.4
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.5e-38 164.5 168 53.6
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.9e-38 164.1 142 60.6
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 1.9e-38 164.1 139 59.7
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 5.6e-38 162.5 168 58.9
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 5.6e-38 162.5 153 58.2
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 7.3e-38 162.2 175 52.6
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 7.3e-38 162.2 139 61.9
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 9.6e-38 161.8 171 55.6
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 9.6e-38 161.8 187 52.4
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 9.6e-38 161.8 206 48.1
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 9.6e-38 161.8 171 53.2
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 1.6e-37 161.0 210 50.5
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 2.8e-37 160.2 197 48.2
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 2.8e-37 160.2 197 48.2
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 2.8e-37 160.2 197 48.2
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 2.8e-37 160.2 176 52.3
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 2.8e-37 160.2 186 50.5
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 2.8e-37 160.2 182 52.2
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 3.6e-37 159.8 172 55.2
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 4.7e-37 159.5 203 49.3
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 6.2e-37 159.1 168 53.0
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 6.2e-37 159.1 184 53.8
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 6.2e-37 159.1 198 48.5
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 1.1e-36 158.3 200 51.0
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 1.1e-36 158.3 170 54.7
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 1.1e-36 158.3 141 61.0
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 1.1e-36 158.3 173 50.3
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 1.4e-36 157.9 141 61.0
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 1.4e-36 157.9 196 50.0
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 1.4e-36 157.9 155 55.5
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 1.4e-36 157.9 193 49.7
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 1.8e-36 157.5 181 53.6
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 2.4e-36 157.1 175 52.0
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 2.4e-36 157.1 177 49.7
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 3.1e-36 156.8 169 53.3
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 3.1e-36 156.8 147 60.5
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 3.1e-36 156.8 179 52.5
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 5.2e-36 156.0 167 56.3
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 5.2e-36 156.0 185 49.2
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 6.8e-36 155.6 152 57.9
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 6.8e-36 155.6 156 57.7
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 6.8e-36 155.6 197 49.7
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 8.9e-36 155.2 196 48.0
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 8.9e-36 155.2 141 61.0
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 1.2e-35 154.8 171 52.6
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 1.2e-35 154.8 195 47.7
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 1.5e-35 154.5 191 50.8
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 1.5e-35 154.5 189 50.8
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 2.0e-35 154.1 174 52.3
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 2.0e-35 154.1 148 56.8
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 2.6e-35 153.7 135 58.5
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 2.6e-35 153.7 175 52.0
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 3.4e-35 153.3 138 59.4
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 3.4e-35 153.3 175 49.7
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 4.4e-35 152.9 141 56.7
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 5.8e-35 152.5 138 59.4
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 7.6e-35 152.1 143 58.0
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 7.6e-35 152.1 179 49.7
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 9.9e-35 151.8 197 47.2
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 9.9e-35 151.8 171 52.6
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 9.9e-35 151.8 159 54.1
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 1.3e-34 151.4 173 54.9
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 1.7e-34 151.0 178 54.5
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 2.2e-34 150.6 173 54.3
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 2.2e-34 150.6 147 57.1
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 2.9e-34 150.2 169 53.8
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 2.9e-34 150.2 166 50.6
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 2.9e-34 150.2 204 49.0
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 3.8e-34 149.8 191 50.3
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 3.8e-34 149.8 184 47.3
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 3.8e-34 149.8 164 50.6
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 4.9e-34 149.4 170 51.8
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 4.9e-34 149.4 158 57.0
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 8.4e-34 148.7 174 50.6
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 8.4e-34 148.7 143 58.0
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 1.1e-33 148.3 169 53.3
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 1.4e-33 147.9 156 57.1
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 1.4e-33 147.9 146 59.6
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 1.9e-33 147.5 174 52.9
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.9e-33 147.5 172 51.7
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 1.9e-33 147.5 156 56.4
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 3.2e-33 146.7 156 56.4
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.2e-33 146.7 172 51.2
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 3.2e-33 146.7 159 56.6
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 4.2e-33 146.4 175 47.4
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 4.2e-33 146.4 172 51.2
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 4.2e-33 146.4 195 51.3
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 4.2e-33 146.4 176 51.1
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 4.2e-33 146.4 189 48.1
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 4.2e-33 146.4 137 59.1
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 5.4e-33 146.0 196 48.0
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 5.4e-33 146.0 173 50.9
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 5.4e-33 146.0 173 50.9
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 7.1e-33 145.6 160 55.6
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 7.1e-33 145.6 156 55.8
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 7.1e-33 145.6 156 55.8
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 7.1e-33 145.6 155 56.8
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 7.1e-33 145.6 156 55.8
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 7.1e-33 145.6 155 56.8
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 7.1e-33 145.6 172 50.6
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 7.1e-33 145.6 172 50.6
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 9.3e-33 145.2 152 57.9
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 9.3e-33 145.2 142 56.3
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 9.3e-33 145.2 177 48.0
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 9.3e-33 145.2 152 57.2
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 1.6e-32 144.4 157 56.1
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 1.6e-32 144.4 157 56.1
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 2.1e-32 144.1 142 59.2
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 2.7e-32 143.7 158 55.1
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 2.7e-32 143.7 147 58.5
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 3.5e-32 143.3 205 44.9
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 3.5e-32 143.3 159 54.7
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 3.5e-32 143.3 170 49.4
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 7.8e-32 142.1 193 50.3
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 7.8e-32 142.1 172 47.7
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 2.3e-31 140.6 172 50.6
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 2.3e-31 140.6 197 46.7
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 3.0e-31 140.2 153 56.2
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 3.0e-31 140.2 153 56.2
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 3.0e-31 140.2 153 56.2
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 3.9e-31 139.8 153 56.2
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 3.9e-31 139.8 157 54.1
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 5.1e-31 139.4 128 57.8
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 6.6e-31 139.0 153 56.9
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 6.6e-31 139.0 153 56.9
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 1.4e-28 131.3 116 60.3
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 2.4e-28 130.6 149 50.3
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 6.9e-28 129.0 113 62.8
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 2.0e-27 127.5 174 47.7
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 2.2e-26 124.0 188 43.6
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 4.9e-26 122.9 147 50.3
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 8.4e-26 122.1 147 51.0
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 3.2e-25 120.2 147 50.3
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 1.5e-22 111.3 117 55.6
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 5.6e-22 109.4 113 52.2
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 5.6e-22 109.4 158 43.7
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 1.8e-20 104.4 114 53.5
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 3.1e-20 103.6 188 39.9
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 3.4e-19 100.1 138 45.7
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 4.9e-18 96.3 176 43.2
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 7.9e-16 89.0 146 43.8
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 8.7e-15 85.5 74 63.5
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.5e-14 84.0 130 43.8
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 6.2e-13 79.3 76 53.9
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 1.8e-12 77.8 68 57.4
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 6.5e-10 69.3 63 55.6
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.1e-09 68.6 65 53.8
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 5.5e-09 66.2 132 37.1
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 1.6e-08 64.7 67 49.3
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 1.9e-06 57.8 84 40.5


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