Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0076s0085 Marchantia polymorpha HOM05D017817 ORTHO05D019625 0.0e+00 1325.1 695 100.0
Pp3c7_4080 Physcomitrium patens HOM05D017817 ORTHO05D019625 5.0e-110 402.9 479 46.1
SMO115G0190 Selaginella moellendorffii HOM05D017817 ORTHO05D019625 4.4e-106 389.8 403 49.9
Pp3c11_21780 Physcomitrium patens HOM05D017817 ORTHO05D019625 1.3e-105 388.3 381 50.4
AagrBONN_evm.TU.Sc2ySwM_117.73 Anthoceros agrestis HOM05D017817 ORTHO05D019625 1.2e-103 381.7 349 56.2
SEGI_15638 Sequoiadendron giganteum HOM05D017817 ORTHO05D019625 8.2e-97 359.0 525 40.6
CBR_g5724 Chara braunii HOM05D017817 ORTHO05D019625 2.3e-62 244.6 312 38.1
SEGI_30490 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 5.7e-13 80.5 191 28.8
CDE12G0931 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.3e-12 79.3 261 26.8
THA.LOC104812240 Tarenaya hassleriana HOM05D000218 ORTHO05D000125 1.3e-12 79.3 191 28.3
AL7G44880 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 2.1e-12 78.6 257 27.2
BcaB04g20974 Brassica carinata HOM05D000218 ORTHO05D000125 2.1e-12 78.6 195 28.7
HanXRQChr11g0340271 Helianthus annuus HOM05D000218 ORTHO05D000125 2.1e-12 78.6 191 29.3
QL03p029548 Quercus lobata HOM05D000218 ORTHO05D000125 2.1e-12 78.6 191 28.8
QL08p013128 Quercus lobata HOM05D000218 ORTHO05D000125 2.1e-12 78.6 191 28.8
SEGI_03835 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 2.1e-12 78.6 191 28.8
AagrBONN_evm.TU.Sc2ySwM_344.5186 Anthoceros agrestis HOM05D000218 ORTHO05D000125 2.8e-12 78.2 191 28.3
BcaB08g34671 Brassica carinata HOM05D000218 ORTHO05D000125 2.8e-12 78.2 243 29.2
AUR62004467 Chenopodium quinoa HOM05D000319 ORTHO05D000125 2.8e-12 78.2 257 27.2
Gohir.A04G021600 Gossypium hirsutum HOM05D000218 ORTHO05D000125 2.8e-12 78.2 191 28.3
Solyc07g064130.2 Solanum lycopersicum HOM05D000218 ORTHO05D000125 2.8e-12 78.2 191 28.3
AL6G35910 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.8
A01p36110 Brassica napus HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.8
Carub.0006s2219 Capsella rubella HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.3
MELO3C025417.2 Cucumis melo HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.8
Duzib128G1805 Durio zibethinus HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.3
Gohir.A01G075100 Gossypium hirsutum HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.3
Gohir.A04G021360 Gossypium hirsutum HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.8
Gohir.D01G062400 Gossypium hirsutum HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.8
Gohir.D05G365300 Gossypium hirsutum HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.8
Mapoly0080s0026 Marchantia polymorpha HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.8
PGR102G1951 Punica granatum HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.3
TWI74G0725 Tripterygium wilfordii HOM05D000218 ORTHO05D000125 3.7e-12 77.8 191 28.3
Mapoly0034s0121 Marchantia polymorpha HOM05D000218 ORTHO05D000125 6.3e-12 77.0 191 28.3
Dinv35738 Davidia involucrata HOM05D000218 ORTHO05D000125 8.2e-12 76.6 217 25.8
TPR.G27490 Trifolium pratense HOM05D000218 ORTHO05D000125 8.2e-12 76.6 191 27.7
MSTRG.14419 Avicennia marina HOM05D000218 ORTHO05D000125 1.8e-11 75.5 191 28.3
Atru.chr2.3221 Acer truncatum HOM05D000218 ORTHO05D000125 4.1e-11 74.3 198 27.8
Cpa.g.sc97.61 Carica papaya HOM05D000218 ORTHO05D000125 4.1e-11 74.3 190 27.9
Prupe.2G185300 Prunus persica HOM05D000218 ORTHO05D000125 5.3e-11 73.9 191 27.7
AT3G09790 Arabidopsis thaliana HOM05D000218 ORTHO05D000125 6.9e-11 73.6 250 24.0
Atru.chr2.3220 Acer truncatum HOM05D000218 ORTHO05D000125 1.2e-10 72.8 192 27.6
BcaC01g02857 Brassica carinata HOM05D000218 ORTHO05D000125 1.5e-10 72.4 191 28.3
Aqoxy4G00644 Aquilegia oxysepala HOM05D000218 ORTHO05D000125 2.0e-10 72.0 191 27.7
BcaC01g02906 Brassica carinata HOM05D000218 ORTHO05D000125 2.0e-10 72.0 233 27.9
Medtr4g080920 Medicago truncatula HOM05D000218 ORTHO05D000125 2.6e-10 71.6 173 29.5
Medtr8g479250 Medicago truncatula HOM05D000218 ORTHO05D000125 2.6e-10 71.6 206 26.2
AT1G55060 Arabidopsis thaliana HOM05D000218 ORTHO05D000125 3.4e-10 71.2 157 28.0
BraA05t19919Z Brassica rapa HOM05D000218 ORTHO05D000125 4.5e-10 70.9 161 28.0
PSO017G3312 Papaver somniferum HOM05D000218 ORTHO05D000125 4.5e-10 70.9 157 28.7
CARHR084240 Cardamine hirsuta HOM05D000218 ORTHO05D000125 5.9e-10 70.5 157 28.0
Gorai.002G147600 Gossypium raimondii HOM05D000218 ORTHO05D000125 5.9e-10 70.5 195 25.6
Os04g0628100 Oryza sativa ssp. japonica HOM05D000218 ORTHO05D000125 5.9e-10 70.5 157 27.4
PSO675G0099 Papaver somniferum HOM05D000218 ORTHO05D000125 5.9e-10 70.5 157 27.4
AL3G21020 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 7.6e-10 70.1 200 29.0
Cc08_g05690 Coffea canephora HOM05D000218 ORTHO05D000125 1.0e-09 69.7 157 27.4
QL07p044818 Quercus lobata HOM05D000218 ORTHO05D000125 1.0e-09 69.7 157 28.0
SEGI_16078 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 1.0e-09 69.7 199 27.6
Mapoly0094s0010 Marchantia polymorpha HOM05D000218 ORTHO05D000125 1.3e-09 69.3 157 27.4
Oeu013728.1 Olea europaea HOM05D000218 ORTHO05D000125 1.3e-09 69.3 157 27.4
AagrBONN_evm.TU.Sc2ySwM_344.4429 Anthoceros agrestis HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 28.0
BcaB07g33588 Brassica carinata HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 27.4
CSS0017718 Camellia sinensis var. sinensis HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 26.8
Cpa.g.sc97.60 Carica papaya HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 27.4
Cc05_g13290 Coffea canephora HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 27.4
COL.COLO4_09577 Corchorus olitorius HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 28.0
Lj3g0012238 Lotus japonicus HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 27.4
Lj4g0010201 Lotus japonicus HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 27.4
PSO832G0914 Papaver somniferum HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 27.4
SEGI_09573 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 28.0
SEGI_11630 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 1.7e-09 68.9 157 28.0
AL6G12540 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 2.2e-09 68.6 157 27.4
FvH4_3g21921 Fragaria vesca HOM05D000218 ORTHO05D000125 2.2e-09 68.6 157 26.8
MD11G1226300 Malus domestica HOM05D000218 ORTHO05D000125 2.2e-09 68.6 226 25.2
TWI74G0332 Tripterygium wilfordii HOM05D000218 ORTHO05D000125 2.2e-09 68.6 157 27.4
AL6G32160 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 2.9e-09 68.2 157 26.8
BcaB08g34826 Brassica carinata HOM05D000218 ORTHO05D000125 2.9e-09 68.2 203 27.1
CSS0036315 Camellia sinensis var. sinensis HOM05D000218 ORTHO05D000125 2.9e-09 68.2 156 27.6
ECA248G3018 Erigeron canadensis HOM05D000218 ORTHO05D000125 2.9e-09 68.2 157 26.8
Mapoly0080s0025 Marchantia polymorpha HOM05D000218 ORTHO05D000125 2.9e-09 68.2 157 27.4
PSO500G0250 Papaver somniferum HOM05D000218 ORTHO05D000125 2.9e-09 68.2 156 27.6
PSO541G6244 Papaver somniferum HOM05D000218 ORTHO05D000125 2.9e-09 68.2 157 27.4
PSO832G4377 Papaver somniferum HOM05D000218 ORTHO05D000125 2.9e-09 68.2 157 27.4
Psat7g161800 Pisum sativum HOM05D000218 ORTHO05D000125 2.9e-09 68.2 157 28.0
Potri.006G129600 Populus trichocarpa HOM05D000218 ORTHO05D000125 2.9e-09 68.2 157 27.4
BcaC01g02856 Brassica carinata HOM05D000218 ORTHO05D000125 3.8e-09 67.8 220 26.4
Duzib093G0663 Durio zibethinus HOM05D000218 ORTHO05D000125 3.8e-09 67.8 157 27.4
AagrBONN_evm.TU.Sc2ySwM_228.186 Anthoceros agrestis HOM05D000218 ORTHO05D000125 6.5e-09 67.0 180 26.1
RcHm_v2.0_Chr7g0213511 Rosa chinensis HOM05D000218 ORTHO05D000125 6.5e-09 67.0 156 26.9
PSO724G1227 Papaver somniferum HOM05D000218 ORTHO05D000125 1.1e-08 66.2 157 26.8
C03p31640 Brassica napus HOM05D000218 ORTHO05D000125 1.4e-08 65.9 157 26.8
BcaC02g11781 Brassica carinata HOM05D000218 ORTHO05D000125 2.5e-08 65.1 191 27.7
Zm00001eb092550 Zea mays HOM05D000218 ORTHO05D000125 2.5e-08 65.1 192 27.1
Migut.L01673 Erythranthe guttata HOM05D000218 ORTHO05D000125 3.2e-08 64.7 201 27.9
Carub.0007s3174 Capsella rubella HOM05D000218 ORTHO05D000125 4.2e-08 64.3 144 26.4
Cc02_g31580 Coffea canephora HOM05D000218 ORTHO05D000125 4.2e-08 64.3 157 26.8
AL1G63060 Arabidopsis lyrata HOM05D000218 ORTHO05D000125 5.5e-08 63.9 157 26.1
AT5G37640 Arabidopsis thaliana HOM05D000218 ORTHO05D000125 5.5e-08 63.9 144 27.1
MBI07_g31087_MAGBIO Magnolia biondii HOM05D000218 ORTHO05D000125 5.5e-08 63.9 190 24.7
Cc02_g31600 Coffea canephora HOM05D000218 ORTHO05D000125 7.2e-08 63.5 196 25.5
MELO3C032916.2 Cucumis melo HOM05D000218 ORTHO05D000125 1.2e-07 62.8 158 27.2
HanXRQChr11g0340221 Helianthus annuus HOM05D000218 ORTHO05D000125 1.2e-07 62.8 143 28.0
SEGI_24423 Sequoiadendron giganteum HOM05D000218 ORTHO05D000125 1.6e-07 62.4 164 26.2
HanXRQChr15g0468481 Helianthus annuus HOM05D000218 ORTHO05D000125 2.7e-07 61.6 189 22.8
GSVIVG01023471001 Vitis vinifera HOM05D000218 ORTHO05D000125 2.7e-07 61.6 244 24.6
COL.COLO4_18221 Corchorus olitorius HOM05D004448 ORTHO05D005919 3.6e-07 61.2 132 26.5
BcaC07g40881 Brassica carinata HOM05D000218 ORTHO05D000125 6.1e-07 60.5 159 24.5
Aqoxy1G03887 Aquilegia oxysepala HOM05D000218 ORTHO05D000125 7.9e-07 60.1 141 27.0
C03p59310 Brassica napus HOM05D000218 ORTHO05D000125 7.9e-07 60.1 157 27.4
C04p11460 Brassica napus HOM05D000218 ORTHO05D000125 7.9e-07 60.1 124 28.2
Lj3g0018694 Lotus japonicus HOM05D000218 ORTHO05D000125 7.9e-07 60.1 124 28.2
PSO229G0037 Papaver somniferum HOM05D000218 ORTHO05D000125 7.9e-07 60.1 133 27.1
Psat7g114600 Pisum sativum HOM05D000218 ORTHO05D000125 7.9e-07 60.1 124 28.2
Psat7g115520 Pisum sativum HOM05D000218 ORTHO05D000125 7.9e-07 60.1 124 28.2
Aqoxy1G03886 Aquilegia oxysepala HOM05D000218 ORTHO05D000125 1.0e-06 59.7 198 26.3
BolC3t18192H Brassica oleracea HOM05D000218 ORTHO05D000125 1.0e-06 59.7 157 26.8
CsaV3_3G005390 Cucumis sativus L. HOM05D000218 ORTHO05D000125 1.0e-06 59.7 157 25.5
HanXRQChr01g0025971 Helianthus annuus HOM05D000218 ORTHO05D000125 1.0e-06 59.7 189 25.4
Aqoxy1G03884 Aquilegia oxysepala HOM05D000218 ORTHO05D000125 1.8e-06 58.9 141 26.2
HanXRQChr01g0026121 Helianthus annuus HOM05D000218 ORTHO05D000125 1.8e-06 58.9 191 24.6
Nn1g03633 Nelumbo nucifera HOM05D000218 ORTHO05D000125 3.0e-06 58.2 166 24.7
ECA236G1873 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.9e-06 57.8 157 24.8
HanXRQChr01g0025891 Helianthus annuus HOM05D000218 ORTHO05D000125 3.9e-06 57.8 192 26.0
PSO729G0234 Papaver somniferum HOM05D000218 ORTHO05D000125 5.1e-06 57.4 71 35.2
Carub.0006s0698 Capsella rubella HOM05D000218 ORTHO05D000125 6.7e-06 57.0 95 29.5
Gorai.008G136200 Gossypium raimondii HOM05D000218 ORTHO05D000125 6.7e-06 57.0 87 29.9
Aqoxy3G03445 Aquilegia oxysepala HOM05D000218 ORTHO05D000125 8.7e-06 56.6 189 23.8
Duzib128G0494 Durio zibethinus HOM05D000218 ORTHO05D000125 8.7e-06 56.6 77 32.5
FvH4_7g30960 Fragaria vesca HOM05D000218 ORTHO05D017941 8.7e-06 56.6 193 25.9
MBI02_g21870_MAGBIO Magnolia biondii HOM05D003286 ORTHO05D002463 8.7e-06 56.6 227 23.8
MD11G1226200 Malus domestica HOM05D000218 ORTHO05D000125 8.7e-06 56.6 127 27.6


User provided reference genes

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