Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 1.6e-118 429.5 222 100.0
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 2.3e-32 143.3 218 39.4
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 6.6e-32 141.7 223 36.3
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 5.6e-31 138.7 219 36.1
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 1.2e-30 137.5 221 34.8
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 6.2e-30 135.2 223 34.1
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 1.4e-29 134.0 223 35.4
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 3.1e-29 132.9 222 35.1
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 4.0e-29 132.5 221 33.5
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 5.2e-29 132.1 221 34.4
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 8.9e-29 131.3 225 33.3
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 2.6e-28 129.8 204 33.8
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 4.4e-28 129.0 225 32.9
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 4.4e-28 129.0 223 34.5
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 5.8e-28 128.6 221 32.6
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 7.6e-28 128.3 223 34.5
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 1.3e-27 127.5 221 33.9
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 1.7e-27 127.1 221 32.6
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 2.2e-27 126.7 228 34.6
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 2.2e-27 126.7 225 32.9
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 2.2e-27 126.7 225 32.4
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 2.2e-27 126.7 225 32.0
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 2.2e-27 126.7 219 32.9
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 2.9e-27 126.3 212 34.0
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 3.8e-27 125.9 210 35.7
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 4.9e-27 125.6 225 32.9
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 6.4e-27 125.2 221 32.6
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 6.4e-27 125.2 223 33.2
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 6.4e-27 125.2 223 34.1
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 8.4e-27 124.8 222 32.4
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 8.4e-27 124.8 218 31.2
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 8.4e-27 124.8 218 31.2
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 8.4e-27 124.8 225 32.4
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 1.1e-26 124.4 223 33.6
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 1.4e-26 124.0 225 32.9
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 1.9e-26 123.6 210 32.9
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 1.9e-26 123.6 210 32.9
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 1.9e-26 123.6 225 32.4
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 2.4e-26 123.2 213 32.9
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 2.4e-26 123.2 213 32.9
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 3.2e-26 122.9 221 32.6
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 3.2e-26 122.9 219 32.4
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 3.2e-26 122.9 191 36.1
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.1e-26 122.5 221 32.6
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 7.1e-26 121.7 223 30.9
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 7.1e-26 121.7 204 32.4
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 9.2e-26 121.3 206 35.0
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 9.2e-26 121.3 206 35.0
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 9.2e-26 121.3 210 34.3
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 1.2e-25 120.9 222 33.8
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 1.2e-25 120.9 223 33.2
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 1.6e-25 120.6 218 32.1
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 2.7e-25 119.8 223 32.3
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 2.7e-25 119.8 225 32.0
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 3.5e-25 119.4 213 33.8
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 3.5e-25 119.4 213 32.9
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 3.5e-25 119.4 212 32.1
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 4.6e-25 119.0 206 32.0
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 4.6e-25 119.0 223 32.3
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 6.0e-25 118.6 213 34.3
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 6.0e-25 118.6 223 32.3
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 1.0e-24 117.9 221 31.7
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 1.3e-24 117.5 222 31.5
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 1.7e-24 117.1 210 34.8
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 1.7e-24 117.1 209 31.6
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 2.3e-24 116.7 242 30.2
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 2.3e-24 116.7 223 31.4
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 5.1e-24 115.5 223 31.4
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 6.6e-24 115.2 219 30.6
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 6.6e-24 115.2 223 30.5
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 8.6e-24 114.8 209 31.6
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 1.1e-23 114.4 206 31.6
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 1.5e-23 114.0 219 30.6
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 1.9e-23 113.6 225 30.2
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 2.5e-23 113.2 225 30.2
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 3.3e-23 112.8 223 30.5
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 4.3e-23 112.5 223 30.5
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 5.6e-23 112.1 221 29.9
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 7.3e-23 111.7 225 29.8
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 1.6e-22 110.5 181 36.5
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 2.8e-22 109.8 223 30.9
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 3.6e-22 109.4 232 32.3
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 6.2e-22 108.6 215 31.2
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 1.4e-21 107.5 206 32.0
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 2.4e-21 106.7 205 31.2
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 4.0e-21 105.9 197 34.0
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 5.2e-21 105.5 268 28.7
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 1.2e-20 104.4 190 32.6
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 1.2e-20 104.4 218 33.0
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.2e-20 104.4 256 29.7
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 3.4e-20 102.8 223 30.9
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 4.4e-20 102.4 230 30.4
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 9.9e-20 101.3 233 29.2
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 1.3e-19 100.9 225 30.7
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 8.4e-19 98.2 231 29.9
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 1.4e-18 97.4 220 29.1
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 4.2e-18 95.9 206 30.1
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 6.6e-16 88.6 176 29.5
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.3e-15 86.3 210 31.4
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.3e-14 84.3 206 30.6
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 3.6e-14 82.8 262 28.2
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 3.6e-14 82.8 165 30.9
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 6.2e-14 82.0 158 31.0
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 1.8e-13 80.5 117 36.8
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 1.8e-13 80.5 175 26.9
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 9.0e-13 78.2 176 26.1
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 2.6e-12 76.6 153 34.0
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 2.6e-12 76.6 111 37.8
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 7.6e-12 75.1 202 29.7
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 4.9e-11 72.4 147 28.6
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 4.2e-10 69.3 124 31.5
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 7.9e-09 65.1 191 27.2
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 1.8e-08 63.9 146 27.4
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 1.8e-08 63.9 279 24.4
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 3.0e-08 63.2 113 31.0


User provided reference genes

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