Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0065s0033 Marchantia polymorpha HOM05D005876 ORTHO05D007326 1.9e-159 565.8 297 100.0
Pp3c22_13580 Physcomitrium patens HOM05D005876 ORTHO05D007326 4.1e-45 186.0 230 44.8
AagrBONN_evm.TU.Sc2ySwM_117.3742 Anthoceros agrestis HOM05D005876 ORTHO05D007326 2.6e-44 183.3 296 40.5
SMO302G0051 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 7.2e-42 175.3 300 41.3
CSS0006806 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 1.7e-35 154.1 241 39.4
SEGI_25369 Sequoiadendron giganteum HOM05D005876 ORTHO05D007326 2.2e-35 153.7 222 40.5
CSS0011524 Camellia sinensis var. sinensis HOM05D005876 ORTHO05D007326 5.5e-34 149.1 302 34.8
ATR0618G001 Amborella trichopoda HOM05D005876 ORTHO05D007326 9.4e-34 148.3 290 36.2
CAN.G1676.1 Capsicum annuum HOM05D005876 ORTHO05D007326 5.2e-32 142.5 299 33.1
MBI19_g11838_MAGBIO Magnolia biondii HOM05D005876 ORTHO05D007326 6.8e-32 142.1 318 34.0
SMO353G0015 Selaginella moellendorffii HOM05D005876 ORTHO05D007326 2.0e-31 140.6 303 37.3
Lalb_Chr01g0022971 Lupinus albus HOM05D005876 ORTHO05D007326 2.6e-31 140.2 297 35.0
CDE05G1905 Ceratophyllum demersum HOM05D005876 ORTHO05D007326 3.4e-31 139.8 255 36.5
vmacro08700 Vaccinium macrocarpon HOM05D005876 ORTHO05D007326 4.4e-31 139.4 205 39.5
HPP92_026974 Vanilla planifolia HOM05D005876 ORTHO05D007326 4.4e-31 139.4 284 34.2
CANSAT80G1885 Cannabis sativa HOM05D005876 ORTHO05D007326 7.5e-31 138.7 295 32.9
CiPaw.09G179800 Carya illinoinensis HOM05D005876 ORTHO05D007326 7.5e-31 138.7 223 36.8
GSVIVG01025628001 Vitis vinifera HOM05D005876 ORTHO05D007326 7.5e-31 138.7 256 36.7
Aqoxy4G03207 Aquilegia oxysepala HOM05D005876 ORTHO05D007326 1.3e-30 137.9 229 37.1
HPP92_015422 Vanilla planifolia HOM05D005876 ORTHO05D007326 1.3e-30 137.9 288 33.7
TAR633G1288 Trochodendron aralioides HOM05D005876 ORTHO05D007326 4.8e-30 136.0 309 32.0
PGSC0003DMG400001766 Solanum tuberosum HOM05D005876 ORTHO05D007326 1.4e-29 134.4 303 33.3
EL10Ac7g17355 Beta vulgaris HOM05D005876 ORTHO05D007326 2.4e-29 133.7 285 33.3
Duzib093G1198 Durio zibethinus HOM05D005876 ORTHO05D007326 2.4e-29 133.7 278 32.0
Actinidia13103 Actinidia chinensis HOM05D005876 ORTHO05D007326 5.4e-29 132.5 254 35.4
ClCG10G020530 Citrullus lanatus HOM05D005876 ORTHO05D007326 5.4e-29 132.5 156 43.6
Hma1.2p1_0350F.1_g132760 Hydrangea macrophylla HOM05D005876 ORTHO05D007326 5.4e-29 132.5 289 33.2
QL07p024280 Quercus lobata HOM05D005876 ORTHO05D007326 5.4e-29 132.5 292 33.6
Zm00001eb290190 Zea mays HOM05D005876 ORTHO05D007326 5.4e-29 132.5 328 31.7
MD12G1123900 Malus domestica HOM05D005876 ORTHO05D007326 1.2e-28 131.3 283 31.1
Nn2g10678 Nelumbo nucifera HOM05D005876 ORTHO05D007326 1.2e-28 131.3 309 32.0
Sopen09g002270 Solanum pennellii HOM05D005876 ORTHO05D007326 1.2e-28 131.3 310 32.3
TAR375G0626 Trochodendron aralioides HOM05D005876 ORTHO05D007326 1.2e-28 131.3 219 36.5
Eucgr.D00282 Eucalyptus grandis HOM05D005876 ORTHO05D007326 1.6e-28 131.0 286 31.8
Glyma.11G012100 Glycine max HOM05D005876 ORTHO05D007326 2.0e-28 130.6 223 36.3
Solyc09g007370.4 Solanum lycopersicum HOM05D005876 ORTHO05D007326 2.0e-28 130.6 310 32.6
Gohir.A01G216800 Gossypium hirsutum HOM05D005876 ORTHO05D007326 2.7e-28 130.2 301 31.9
Manes.09G081419 Manihot esculenta HOM05D005876 ORTHO05D007326 2.7e-28 130.2 292 32.5
Os05g0472300 Oryza sativa ssp. japonica HOM05D005876 ORTHO05D007326 2.7e-28 130.2 312 31.4
Cc11_g02990 Coffea canephora HOM05D005876 ORTHO05D007326 3.5e-28 129.8 260 33.8
Dinv37257 Davidia involucrata HOM05D005876 ORTHO05D007326 3.5e-28 129.8 240 32.5
Migut.J00418 Erythranthe guttata HOM05D005876 ORTHO05D007326 4.5e-28 129.4 300 32.3
Prupe.4G230000 Prunus persica HOM05D005876 ORTHO05D007326 4.5e-28 129.4 292 32.5
Gorai.002G249900 Gossypium raimondii HOM05D005876 ORTHO05D007326 7.7e-28 128.6 302 32.1
Atru.chr8.2559 Acer truncatum HOM05D005876 ORTHO05D007326 1.3e-27 127.9 275 32.0
CsaV3_3G035590 Cucumis sativus L. HOM05D005876 ORTHO05D007326 1.3e-27 127.9 301 32.6
FAN02G3306 Fragaria x ananassa HOM05D005876 ORTHO05D007326 1.3e-27 127.9 297 32.3
Gohir.D01G205600 Gossypium hirsutum HOM05D005876 ORTHO05D007326 1.3e-27 127.9 297 32.3
A05p03670 Brassica napus HOM05D005876 ORTHO05D007326 6.6e-27 125.6 219 32.9
FAN14G3435 Fragaria x ananassa HOM05D005876 ORTHO05D007326 6.6e-27 125.6 289 30.8
Nitab4.5_0001763g0100 Nicotiana tabacum HOM05D005876 ORTHO05D007326 6.6e-27 125.6 234 35.0
PSO063G0740 Papaver somniferum HOM05D005876 ORTHO05D007326 6.6e-27 125.6 253 34.4
BraA05t19352Z Brassica rapa HOM05D005876 ORTHO05D007326 1.1e-26 124.8 219 32.9
Lj1g0007669 Lotus japonicus HOM05D005876 ORTHO05D007326 1.5e-26 124.4 298 31.9
MSTRG.5723 Avicennia marina HOM05D005876 ORTHO05D007326 1.9e-26 124.0 277 33.2
C04p04270 Brassica napus HOM05D005876 ORTHO05D007326 2.5e-26 123.6 220 33.2
BolC4t22063H Brassica oleracea HOM05D005876 ORTHO05D007326 2.5e-26 123.6 220 33.2
LjContig00222g0022274 Lotus japonicus HOM05D005876 ORTHO05D007326 4.2e-26 122.9 298 30.9
Phvul.002G038100 Phaseolus vulgaris HOM05D005876 ORTHO05D007326 4.2e-26 122.9 299 32.8
Thecc.05G054500 Theobroma cacao HOM05D005876 ORTHO05D007326 4.2e-26 122.9 308 30.5
HanXRQChr07g0195281 Helianthus annuus HOM05D005876 ORTHO05D007326 7.2e-26 122.1 287 31.4
QL03p054300 Quercus lobata HOM05D005876 ORTHO05D007326 7.2e-26 122.1 292 32.5
DCAR_009286 Daucus carota HOM05D005876 ORTHO05D007326 9.5e-26 121.7 145 42.8
Potri.001G033900 Populus trichocarpa HOM05D005876 ORTHO05D007326 9.5e-26 121.7 249 32.1
ECA238G3410 Erigeron canadensis HOM05D005876 ORTHO05D007326 1.2e-25 121.3 163 39.3
Sp4g25310 Schrenkiella parvula HOM05D005876 ORTHO05D007326 1.2e-25 121.3 288 30.9
THA.LOC104826952 Tarenaya hassleriana HOM05D005876 ORTHO05D007326 1.2e-25 121.3 287 32.1
MELO3C009318.2 Cucumis melo HOM05D005876 ORTHO05D007326 2.8e-25 120.2 310 31.9
Nitab4.5_0005274g0030 Nicotiana tabacum HOM05D005876 ORTHO05D007326 2.8e-25 120.2 230 34.3
TPR.G38017 Trifolium pratense HOM05D005876 ORTHO05D007326 2.8e-25 120.2 276 31.9
Sed0002034 Sechium edule HOM05D005876 ORTHO05D007326 3.6e-25 119.8 301 30.6
Peaxi162Scf01604g00016 Petunia axillaris HOM05D005876 ORTHO05D007326 6.1e-25 119.0 249 35.7
SalBow3G3945 Salvia bowleyana HOM05D005876 ORTHO05D007326 1.8e-24 117.5 290 29.3
RcHm_v2.0_Chr3g0468881 Rosa chinensis HOM05D005876 ORTHO05D007326 2.3e-24 117.1 278 29.1
SalBow3G2410 Salvia bowleyana HOM05D005876 ORTHO05D007326 2.3e-24 117.1 290 29.3
Lsat_1_v5_gn_3_120281 Lactuca sativa HOM05D005876 ORTHO05D007326 3.0e-24 116.7 203 34.5
Carub.0004s2566 Capsella rubella HOM05D005876 ORTHO05D007326 4.0e-24 116.3 289 29.1
FAN09G4005 Fragaria x ananassa HOM05D005876 ORTHO05D007326 4.0e-24 116.3 259 32.4
Thhalv10001741m.g Eutrema salsugineum HOM05D005876 ORTHO05D007326 6.8e-24 115.5 221 31.7
MD04G1104000 Malus domestica HOM05D005876 ORTHO05D007326 6.8e-24 115.5 296 29.7
Aa31LG1G25010 Aethionema arabicum HOM05D005876 ORTHO05D007326 2.0e-23 114.0 287 31.0
FvH4_6g15400 Fragaria vesca HOM05D005876 ORTHO05D007326 2.0e-23 114.0 278 29.9
AUR62040047 Chenopodium quinoa HOM05D005876 ORTHO05D007326 2.6e-23 113.6 261 35.2
AL4G41850 Arabidopsis lyrata HOM05D005876 ORTHO05D007326 3.4e-23 113.2 283 29.7
Sc23g0005710 Simmondsia chinensis HOM05D005876 ORTHO05D007326 3.4e-23 113.2 294 29.6
CARHR138250 Cardamine hirsuta HOM05D005876 ORTHO05D007326 4.4e-23 112.8 288 29.2
Ciclev10012269m.g Citrus clementina HOM05D005876 ORTHO05D007326 5.7e-23 112.5 311 28.3
SGA_v2.0_scaffold75G24879 Striga asiatica HOM05D005876 ORTHO05D007326 9.8e-23 111.7 312 29.5
Lj2C107T12 Lonicera japonica HOM05D005876 ORTHO05D007326 2.2e-22 110.5 263 33.1
AT2G43190 Arabidopsis thaliana HOM05D005876 ORTHO05D007326 2.8e-22 110.2 284 28.5
Sabra01G0024100 Salix brachista HOM05D001063 ORTHO05D000986 8.3e-22 108.6 194 33.0
TWI74G1051 Tripterygium wilfordii HOM05D005876 ORTHO05D007326 8.3e-22 108.6 192 33.9
Cfa017510 Carpinus fangiana HOM05D000666 ORTHO05D001727 1.1e-21 108.2 225 33.8
Psat0s769g0080 Pisum sativum HOM05D005876 ORTHO05D007326 1.8e-21 107.5 260 31.5
arahy.Tifrunner.gnm1.ann1.SSK647 Arachis hypogaea HOM05D005876 ORTHO05D007326 4.1e-21 106.3 198 33.8
arahy.Tifrunner.gnm1.ann1.09MUKR Arachis hypogaea HOM05D005876 ORTHO05D007326 7.0e-21 105.5 119 45.4
unitig_32.g11040 Utricularia gibba HOM05D005876 ORTHO05D007326 2.7e-20 103.6 107 44.9
Zm00001eb286610 Zea mays HOM05D005876 ORTHO05D007326 5.9e-20 102.4 265 31.3
VMungo1215G0672 Vigna mungo HOM05D005876 ORTHO05D007326 2.3e-19 100.5 268 32.5
Peaxi162Scf00005g04511 Petunia axillaris HOM05D005876 ORTHO05D007326 8.6e-19 98.6 252 30.6
Zm00001eb270830 Zea mays HOM05D005876 ORTHO05D007326 1.9e-18 97.4 317 30.0
Medtr5g007880 Medicago truncatula HOM05D005876 ORTHO05D007326 5.6e-18 95.9 100 47.0
Haze_20644 Corylus avellana HOM05D005876 ORTHO05D007326 6.1e-17 92.4 247 29.6
Nitab4.5_0000669g0240 Nicotiana tabacum HOM05D005876 ORTHO05D007326 1.0e-16 91.7 187 35.8
PSO063G1014 Papaver somniferum HOM05D005876 ORTHO05D007326 2.0e-15 87.4 218 31.7
TAR636G2100 Trochodendron aralioides HOM05D005876 ORTHO05D007326 2.0e-15 87.4 140 35.7
PGSC0003DMG400004235 Solanum tuberosum HOM05D005876 ORTHO05D007326 2.2e-14 84.0 103 38.8
CBR_g48398 Chara braunii HOM05D005876 ORTHO05D007326 4.9e-14 82.8 145 34.5
Psat4g011240 Pisum sativum HOM05D005876 ORTHO05D007326 3.5e-12 76.6 95 45.3
SHI12568 Sapria himalayana HOM05D005876 ORTHO05D007326 6.0e-12 75.9 137 35.0
Cfa025603 Carpinus fangiana HOM05D005876 ORTHO05D007326 7.8e-12 75.5 239 26.4
Nitab4.5_0002614g0010 Nicotiana tabacum HOM05D005876 ORTHO05D007326 1.3e-11 74.7 180 32.8
Ca_24451_v3 Cicer arietinum L. HOM05D005876 ORTHO05D007326 2.3e-11 73.9 272 27.6
Gorai.004G066200 Gossypium raimondii HOM05D005876 ORTHO05D007326 2.3e-11 73.9 106 34.9
Duzib106G1607 Durio zibethinus HOM05D005876 ORTHO05D007326 3.0e-11 73.6 229 27.9
PGR083G2396 Punica granatum HOM05D005876 ORTHO05D007326 3.0e-11 73.6 136 32.4
Cpa.g.sc45.33 Carica papaya HOM05D005876 ORTHO05D007326 2.5e-10 70.5 296 25.3
COL.COLO4_06720 Corchorus olitorius HOM05D005876 ORTHO05D007326 4.3e-10 69.7 239 27.2
Glyma.01G229300 Glycine max HOM05D005876 ORTHO05D007326 4.3e-10 69.7 136 32.4
Ah.16g107680 Amaranthus hybridus HOM05D005876 ORTHO05D007326 2.3e-08 63.9 224 31.7
Oeu060085.1 Olea europaea HOM05D005876 ORTHO05D007326 2.0e-07 60.8 272 24.3
Dinv08367 Davidia involucrata HOM05D005876 ORTHO05D007326 4.4e-07 59.7 59 47.5
Dinv35712 Davidia involucrata HOM05D005876 ORTHO05D007326 4.4e-07 59.7 59 47.5
TPR.G5314 Trifolium pratense HOM05D000002 ORTHO05D000047 4.4e-07 59.7 68 42.6


User provided reference genes

Program Settings