Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0054s0011 Marchantia polymorpha HOM05D007256 ORTHO05D009109 7.6e-69 263.8 147 100.0
Zm00001eb333750 Zea mays HOM05D007256 ORTHO05D009109 5.9e-29 131.3 167 43.7
Pp3c18_1910 Physcomitrium patens HOM05D007256 ORTHO05D009109 2.5e-27 125.9 151 44.4
TAR362G0938 Trochodendron aralioides HOM05D007256 ORTHO05D009109 4.2e-27 125.2 152 42.8
Migut.B00859 Erythranthe guttata HOM05D007256 ORTHO05D009109 7.2e-27 124.4 161 42.9
GSVIVG01031300001 Vitis vinifera HOM05D007256 ORTHO05D009109 7.2e-27 124.4 153 43.1
Phvul.007G203900 Phaseolus vulgaris HOM05D007256 ORTHO05D009109 9.4e-27 124.0 148 45.9
Oeu060662.1 Olea europaea HOM05D007256 ORTHO05D009109 2.1e-26 122.9 161 42.2
PGSC0003DMG400002748 Solanum tuberosum HOM05D007256 ORTHO05D009109 6.1e-26 121.3 153 42.5
CAN.G1374.8 Capsicum annuum HOM05D007256 ORTHO05D009109 8.0e-26 120.9 153 42.5
Nn4g25434 Nelumbo nucifera HOM05D007256 ORTHO05D009109 8.0e-26 120.9 151 43.7
Peaxi162Scf00357g00431 Petunia axillaris HOM05D007256 ORTHO05D009109 8.0e-26 120.9 154 42.2
CANSAT54G0501 Cannabis sativa HOM05D007256 ORTHO05D009109 1.0e-25 120.6 155 43.2
Nitab4.5_0002783g0030 Nicotiana tabacum HOM05D007256 ORTHO05D009109 1.0e-25 120.6 153 41.8
QL03p009011 Quercus lobata HOM05D007256 ORTHO05D009109 1.4e-25 120.2 153 41.2
CiPaw.07G034000 Carya illinoinensis HOM05D007256 ORTHO05D009109 1.8e-25 119.8 153 42.5
Lsat_1_v5_gn_2_17440 Lactuca sativa HOM05D007256 ORTHO05D009109 1.8e-25 119.8 152 42.8
QL03p009202 Quercus lobata HOM05D007256 ORTHO05D009109 1.8e-25 119.8 153 40.5
VMungo0720G0365 Vigna mungo HOM05D007256 ORTHO05D009109 1.8e-25 119.8 148 44.6
Sopen01g044450 Solanum pennellii HOM05D007256 ORTHO05D009109 2.3e-25 119.4 153 42.5
Haze_04019 Corylus avellana HOM05D007256 ORTHO05D009109 4.0e-25 118.6 155 43.2
Nitab4.5_0005710g0050 Nicotiana tabacum HOM05D007256 ORTHO05D009109 4.0e-25 118.6 153 43.1
MSTRG.20366 Avicennia marina HOM05D007256 ORTHO05D009109 6.8e-25 117.9 159 40.9
Solyc01g100990.3 Solanum lycopersicum HOM05D007256 ORTHO05D009109 6.8e-25 117.9 153 41.8
EL10Ac4g09530 Beta vulgaris HOM05D007256 ORTHO05D009109 8.8e-25 117.5 157 43.9
ClCG03G017800 Citrullus lanatus HOM05D007256 ORTHO05D009109 8.8e-25 117.5 153 39.9
PSO761G0366 Papaver somniferum HOM05D007256 ORTHO05D009109 1.2e-24 117.1 154 40.9
Hma1.2p1_0052F.1_g030520 Hydrangea macrophylla HOM05D007256 ORTHO05D009109 1.5e-24 116.7 159 40.9
Lalb_Chr02g0147641 Lupinus albus HOM05D007256 ORTHO05D009109 1.5e-24 116.7 147 40.1
PSO210G0513 Papaver somniferum HOM05D007256 ORTHO05D009109 1.5e-24 116.7 154 40.3
Cfa006739 Carpinus fangiana HOM05D007256 ORTHO05D009109 2.0e-24 116.3 153 41.8
Cc02_g35540 Coffea canephora HOM05D007256 ORTHO05D009109 2.6e-24 115.9 163 40.5
Eucgr.B01795 Eucalyptus grandis HOM05D007256 ORTHO05D009109 3.4e-24 115.5 155 40.6
Prupe.6G307100 Prunus persica HOM05D007256 ORTHO05D009109 3.4e-24 115.5 153 39.9
RcHm_v2.0_Chr3g0458031 Rosa chinensis HOM05D007256 ORTHO05D009109 3.4e-24 115.5 152 43.4
Ciclev10012993m.g Citrus clementina HOM05D007256 ORTHO05D009109 2.8e-23 112.5 157 40.8
SGA_v2.0_scaffold438G51636 Striga asiatica HOM05D007256 ORTHO05D009109 2.8e-23 112.5 157 38.2
ECA238G0534 Erigeron canadensis HOM05D007256 ORTHO05D009109 4.8e-23 111.7 159 39.0
HanXRQChr14g0433581 Helianthus annuus HOM05D007256 ORTHO05D009109 4.8e-23 111.7 152 41.4
Aqoxy2G02591 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 8.3e-23 110.9 163 41.7
COL.COLO4_05498 Corchorus olitorius HOM05D007256 ORTHO05D009109 8.3e-23 110.9 160 38.8
DCAR_002110 Daucus carota HOM05D007256 ORTHO05D009109 8.3e-23 110.9 147 40.8
QL03p009259 Quercus lobata HOM05D007256 ORTHO05D009109 8.3e-23 110.9 153 40.5
Duzib177G0019 Durio zibethinus HOM05D007256 ORTHO05D009109 1.8e-22 109.8 156 39.1
FAN09G0386 Fragaria x ananassa HOM05D007256 ORTHO05D009109 1.8e-22 109.8 152 41.4
SalBow7G1589 Salvia bowleyana HOM05D007256 ORTHO05D009109 1.8e-22 109.8 178 37.1
arahy.Tifrunner.gnm1.ann1.Q851GZ Arachis hypogaea HOM05D007256 ORTHO05D009109 2.4e-22 109.4 162 42.0
SEGI_23053 Sequoiadendron giganteum HOM05D007256 ORTHO05D009109 2.4e-22 109.4 153 40.5
Thecc.05G327400 Theobroma cacao HOM05D007256 ORTHO05D009109 2.4e-22 109.4 156 39.1
FAN14G3866 Fragaria x ananassa HOM05D007256 ORTHO05D009109 3.1e-22 109.0 151 40.4
arahy.Tifrunner.gnm1.ann1.H7RZSB Arachis hypogaea HOM05D007256 ORTHO05D009109 4.1e-22 108.6 158 40.5
AUR62006795 Chenopodium quinoa HOM05D007256 ORTHO05D009109 4.1e-22 108.6 164 39.6
CsaV3_1G037970 Cucumis sativus L. HOM05D007256 ORTHO05D009109 4.1e-22 108.6 159 39.0
Glyma.10G144700 Glycine max HOM05D007256 ORTHO05D009109 4.1e-22 108.6 149 39.6
Gohir.A13G030200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 7.0e-22 107.8 153 41.2
Manes.08G108700 Manihot esculenta HOM05D007256 ORTHO05D009109 7.0e-22 107.8 160 39.4
FvH4_6g08160 Fragaria vesca HOM05D007256 ORTHO05D009109 9.1e-22 107.5 151 39.1
Gohir.D13G028200 Gossypium hirsutum HOM05D007256 ORTHO05D009109 9.1e-22 107.5 153 39.9
Gorai.013G032200 Gossypium raimondii HOM05D007256 ORTHO05D009109 9.1e-22 107.5 153 39.9
FAN02G0906 Fragaria x ananassa HOM05D007256 ORTHO05D009109 1.2e-21 107.1 152 40.8
Lj5g0000046 Lotus japonicus HOM05D007256 ORTHO05D009109 1.6e-21 106.7 158 37.3
Potri.013G004801 Populus trichocarpa HOM05D007256 ORTHO05D009109 1.6e-21 106.7 156 38.5
Ca_10190_v3 Cicer arietinum L. HOM05D007256 ORTHO05D009109 2.0e-21 106.3 152 38.8
Atru.chr12.1603 Acer truncatum HOM05D007256 ORTHO05D009109 2.7e-21 105.9 175 39.4
Duzib177G1002 Durio zibethinus HOM05D007256 ORTHO05D009109 2.7e-21 105.9 157 37.6
TWI12G0874 Tripterygium wilfordii HOM05D007256 ORTHO05D009109 2.7e-21 105.9 159 37.7
CDE08G0276 Ceratophyllum demersum HOM05D007256 ORTHO05D009109 4.5e-21 105.1 157 41.4
MD12G1202300 Malus domestica HOM05D007256 ORTHO05D009109 7.7e-21 104.4 148 38.5
TPR.G2616 Trifolium pratense HOM05D007256 ORTHO05D009109 2.9e-20 102.4 146 38.4
Os01g0252200 Oryza sativa ssp. japonica HOM05D007256 ORTHO05D009109 1.9e-19 99.8 168 34.5
Gorai.001G184000 Gossypium raimondii HOM05D007256 ORTHO05D009109 2.5e-19 99.4 147 38.8
Medtr1g084750 Medicago truncatula HOM05D007256 ORTHO05D009109 3.3e-19 99.0 149 37.6
Thhalv10005088m.g Eutrema salsugineum HOM05D007256 ORTHO05D009109 5.5e-19 98.2 151 37.7
Sabra13G0003900 Salix brachista HOM05D007256 ORTHO05D009109 5.5e-19 98.2 156 37.2
Cpa.g.sc48.207 Carica papaya HOM05D007256 ORTHO05D009109 9.5e-19 97.4 147 38.8
unitig_699.g19800 Utricularia gibba HOM05D007256 ORTHO05D009109 1.2e-18 97.1 180 36.7
ATR0693G354 Amborella trichopoda HOM05D007256 ORTHO05D009109 1.6e-18 96.7 77 54.5
MELO3C015247.2 Cucumis melo HOM05D000487 ORTHO05D000405 1.6e-18 96.7 153 35.9
HPP92_001218 Vanilla planifolia HOM05D007256 ORTHO05D009109 2.8e-18 95.9 155 36.8
THA.LOC104821748 Tarenaya hassleriana HOM05D007256 ORTHO05D009109 3.6e-18 95.5 151 39.7
BcaB04g19715 Brassica carinata HOM05D007256 ORTHO05D009109 6.1e-18 94.7 154 35.1
Psat1g134200 Pisum sativum HOM05D007256 ORTHO05D009109 6.1e-18 94.7 152 35.5
A09p05700 Brassica napus HOM05D007256 ORTHO05D009109 2.3e-17 92.8 155 35.5
Sed0013353 Sechium edule HOM05D007256 ORTHO05D009109 5.2e-17 91.7 149 36.9
Hund07289 Selenicereus undatus HOM05D007256 ORTHO05D009109 6.8e-17 91.3 81 50.6
AL6G38610 Arabidopsis lyrata HOM05D007256 ORTHO05D009109 1.2e-16 90.5 156 34.6
BcaC04g23634 Brassica carinata HOM05D007256 ORTHO05D009109 2.0e-16 89.7 151 35.8
C09p06290 Brassica napus HOM05D007256 ORTHO05D009109 2.0e-16 89.7 151 35.8
TPR.G2644 Trifolium pratense HOM05D007256 ORTHO05D009109 3.4e-16 89.0 154 35.1
Sc09g0002500 Simmondsia chinensis HOM05D007256 ORTHO05D009109 2.2e-15 86.3 110 42.7
Aa31LG11G9900 Aethionema arabicum HOM05D007256 ORTHO05D009109 2.4e-14 82.8 156 35.9
BolC9t53549H Brassica oleracea HOM05D007256 ORTHO05D009109 5.4e-14 81.6 170 30.6
BraA09t36210Z Brassica rapa HOM05D007256 ORTHO05D009109 5.4e-14 81.6 172 30.8
AT5G26749 Arabidopsis thaliana HOM05D007256 ORTHO05D009109 2.0e-13 79.7 175 30.3
Sp2g21240 Schrenkiella parvula HOM05D007256 ORTHO05D009109 1.3e-12 77.0 152 34.2
Carub.0006s2440 Capsella rubella HOM05D007256 ORTHO05D009109 1.9e-11 73.2 77 42.9
Ah.10g027130 Amaranthus hybridus HOM05D007256 ORTHO05D009109 4.7e-10 68.6 69 47.8
HPP92_001189 Vanilla planifolia HOM05D007256 ORTHO05D009109 2.3e-09 66.2 44 59.1
Aqoxy4G00797 Aquilegia oxysepala HOM05D007256 ORTHO05D009109 3.1e-09 65.9 147 33.3
Rhsim05G0121300 Rhododendron simsii HOM05D007256 ORTHO05D009109 6.8e-09 64.7 70 44.3
SHI06526 Sapria himalayana HOM05D007256 ORTHO05D009109 7.5e-08 61.2 43 53.5
vmacro19770 Vaccinium macrocarpon HOM05D007256 ORTHO05D009109 9.8e-08 60.8 41 58.5
Gohir.D01G139700 Gossypium hirsutum HOM05D007256 ORTHO05D009109 6.4e-07 58.2 126 31.7
FAN05G3272 Fragaria x ananassa HOM05D000487 ORTHO05D000405 1.4e-06 57.0 102 38.2
CARHR186830 Cardamine hirsuta HOM05D007256 ORTHO05D009109 1.9e-06 56.6 41 56.1


User provided reference genes

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