Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0043s0117 Marchantia polymorpha HOM05D006106 ORTHO05D007662 1.5e-277 959.9 977 100.0
Pp3c2_1940 Physcomitrium patens HOM05D006106 ORTHO05D007662 1.9e-43 182.2 133 63.2
Sc13g0001690 Simmondsia chinensis HOM05D006106 ORTHO05D007662 1.2e-40 172.9 130 61.5
Oeu008911.1 Olea europaea HOM05D006106 ORTHO05D007662 2.0e-40 172.2 137 56.2
Duzib128G0400 Durio zibethinus HOM05D006106 ORTHO05D007662 4.9e-39 167.5 130 60.0
Migut.J01752 Erythranthe guttata HOM05D006106 ORTHO05D007662 4.9e-39 167.5 130 56.2
SGA_v2.0_scaffold105G30404 Striga asiatica HOM05D001739 ORTHO05D006605 4.9e-39 167.5 131 58.0
GSVIVG01033271001 Vitis vinifera HOM05D006106 ORTHO05D007662 4.9e-39 167.5 130 60.0
TWI74G1340 Tripterygium wilfordii HOM05D006106 ORTHO05D007662 6.5e-39 167.2 138 56.5
CDE08G0810 Ceratophyllum demersum HOM05D006106 ORTHO05D007662 8.4e-39 166.8 130 59.2
Dinv12500 Davidia involucrata HOM05D006106 ORTHO05D007662 8.4e-39 166.8 130 60.0
TAR623G1683 Trochodendron aralioides HOM05D006106 ORTHO05D007662 1.1e-38 166.4 138 56.5
Gohir.D05G352101 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.9e-38 165.6 130 59.2
Ciclev10004305m.g Citrus clementina HOM05D006106 ORTHO05D007662 2.5e-38 165.2 131 58.8
Gohir.A04G032500 Gossypium hirsutum HOM05D006106 ORTHO05D007662 2.5e-38 165.2 130 59.2
Actinidia39218 Actinidia chinensis HOM05D006106 ORTHO05D007662 3.2e-38 164.9 122 63.9
Atru.chr1.1113 Acer truncatum HOM05D006106 ORTHO05D007662 4.2e-38 164.5 128 60.2
ATR0188G017 Amborella trichopoda HOM05D006106 ORTHO05D007662 4.2e-38 164.5 133 57.1
Gorai.009G450600 Gossypium raimondii HOM05D006106 ORTHO05D007662 4.2e-38 164.5 129 58.9
Hma1.2p1_1041F.1_g251050 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 5.5e-38 164.1 130 58.5
Hma1.2p1_1041F.1_g251060 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 5.5e-38 164.1 130 58.5
PSO384G4415 Papaver somniferum HOM05D006106 ORTHO05D007662 5.5e-38 164.1 132 59.1
Gorai.009G383700 Gossypium raimondii HOM05D006106 ORTHO05D007662 9.3e-38 163.3 129 58.9
AagrBONN_evm.TU.Sc2ySwM_344.4225 Anthoceros agrestis HOM05D006106 ORTHO05D007662 1.2e-37 162.9 120 62.5
Nn7g36310 Nelumbo nucifera HOM05D006106 ORTHO05D007662 2.1e-37 162.2 130 58.5
Lju124C42G9 Lonicera japonica HOM05D006106 ORTHO05D007662 2.7e-37 161.8 122 59.8
PSO339G0809 Papaver somniferum HOM05D006106 ORTHO05D007662 3.5e-37 161.4 132 57.6
vmacro07842 Vaccinium macrocarpon HOM05D006106 ORTHO05D007662 7.9e-37 160.2 131 55.7
Gohir.D05G383800 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.0e-36 159.8 130 56.9
Hund24702 Selenicereus undatus HOM05D006106 ORTHO05D007662 1.0e-36 159.8 169 47.3
PGR004G1513 Punica granatum HOM05D006106 ORTHO05D007662 1.3e-36 159.5 131 58.8
CSS0036472 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 2.3e-36 158.7 131 56.5
CSS0045921 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 3.0e-36 158.3 131 56.5
CARHR136820 Cardamine hirsuta HOM05D006106 ORTHO05D007662 3.0e-36 158.3 130 56.9
Rhsim03G0026900 Rhododendron simsii HOM05D006106 ORTHO05D007662 3.0e-36 158.3 138 55.1
MELO3C009803.2 Cucumis melo HOM05D006106 ORTHO05D007662 3.9e-36 157.9 122 59.0
Prupe.7G058400 Prunus persica HOM05D006106 ORTHO05D007662 3.9e-36 157.9 130 56.2
Aa31LG1G23740 Aethionema arabicum HOM05D006106 ORTHO05D007662 5.1e-36 157.5 172 48.8
EL10Ac3g07098 Beta vulgaris HOM05D006106 ORTHO05D007662 5.1e-36 157.5 122 59.0
Lsat_1_v5_gn_9_30580 Lactuca sativa HOM05D006106 ORTHO05D007662 5.1e-36 157.5 171 46.8
Sopen04g007960 Solanum pennellii HOM05D006106 ORTHO05D007662 5.1e-36 157.5 178 46.6
Cfa016809 Carpinus fangiana HOM05D001739 ORTHO05D006605 8.7e-36 156.8 130 56.9
ClCG10G015760 Citrullus lanatus HOM05D006106 ORTHO05D007662 8.7e-36 156.8 133 54.9
Aqoxy1G00233 Aquilegia oxysepala HOM05D006106 ORTHO05D007662 1.5e-35 156.0 131 55.7
Sabra06G0034800 Salix brachista HOM05D006106 ORTHO05D007662 3.3e-35 154.8 139 55.4
MD12G1080100 Malus domestica HOM05D006106 ORTHO05D007662 4.3e-35 154.5 139 51.1
CsaV3_3G040680 Cucumis sativus L. HOM05D006106 ORTHO05D007662 5.7e-35 154.1 130 54.6
Potri.006G049900 Populus trichocarpa HOM05D006106 ORTHO05D007662 5.7e-35 154.1 139 54.7
Haze_19847 Corylus avellana HOM05D006106 ORTHO05D007662 7.4e-35 153.7 130 56.2
AUR62024458 Chenopodium quinoa HOM05D006106 ORTHO05D007662 9.7e-35 153.3 130 55.4
Sp4g23970 Schrenkiella parvula HOM05D006106 ORTHO05D007662 9.7e-35 153.3 130 55.4
Sed0021985 Sechium edule HOM05D006106 ORTHO05D007662 9.7e-35 153.3 130 55.4
Cc06_g17630 Coffea canephora HOM05D006106 ORTHO05D007662 1.3e-34 152.9 131 55.0
Thhalv10016262m.g Eutrema salsugineum HOM05D006106 ORTHO05D007662 1.6e-34 152.5 130 56.2
HPP92_011279 Vanilla planifolia HOM05D006106 ORTHO05D007662 1.6e-34 152.5 130 53.8
A05p02440 Brassica napus HOM05D006106 ORTHO05D007662 2.2e-34 152.1 170 46.5
HanXRQChr10g0296661 Helianthus annuus HOM05D006106 ORTHO05D007662 2.2e-34 152.1 130 53.8
Manes.08G051400 Manihot esculenta HOM05D006106 ORTHO05D007662 2.2e-34 152.1 131 57.3
C04p02890 Brassica napus HOM05D006106 ORTHO05D007662 2.8e-34 151.8 170 46.5
BolC4t21929H Brassica oleracea HOM05D006106 ORTHO05D007662 2.8e-34 151.8 170 46.5
AL4G40030 Arabidopsis lyrata HOM05D006106 ORTHO05D007662 3.7e-34 151.4 130 54.6
CAN.G676.31 Capsicum annuum HOM05D006106 ORTHO05D007662 3.7e-34 151.4 132 53.0
Eucgr.A02342 Eucalyptus grandis HOM05D006106 ORTHO05D007662 4.8e-34 151.0 119 58.8
HPP92_011301 Vanilla planifolia HOM05D006106 ORTHO05D007662 4.8e-34 151.0 130 53.8
AUR62026047 Chenopodium quinoa HOM05D006106 ORTHO05D007662 6.3e-34 150.6 130 55.4
BraA05t19238Z Brassica rapa HOM05D006106 ORTHO05D007662 8.2e-34 150.2 170 45.9
AT2G41720 Arabidopsis thaliana HOM05D006106 ORTHO05D007662 1.4e-33 149.4 130 53.8
arahy.Tifrunner.gnm1.ann1.4I0CBR Arachis hypogaea HOM05D006106 ORTHO05D007662 3.1e-33 148.3 122 58.2
arahy.Tifrunner.gnm1.ann1.HSF0DX Arachis hypogaea HOM05D006106 ORTHO05D007662 3.1e-33 148.3 122 58.2
DCAR_009064 Daucus carota HOM05D006106 ORTHO05D007662 3.1e-33 148.3 108 59.3
Nitab4.5_0000586g0120 Nicotiana tabacum HOM05D006106 ORTHO05D007662 4.1e-33 147.9 133 53.4
Lj1g0017753 Lotus japonicus HOM05D006106 ORTHO05D007662 6.9e-33 147.1 130 56.2
QL07p000909 Quercus lobata HOM05D006106 ORTHO05D007662 1.2e-32 146.4 128 53.9
Ah.04g151600 Amaranthus hybridus HOM05D006106 ORTHO05D007662 2.0e-32 145.6 210 40.0
ECA247G0166 Erigeron canadensis HOM05D001739 ORTHO05D006605 2.6e-32 145.2 139 48.9
Lalb_Chr01g0017341 Lupinus albus HOM05D006106 ORTHO05D007662 4.5e-32 144.4 122 59.0
VMungo1383G2820 Vigna mungo HOM05D006106 ORTHO05D007662 4.5e-32 144.4 122 59.0
Glyma.03G136200 Glycine max HOM05D006106 ORTHO05D007662 5.9e-32 144.1 133 54.9
Phvul.001G131500 Phaseolus vulgaris HOM05D006106 ORTHO05D007662 7.6e-32 143.7 108 63.0
Zm00001eb325040 Zea mays HOM05D006106 ORTHO05D007662 6.5e-31 140.6 134 51.5
FvH4_6g24060 Fragaria vesca HOM05D006106 ORTHO05D007662 1.9e-30 139.0 131 48.9
FAN05G2558 Fragaria x ananassa HOM05D006106 ORTHO05D007662 1.9e-30 139.0 131 48.9
RcHm_v2.0_Chr3g0482651 Rosa chinensis HOM05D006106 ORTHO05D007662 5.5e-30 137.5 122 52.5
Ca_15068_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 2.7e-29 135.2 122 52.5
Medtr7g091410 Medicago truncatula HOM05D006106 ORTHO05D007662 2.7e-29 135.2 131 51.1
TPR.G3692 Trifolium pratense HOM05D006106 ORTHO05D007662 2.7e-29 135.2 175 44.6
COL.COLO4_28304 Corchorus olitorius HOM05D006106 ORTHO05D007662 4.6e-29 134.4 113 56.6
Glyma.19G138101 Glycine max HOM05D006106 ORTHO05D007662 7.9e-29 133.7 132 52.3
CBR_g50368 Chara braunii HOM05D006106 ORTHO05D007662 8.8e-28 130.2 150 44.7
QL07p000892 Quercus lobata HOM05D006106 ORTHO05D007662 8.8e-28 130.2 120 51.7
Psat3g074120 Pisum sativum HOM05D006106 ORTHO05D007662 4.3e-27 127.9 176 42.0
Cpa.g.sc224.2 Carica papaya HOM05D006106 ORTHO05D007662 1.8e-25 122.5 130 48.5
Carub.0004s2400 Capsella rubella HOM05D006106 ORTHO05D007662 1.5e-24 119.4 95 55.8
Nitab4.5_0009615g0030 Nicotiana tabacum HOM05D006106 ORTHO05D007662 1.3e-23 116.3 132 43.9
CiPaw.10G033900 Carya illinoinensis HOM05D006106 ORTHO05D007662 9.1e-17 93.6 67 61.2
MBI17_g23175_MAGBIO Magnolia biondii HOM05D006106 ORTHO05D007662 1.3e-15 89.7 82 54.9
Peaxi162Scf00130g00324 Petunia axillaris HOM05D006106 ORTHO05D007662 3.8e-15 88.2 64 62.5
Gorai.003G091300 Gossypium raimondii HOM05D006106 ORTHO05D007662 5.0e-15 87.8 66 57.6
Gohir.D05G383766 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.2e-13 83.2 137 32.1
Gohir.D05G352075 Gossypium hirsutum HOM05D006106 ORTHO05D007662 2.1e-13 82.4 137 32.1
BcaNung06815 Brassica carinata HOM05D006106 ORTHO05D007662 6.1e-13 80.9 67 58.2
Rhsim03G0025700 Rhododendron simsii HOM05D006106 ORTHO05D007662 6.1e-13 80.9 131 37.4
Thecc.05G152200 Theobroma cacao HOM05D006106 ORTHO05D007662 8.0e-13 80.5 141 30.5
CiPaw.10G034000 Carya illinoinensis HOM05D006106 ORTHO05D007662 1.8e-12 79.3 115 32.2
Ca_08448_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 1.5e-11 76.3 126 28.6
Actinidia09323 Actinidia chinensis HOM05D001739 ORTHO05D006605 1.7e-10 72.8 70 52.9
FAN14G5662 Fragaria x ananassa HOM05D006106 ORTHO05D007662 6.3e-10 70.9 139 25.2
THA.LOC104804858 Tarenaya hassleriana HOM05D006106 ORTHO05D007662 6.3e-10 70.9 48 68.8
Os07g0213300 Oryza sativa ssp. japonica HOM05D006106 ORTHO05D007662 1.4e-09 69.7 47 70.2
unitig_578.g15981 Utricularia gibba HOM05D006106 ORTHO05D007662 1.8e-09 69.3 106 34.9
Rhsim03G0026800 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.6e-08 66.2 66 48.5
Rhsim03G0026000 Rhododendron simsii HOM05D001739 ORTHO05D007662 3.5e-08 65.1 66 50.0
Solyc04g015950.3 Solanum lycopersicum HOM05D006106 ORTHO05D007662 3.5e-08 65.1 119 28.6
Nitab4.5_0009615g0040 Nicotiana tabacum HOM05D006106 ORTHO05D007662 1.7e-07 62.8 119 26.1
Lj7P707T11 Lonicera japonica HOM05D008234 ORTHO05D010422 2.9e-07 62.0 164 25.6
Nitab4.5_0003070g0020 Nicotiana tabacum HOM05D007340 ORTHO05D008979 6.5e-07 60.8 158 25.9
Rhsim03G0025500 Rhododendron simsii HOM05D006106 ORTHO05D007662 6.5e-07 60.8 83 42.2
Psat4g028320 Pisum sativum HOM05D000001 ORTHO05D009891 8.5e-07 60.5 111 29.7
BcaC02g12786 Brassica carinata HOM05D000138 ORTHO05D007692 3.2e-06 58.5 98 28.6
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 3.2e-06 58.5 158 25.3
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 3.2e-06 58.5 103 29.1
BcaNung06942 Brassica carinata HOM05D006106 ORTHO05D007662 5.5e-06 57.8 94 33.0


User provided reference genes

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