Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0039s0051 Marchantia polymorpha HOM05D003157 ORTHO05D004447 0.0e+00 1303.1 720 100.0
Mapoly0100s0042 Marchantia polymorpha HOM05D003157 ORTHO05D004447 3.1e-83 313.9 836 37.7
Pp3c11_16970 Physcomitrium patens HOM05D003157 ORTHO05D004447 2.6e-77 294.3 724 33.0
Pp3c7_8990 Physcomitrium patens HOM05D003157 ORTHO05D004447 3.3e-64 250.8 797 30.7
SEGI_11452 Sequoiadendron giganteum HOM05D003157 ORTHO05D004447 2.3e-62 244.6 746 30.3
AagrBONN_evm.TU.Sc2ySwM_228.5109 Anthoceros agrestis HOM05D003157 ORTHO05D004447 4.0e-62 243.8 804 30.6
unitig_37.g12746 Utricularia gibba HOM05D003157 ORTHO05D004447 1.1e-48 199.1 784 27.0
HPP92_024706 Vanilla planifolia HOM05D003157 ORTHO05D004447 3.3e-48 197.6 747 25.3
arahy.Tifrunner.gnm1.ann1.RZMV9E Arachis hypogaea HOM05D003157 ORTHO05D004447 1.1e-46 192.6 475 32.0
CDE02G1794 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 4.9e-44 183.7 738 26.8
arahy.Tifrunner.gnm1.ann1.UDW2C6 Arachis hypogaea HOM05D003157 ORTHO05D004447 8.4e-44 183.0 475 31.2
Lsat_1_v5_gn_4_77240 Lactuca sativa HOM05D003157 ORTHO05D004447 3.2e-43 181.0 477 29.8
Carub.0007s1637 Capsella rubella HOM05D003157 ORTHO05D004447 5.4e-43 180.3 730 26.0
CDE04G2303 Ceratophyllum demersum HOM05D003157 ORTHO05D004447 1.2e-42 179.1 753 25.5
Actinidia08960 Actinidia chinensis HOM05D003157 ORTHO05D004447 2.7e-42 177.9 485 31.1
Nn3g16701 Nelumbo nucifera HOM05D003157 ORTHO05D004447 3.5e-42 177.6 468 31.0
CBR_g19475 Chara braunii HOM05D003157 ORTHO05D004447 1.0e-41 176.0 405 32.1
Glyma.17G084700 Glycine max HOM05D003157 ORTHO05D004447 2.3e-41 174.9 458 29.5
Peaxi162Scf00089g01334 Petunia axillaris HOM05D003157 ORTHO05D004447 2.3e-41 174.9 461 29.7
Sp7g22680 Schrenkiella parvula HOM05D003157 ORTHO05D004447 2.3e-41 174.9 749 25.6
BolC8t48585H Brassica oleracea HOM05D003157 ORTHO05D004447 6.6e-41 173.3 735 26.3
QL10p006899 Quercus lobata HOM05D003157 ORTHO05D004447 6.6e-41 173.3 481 30.4
PGSC0003DMG400027073 Solanum tuberosum HOM05D003157 ORTHO05D004447 6.6e-41 173.3 799 26.2
AT4G24690 Arabidopsis thaliana HOM05D003157 ORTHO05D004447 8.7e-41 172.9 746 25.2
Migut.D01995 Erythranthe guttata HOM05D003157 ORTHO05D004447 8.7e-41 172.9 654 27.7
Rhsim12G0167900 Rhododendron simsii HOM05D003157 ORTHO05D004447 1.1e-40 172.6 478 31.2
Manes.14G060700 Manihot esculenta HOM05D003157 ORTHO05D004447 1.9e-40 171.8 477 30.2
Prupe.5G165800 Prunus persica HOM05D003157 ORTHO05D004447 2.5e-40 171.4 463 30.0
vmacro19300 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 3.3e-40 171.0 455 29.5
Sabra12G0061600 Salix brachista HOM05D003157 ORTHO05D004447 4.3e-40 170.6 804 26.4
CSS0041144 Camellia sinensis var. sinensis HOM05D003157 ORTHO05D004447 5.6e-40 170.2 482 29.9
CAN.G338.32 Capsicum annuum HOM05D003157 ORTHO05D004447 5.6e-40 170.2 454 31.5
Sopen03g031330 Solanum pennellii HOM05D003157 ORTHO05D004447 5.6e-40 170.2 470 30.2
EL10Ac5g10658 Beta vulgaris HOM05D003157 ORTHO05D004447 7.3e-40 169.9 473 29.6
Cfa019214 Carpinus fangiana HOM05D003157 ORTHO05D004447 9.6e-40 169.5 497 28.6
Dinv20600 Davidia involucrata HOM05D003157 ORTHO05D004447 9.6e-40 169.5 485 28.9
AL7G28510 Arabidopsis lyrata HOM05D003157 ORTHO05D004447 1.6e-39 168.7 753 24.4
vmacro16645 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 2.1e-39 168.3 471 31.4
BraA01t01537Z Brassica rapa HOM05D003157 ORTHO05D004447 2.8e-39 167.9 746 25.6
HPP92_006279 Vanilla planifolia HOM05D003157 ORTHO05D004447 6.2e-39 166.8 690 25.7
Zm00001eb245950 Zea mays HOM05D003157 ORTHO05D004447 6.2e-39 166.8 799 25.5
Peaxi162Scf00763g00430 Petunia axillaris HOM05D003157 ORTHO05D004447 8.1e-39 166.4 463 30.7
Phvul.003G205000 Phaseolus vulgaris HOM05D003157 ORTHO05D004447 8.1e-39 166.4 470 31.1
PGSC0003DMG400018122 Solanum tuberosum HOM05D003157 ORTHO05D004447 8.1e-39 166.4 466 29.6
A08p21390 Brassica napus HOM05D003157 ORTHO05D004447 1.1e-38 166.0 720 25.3
Nitab4.5_0001793g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 1.1e-38 166.0 462 29.0
Haze_07584 Corylus avellana HOM05D003157 ORTHO05D004447 1.4e-38 165.6 458 30.1
Nitab4.5_0010452g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 1.8e-38 165.2 467 29.3
Os02g0593700 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 1.8e-38 165.2 559 26.8
Solyc03g112230.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 1.8e-38 165.2 456 30.0
BcaC07g38161 Brassica carinata HOM05D003157 ORTHO05D004447 2.4e-38 164.9 745 26.3
CARHR232070 Cardamine hirsuta HOM05D003157 ORTHO05D004447 2.4e-38 164.9 746 24.8
Oeu020884.3 Olea europaea HOM05D003157 ORTHO05D004447 3.1e-38 164.5 470 28.7
TAR371G0612 Trochodendron aralioides HOM05D003157 ORTHO05D004447 4.0e-38 164.1 491 28.1
Ciclev10024152m.g Citrus clementina HOM05D003157 ORTHO05D004447 5.3e-38 163.7 482 28.8
Lj4g0014353 Lotus japonicus HOM05D003157 ORTHO05D004447 6.9e-38 163.3 477 28.5
Sabra15G0107200 Salix brachista HOM05D003157 ORTHO05D004447 6.9e-38 163.3 459 29.2
BraA08t34089Z Brassica rapa HOM05D003157 ORTHO05D004447 9.0e-38 162.9 715 25.9
Ca_14277_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 9.0e-38 162.9 473 28.8
Nitab4.5_0008713g0020 Nicotiana tabacum HOM05D003157 ORTHO05D004447 9.0e-38 162.9 463 29.8
FvH4_5g06270 Fragaria vesca HOM05D003157 ORTHO05D004447 1.2e-37 162.5 467 30.2
Eucgr.K02800 Eucalyptus grandis HOM05D003157 ORTHO05D004447 1.5e-37 162.2 457 29.3
AUR62008147 Chenopodium quinoa HOM05D003157 ORTHO05D004447 2.0e-37 161.8 469 28.6
THA.LOC104809775 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 2.0e-37 161.8 770 25.3
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 2.6e-37 161.4 725 25.1
Rhsim08G0177500 Rhododendron simsii HOM05D003157 ORTHO05D004447 2.6e-37 161.4 455 28.6
VMungo1215G0567 Vigna mungo HOM05D003157 ORTHO05D004447 2.6e-37 161.4 464 28.0
Cc04_g11550 Coffea canephora HOM05D003157 ORTHO05D004447 3.4e-37 161.0 472 28.4
Solyc06g071770.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 3.4e-37 161.0 800 25.0
HanXRQChr10g0296081 Helianthus annuus HOM05D003157 ORTHO05D004447 4.5e-37 160.6 502 29.1
MD06G1165900 Malus domestica HOM05D003157 ORTHO05D004447 4.5e-37 160.6 468 29.3
BraA03t14620Z Brassica rapa HOM05D003157 ORTHO05D004447 5.8e-37 160.2 738 24.0
TPR.G37494 Trifolium pratense HOM05D003157 ORTHO05D004447 5.8e-37 160.2 530 27.5
Lj5A130T68 Lonicera japonica HOM05D003157 ORTHO05D004447 7.6e-37 159.8 469 28.8
MD14G1171800 Malus domestica HOM05D003157 ORTHO05D004447 7.6e-37 159.8 472 28.2
Glyma.05G041600 Glycine max HOM05D003157 ORTHO05D004447 9.9e-37 159.5 451 29.5
Sed0005003 Sechium edule HOM05D003157 ORTHO05D004447 9.9e-37 159.5 461 29.7
THA.LOC104825177 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 1.7e-36 158.7 458 28.8
Manes.06G110100 Manihot esculenta HOM05D003157 ORTHO05D004447 2.2e-36 158.3 799 25.0
SalBow6G1229 Salvia bowleyana HOM05D003157 ORTHO05D004447 2.2e-36 158.3 498 27.7
A03p55470 Brassica napus HOM05D003157 ORTHO05D004447 2.9e-36 157.9 739 26.4
Sopen06g028060 Solanum pennellii HOM05D003157 ORTHO05D004447 2.9e-36 157.9 454 29.5
DCAR_016024 Daucus carota HOM05D003157 ORTHO05D004447 3.8e-36 157.5 459 28.5
ECA232G3241 Erigeron canadensis HOM05D003157 ORTHO05D004447 3.8e-36 157.5 513 27.9
Aa31LG4G9790 Aethionema arabicum HOM05D003157 ORTHO05D004447 4.9e-36 157.1 750 25.1
FAN18G2672 Fragaria x ananassa HOM05D003157 ORTHO05D004447 4.9e-36 157.1 461 29.5
BolC1t01929H Brassica oleracea HOM05D003157 ORTHO05D004447 6.4e-36 156.8 771 24.5
Gohir.A03G056900 Gossypium hirsutum HOM05D003157 ORTHO05D004447 6.4e-36 156.8 468 26.7
Potri.015G084000 Populus trichocarpa HOM05D003157 ORTHO05D004447 8.4e-36 156.4 458 28.6
FAN13G0746 Fragaria x ananassa HOM05D003157 ORTHO05D004447 1.1e-35 156.0 462 29.7
Sc12g0005010 Simmondsia chinensis HOM05D003157 ORTHO05D004447 1.1e-35 156.0 478 28.9
BcaC06g32868 Brassica carinata HOM05D003157 ORTHO05D004447 1.4e-35 155.6 457 28.7
Nitab4.5_0000003g0820 Nicotiana tabacum HOM05D003157 ORTHO05D004447 1.4e-35 155.6 465 28.8
PSO111G0086 Papaver somniferum HOM05D003157 ORTHO05D004447 1.4e-35 155.6 793 25.5
Lj9A442T64 Lonicera japonica HOM05D003157 ORTHO05D004447 1.9e-35 155.2 461 27.5
BcaC09g50840 Brassica carinata HOM05D003157 ORTHO05D004447 2.4e-35 154.8 752 24.5
FAN08G1011 Fragaria x ananassa HOM05D003157 ORTHO05D004447 2.4e-35 154.8 462 29.4
ClCG01G013500 Citrullus lanatus HOM05D003157 ORTHO05D004447 3.2e-35 154.5 465 28.6
Lalb_Chr07g0182971 Lupinus albus HOM05D003157 ORTHO05D004447 4.2e-35 154.1 457 26.3
CANSAT80G2678 Cannabis sativa HOM05D003157 ORTHO05D004447 5.4e-35 153.7 528 27.3
Ah.11g051160 Amaranthus hybridus HOM05D003157 ORTHO05D004447 7.1e-35 153.3 485 28.7
A01p16030 Brassica napus HOM05D003157 ORTHO05D004447 7.1e-35 153.3 749 24.7
ClCG03G002990 Citrullus lanatus HOM05D003157 ORTHO05D004447 9.3e-35 152.9 461 28.4
Thhalv10024557m.g Eutrema salsugineum HOM05D003157 ORTHO05D004447 9.3e-35 152.9 544 25.7
ATR0824G119 Amborella trichopoda HOM05D003157 ORTHO05D004447 1.2e-34 152.5 814 25.2
C01p20020 Brassica napus HOM05D003157 ORTHO05D004447 1.2e-34 152.5 758 24.5
MSTRG.9691 Avicennia marina HOM05D003157 ORTHO05D004447 2.1e-34 151.8 464 28.4
CAN.G993.20 Capsicum annuum HOM05D003157 ORTHO05D004447 2.1e-34 151.8 455 28.8
BolC7t45866H Brassica oleracea HOM05D003157 ORTHO05D004447 3.5e-34 151.0 740 24.1
FAN04G1965 Fragaria x ananassa HOM05D003157 ORTHO05D004447 3.5e-34 151.0 462 29.2
PGR044G1972 Punica granatum HOM05D003157 ORTHO05D004447 3.5e-34 151.0 753 25.5
PSO754G0123 Papaver somniferum HOM05D003157 ORTHO05D004447 4.6e-34 150.6 790 24.6
Psat4g060880 Pisum sativum HOM05D003157 ORTHO05D004447 4.6e-34 150.6 494 26.3
MELO3C002297.2 Cucumis melo HOM05D003157 ORTHO05D004447 6.0e-34 150.2 475 29.1
DCAR_021588 Daucus carota HOM05D003157 ORTHO05D004447 6.0e-34 150.2 448 28.6
Dinv38527 Davidia involucrata HOM05D003157 ORTHO05D004447 6.0e-34 150.2 465 28.4
Gorai.003G115800 Gossypium raimondii HOM05D003157 ORTHO05D004447 6.0e-34 150.2 470 26.4
Gorai.007G046900 Gossypium raimondii HOM05D003157 ORTHO05D004447 7.9e-34 149.8 460 27.4
TWI14G1342 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 7.9e-34 149.8 466 28.5
Gohir.A11G040300 Gossypium hirsutum HOM05D003157 ORTHO05D004447 1.3e-33 149.1 458 26.4
HanXRQChr16g0504701 Helianthus annuus HOM05D003157 ORTHO05D004447 1.3e-33 149.1 486 27.6
C07p53750 Brassica napus HOM05D003157 ORTHO05D004447 3.0e-33 147.9 459 27.2
Gohir.D03G106700 Gossypium hirsutum HOM05D003157 ORTHO05D004447 3.0e-33 147.9 471 27.4
Aqoxy3G01217 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 6.7e-33 146.7 807 24.0
RcHm_v2.0_Chr7g0192591 Rosa chinensis HOM05D003157 ORTHO05D004447 6.7e-33 146.7 470 27.4
MSTRG.11494 Avicennia marina HOM05D003157 ORTHO05D004447 8.7e-33 146.4 476 27.9
Medtr4g104880 Medicago truncatula HOM05D003157 ORTHO05D004447 1.1e-32 146.0 527 26.4
Lalb_Chr13g0297581 Lupinus albus HOM05D003157 ORTHO05D004447 1.5e-32 145.6 510 25.9
GSVIVG01007647001 Vitis vinifera HOM05D003157 ORTHO05D004447 1.5e-32 145.6 459 28.5
CsaV3_1G008830 Cucumis sativus L. HOM05D003157 ORTHO05D004447 1.9e-32 145.2 475 27.4
Potri.012G085700 Populus trichocarpa HOM05D003157 ORTHO05D004447 3.3e-32 144.4 460 27.6
CiPaw.11G019800 Carya illinoinensis HOM05D003157 ORTHO05D004447 5.6e-32 143.7 457 27.1
COL.COLO4_36761 Corchorus olitorius HOM05D003157 ORTHO05D004447 1.6e-31 142.1 549 26.4
Hund02785 Selenicereus undatus HOM05D003157 ORTHO05D004447 2.1e-31 141.7 255 31.8
Gohir.D11G043500 Gossypium hirsutum HOM05D003157 ORTHO05D004447 4.8e-31 140.6 748 25.5
DCAR_026172 Daucus carota HOM05D003157 ORTHO05D004447 6.2e-31 140.2 458 29.5
SHI17273 Sapria himalayana HOM05D003157 ORTHO05D004447 8.1e-31 139.8 270 32.6
TAR629G0508 Trochodendron aralioides HOM05D003157 ORTHO05D004447 8.1e-31 139.8 488 27.0
Sed0026079 Sechium edule HOM05D003157 ORTHO05D004447 1.4e-30 139.0 470 28.7
SMO132G0003 Selaginella moellendorffii HOM05D003157 ORTHO05D004447 1.8e-30 138.7 302 33.1
Mapoly0039s0049 Marchantia polymorpha HOM05D003157 ORTHO05D011370 9.0e-30 136.3 277 33.9
SGA_v2.0_scaffold7G04161 Striga asiatica HOM05D003157 ORTHO05D004447 9.0e-30 136.3 337 29.1
Atru.chr9.2575 Acer truncatum HOM05D003157 ORTHO05D004447 2.0e-29 135.2 259 33.2
AUR62028729 Chenopodium quinoa HOM05D003157 ORTHO05D004447 4.5e-29 134.0 771 25.3
Mapoly0039s0050 Marchantia polymorpha HOM05D003157 ORTHO05D004447 1.0e-28 132.9 273 35.2
Lalb_Chr12g0201891 Lupinus albus HOM05D003157 ORTHO05D004447 2.9e-28 131.3 557 23.5
Thecc.03G025700 Theobroma cacao HOM05D003157 ORTHO05D004447 2.9e-28 131.3 560 27.1
Potri.012G085450 Populus trichocarpa HOM05D003157 ORTHO05D004447 6.5e-28 130.2 274 31.0
Os04g0476800 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 1.9e-27 128.6 491 25.5
TWI23G0818 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 4.2e-27 127.5 489 27.4
SGA_v2.0_scaffold114G31812 Striga asiatica HOM05D003157 ORTHO05D004447 2.1e-26 125.2 488 27.3
Oeu040857.2 Olea europaea HOM05D003157 ORTHO05D004447 8.7e-25 119.8 453 27.2
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 2.1e-23 115.2 111 45.9
Cpa.g.sc159.27 Carica papaya HOM05D003157 ORTHO05D004447 1.1e-19 102.8 179 31.3
Actinidia24597 Actinidia chinensis HOM05D003157 ORTHO05D004447 4.2e-19 100.9 524 24.0
Actinidia08033 Actinidia chinensis HOM05D000048 ORTHO05D004447 9.3e-19 99.8 538 24.3
Oeu023452.2 Olea europaea HOM05D003157 ORTHO05D004447 1.2e-18 99.4 458 26.2
Aqoxy3G02978 Aquilegia oxysepala HOM05D003157 ORTHO05D004447 4.6e-18 97.4 113 38.9
COL.COLO4_24272 Corchorus olitorius HOM05D003157 ORTHO05D004447 1.8e-17 95.5 607 22.6
SGA_v2.0_scaffold25G10800 Striga asiatica HOM05D003157 ORTHO05D004447 1.5e-16 92.4 200 32.5
Migut.O00156 Erythranthe guttata HOM05D003157 ORTHO05D004447 7.4e-16 90.1 111 38.7
Cfa025644 Carpinus fangiana HOM05D003157 ORTHO05D123324 2.4e-14 85.1 306 26.1
Migut.O00157 Erythranthe guttata HOM05D003157 ORTHO05D004447 2.6e-13 81.6 127 33.9
Migut.K00603 Erythranthe guttata HOM05D003157 ORTHO05D004447 1.7e-12 79.0 118 36.4
Dinv15230 Davidia involucrata HOM05D003157 ORTHO05D004447 1.8e-09 68.9 454 22.0
Mapoly0178s0003 Marchantia polymorpha HOM05D008964 ORTHO05D254275 1.1e-08 66.2 95 41.1
SEGI_31497 Sequoiadendron giganteum HOM05D003157 ORTHO05D012168 5.7e-08 63.9 111 39.6
Prupe.5G165900 Prunus persica HOM05D003157 ORTHO05D012168 1.1e-06 59.7 259 26.6
AagrBONN_evm.TU.Sc2ySwM_368.1925 Anthoceros agrestis HOM05D008964 ORTHO05D011370 2.4e-06 58.5 58 48.3


User provided reference genes

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