Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0200 Marchantia polymorpha HOM05D006835 ORTHO05D008587 1.4e-76 290.8 341 100.0
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 6.2e-13 79.3 90 43.3
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 8.1e-13 79.0 90 43.3
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 1.4e-12 78.2 73 56.2
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 6.8e-12 75.9 85 43.5
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 6.8e-12 75.9 90 45.6
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 6.8e-12 75.9 90 42.2
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 8.9e-12 75.5 84 44.0
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 1.5e-11 74.7 93 44.1
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 1.5e-11 74.7 99 42.4
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 2.0e-11 74.3 94 41.5
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 4.4e-11 73.2 91 41.8
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 4.4e-11 73.2 91 41.8
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 4.4e-11 73.2 89 40.4
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 4.4e-11 73.2 86 44.2
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 7.6e-11 72.4 94 43.6
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 7.6e-11 72.4 93 43.0
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 7.6e-11 72.4 90 43.3
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 7.6e-11 72.4 90 43.3
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 7.6e-11 72.4 90 44.4
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 9.9e-11 72.0 100 40.0
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 9.9e-11 72.0 83 42.2
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 9.9e-11 72.0 82 41.5
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 9.9e-11 72.0 90 42.2
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 9.9e-11 72.0 90 42.2
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 1.3e-10 71.6 91 41.8
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.3e-10 71.6 84 45.2
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 1.3e-10 71.6 93 43.0
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 1.7e-10 71.2 84 42.9
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 1.7e-10 71.2 97 41.2
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 2.2e-10 70.9 85 42.4
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 2.2e-10 70.9 85 42.4
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 2.2e-10 70.9 85 41.2
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 2.9e-10 70.5 100 40.0
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 2.9e-10 70.5 87 42.5
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 2.9e-10 70.5 87 42.5
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 2.9e-10 70.5 87 40.2
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 2.9e-10 70.5 90 40.0
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 2.9e-10 70.5 89 44.9
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 3.8e-10 70.1 90 36.7
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 3.8e-10 70.1 90 37.8
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 4.9e-10 69.7 83 42.2
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 4.9e-10 69.7 90 42.2
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 4.9e-10 69.7 90 38.9
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 6.4e-10 69.3 91 40.7
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 6.4e-10 69.3 98 39.8
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 6.4e-10 69.3 75 45.3
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 8.4e-10 68.9 90 40.0
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 8.4e-10 68.9 90 38.9
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 8.4e-10 68.9 93 41.9
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 8.4e-10 68.9 97 38.1
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 8.4e-10 68.9 85 40.0
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.1e-09 68.6 86 40.7
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 1.1e-09 68.6 86 40.7
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 1.1e-09 68.6 93 41.9
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 1.1e-09 68.6 89 39.3
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 1.1e-09 68.6 88 39.8
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 1.4e-09 68.2 83 43.4
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.4e-09 68.2 86 40.7
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 1.9e-09 67.8 93 39.8
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 1.9e-09 67.8 93 38.7
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 1.9e-09 67.8 90 40.0
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 1.9e-09 67.8 75 45.3
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 3.2e-09 67.0 87 41.4
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 3.2e-09 67.0 93 39.8
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 3.2e-09 67.0 93 39.8
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 4.1e-09 66.6 89 41.6
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 4.1e-09 66.6 91 39.6
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 5.4e-09 66.2 100 36.0
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 9.2e-09 65.5 68 48.5
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 1.2e-08 65.1 75 44.0
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 1.2e-08 65.1 84 40.5
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 1.2e-08 65.1 83 41.0
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 1.6e-08 64.7 80 38.8
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 1.6e-08 64.7 87 35.6
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 2.7e-08 63.9 90 35.6
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 2.7e-08 63.9 90 35.6
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 2.7e-08 63.9 96 33.3
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 2.7e-08 63.9 89 39.3
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 3.5e-08 63.5 100 38.0
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 3.5e-08 63.5 88 37.5
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 3.5e-08 63.5 80 36.2
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 4.6e-08 63.2 76 42.1
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 4.6e-08 63.2 93 36.6
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 7.8e-08 62.4 88 34.1
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.0e-07 62.0 80 40.0
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 1.0e-07 62.0 86 33.7
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 1.7e-07 61.2 84 36.9
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 2.3e-07 60.8 61 47.5
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 3.0e-07 60.5 91 37.4
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 3.0e-07 60.5 83 37.3
SMO353G0202 Selaginella moellendorffii HOM05D006835 ORTHO05D001299 3.9e-07 60.1 92 37.0
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 5.1e-07 59.7 72 44.4
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 5.1e-07 59.7 86 36.0
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 6.6e-07 59.3 84 34.5
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 1.5e-06 58.2 72 36.1
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 3.3e-06 57.0 100 33.0
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 3.3e-06 57.0 95 30.5
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 4.3e-06 56.6 96 34.4
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 4.3e-06 56.6 78 38.5
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 4.3e-06 56.6 68 39.7
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 7.3e-06 55.8 68 41.2


User provided reference genes

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