Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0014s0066 Marchantia polymorpha HOM05D004619 ORTHO05D005738 0.0e+00 1457.2 728 100.0
Pp3c16_3750 Physcomitrium patens HOM05D004619 ORTHO05D005738 1.6e-215 753.4 723 53.7
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis HOM05D004619 ORTHO05D005738 6.7e-190 668.3 612 54.7
MD15G1093200 Malus domestica HOM05D004619 ORTHO05D005738 5.8e-178 628.6 702 45.9
MBI01_g18389_MAGBIO Magnolia biondii HOM05D004619 ORTHO05D005738 2.2e-177 626.7 705 47.0
ATR0705G091 Amborella trichopoda HOM05D004619 ORTHO05D005738 1.2e-175 620.9 702 46.7
QL12p041325 Quercus lobata HOM05D004619 ORTHO05D005738 1.3e-174 617.5 702 46.2
Cfa013367 Carpinus fangiana HOM05D004619 ORTHO05D005738 3.9e-174 615.9 699 45.4
FvH4_2g35520 Fragaria vesca HOM05D004619 ORTHO05D005738 2.5e-173 613.2 699 44.5
Prupe.1G448000 Prunus persica HOM05D004619 ORTHO05D005738 2.5e-173 613.2 703 44.4
FAN27G0819 Fragaria x ananassa HOM05D004619 ORTHO05D005738 4.3e-173 612.5 699 44.5
GSVIVG01035621001 Vitis vinifera HOM05D004619 ORTHO05D005738 4.3e-173 612.5 703 45.2
CDE02G4285 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 2.4e-171 606.7 698 45.7
Nn8g39783 Nelumbo nucifera HOM05D004619 ORTHO05D005738 6.9e-171 605.1 708 44.6
Lj8A581G22 Lonicera japonica HOM05D004619 ORTHO05D005738 1.2e-170 604.4 706 44.8
Eucgr.C00596 Eucalyptus grandis HOM05D004619 ORTHO05D005738 1.5e-170 604.0 700 44.6
Aqoxy7G03899 Aquilegia oxysepala HOM05D004619 ORTHO05D005738 4.5e-170 602.4 706 45.0
CSS0016966 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 1.0e-169 601.3 701 44.5
RcHm_v2.0_Chr6g0306261 Rosa chinensis HOM05D004619 ORTHO05D005738 1.3e-169 600.9 706 43.9
Zm00001eb152980 Zea mays HOM05D004619 ORTHO05D005738 1.7e-169 600.5 709 44.6
Ciclev10007610m.g Citrus clementina HOM05D004619 ORTHO05D005738 3.8e-169 599.4 700 44.7
CSS0048446 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 6.5e-169 598.6 701 44.5
CANSAT25G1337 Cannabis sativa HOM05D004619 ORTHO05D005738 1.1e-168 597.8 702 44.9
Duzib168G0872 Durio zibethinus HOM05D004619 ORTHO05D005738 1.4e-168 597.4 702 43.6
Atru.chr7.2086 Acer truncatum HOM05D004619 ORTHO05D005738 2.5e-168 596.7 703 43.5
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 2.5e-168 596.7 705 44.0
Nitab4.5_0001515g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 1.2e-167 594.3 701 43.4
Os01g0746200 Oryza sativa ssp. japonica HOM05D004619 ORTHO05D005738 2.1e-167 593.6 713 44.5
FAN20G0141 Fragaria x ananassa HOM05D004619 ORTHO05D005738 4.6e-167 592.4 710 43.1
COL.COLO4_20972 Corchorus olitorius HOM05D004619 ORTHO05D005738 6.1e-167 592.0 701 44.5
Nitab4.5_0003794g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 3.0e-166 589.7 703 43.2
Gorai.010G106300 Gossypium raimondii HOM05D004619 ORTHO05D005738 3.9e-166 589.3 702 43.9
Gohir.D06G092300 Gossypium hirsutum HOM05D004619 ORTHO05D005738 6.7e-166 588.6 702 43.7
EL10Ac2g04016 Beta vulgaris HOM05D004619 ORTHO05D005738 8.7e-166 588.2 707 45.0
Lalb_Chr14g0362511 Lupinus albus HOM05D004619 ORTHO05D005738 8.7e-166 588.2 700 43.9
Solyc08g066580.4 Solanum lycopersicum HOM05D004619 ORTHO05D005738 7.4e-165 585.1 703 43.2
Sopen08g020420 Solanum pennellii HOM05D004619 ORTHO05D005738 8.2e-164 581.6 703 43.0
Sc23g0005210 Simmondsia chinensis HOM05D004619 ORTHO05D005738 1.1e-163 581.3 708 44.5
CARHR240910 Cardamine hirsuta HOM05D004619 ORTHO05D005738 1.8e-163 580.5 702 44.3
CiPaw.07G204000 Carya illinoinensis HOM05D004619 ORTHO05D005738 2.4e-163 580.1 639 46.8
BraA01t00511Z Brassica rapa HOM05D004619 ORTHO05D005738 4.1e-163 579.3 704 44.7
DCAR_004468 Daucus carota HOM05D004619 ORTHO05D005738 5.3e-163 578.9 704 43.9
Thhalv10024536m.g Eutrema salsugineum HOM05D004619 ORTHO05D005738 5.3e-163 578.9 702 44.2
A01p05370 Brassica napus HOM05D004619 ORTHO05D005738 6.9e-163 578.6 704 44.6
Peaxi162Scf00227g00812 Petunia axillaris HOM05D004619 ORTHO05D005738 9.1e-163 578.2 697 43.0
Thecc.09G045500 Theobroma cacao HOM05D004619 ORTHO05D005738 9.1e-163 578.2 702 43.2
Ca_12754_v3 Cicer arietinum L. HOM05D004619 ORTHO05D005738 1.2e-162 577.8 697 44.0
Sed0007447 Sechium edule HOM05D004619 ORTHO05D005738 1.2e-162 577.8 707 42.9
C01p05790 Brassica napus HOM05D004619 ORTHO05D005738 1.5e-162 577.4 704 44.5
HanXRQChr13g0402061 Helianthus annuus HOM05D004619 ORTHO05D005738 1.5e-162 577.4 708 44.4
BcaC09g52091 Brassica carinata HOM05D004619 ORTHO05D005738 2.0e-162 577.0 704 44.5
BolC1t00559H Brassica oleracea HOM05D004619 ORTHO05D005738 2.0e-162 577.0 704 44.5
Medtr1g006690 Medicago truncatula HOM05D004619 ORTHO05D005738 2.0e-162 577.0 732 42.2
PSO210G5473 Papaver somniferum HOM05D004619 ORTHO05D005738 2.0e-162 577.0 697 42.9
ECA233G0099 Erigeron canadensis HOM05D004619 ORTHO05D005738 7.7e-162 575.1 714 44.1
PSO210G6185 Papaver somniferum HOM05D004619 ORTHO05D005738 1.3e-161 574.3 700 42.9
Sp7g30680 Schrenkiella parvula HOM05D004619 ORTHO05D005738 1.3e-161 574.3 703 43.8
Gohir.A06G092700 Gossypium hirsutum HOM05D004619 ORTHO05D005738 1.7e-161 573.9 702 43.2
Migut.E01528 Erythranthe guttata HOM05D004619 ORTHO05D005738 3.8e-161 572.8 687 43.5
Lsat_1_v5_gn_6_23120 Lactuca sativa HOM05D004619 ORTHO05D005738 2.5e-160 570.1 706 43.6
Carub.0007s0758 Capsella rubella HOM05D004619 ORTHO05D005738 4.2e-160 569.3 700 43.9
Glyma.17G193800 Glycine max HOM05D004619 ORTHO05D005738 4.2e-160 569.3 694 43.9
AT4G32910 Arabidopsis thaliana HOM05D004619 ORTHO05D005738 1.2e-159 567.8 702 43.6
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea HOM05D004619 ORTHO05D005738 2.1e-159 567.0 701 43.7
TPR.G24498 Trifolium pratense HOM05D004619 ORTHO05D005738 2.1e-159 567.0 701 42.7
AL7G18800 Arabidopsis lyrata HOM05D004619 ORTHO05D005738 4.6e-159 565.8 702 43.4
CsaV3_2G030840 Cucumis sativus L. HOM05D004619 ORTHO05D005738 4.6e-159 565.8 705 42.1
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea HOM05D004619 ORTHO05D005738 1.0e-158 564.7 701 43.7
Cc08_g09590 Coffea canephora HOM05D004619 ORTHO05D005738 3.0e-158 563.1 706 41.6
Sabra18G0044200 Salix brachista HOM05D004619 ORTHO05D005738 3.0e-158 563.1 600 46.8
CAN.G400.8 Capsicum annuum HOM05D004619 ORTHO05D005738 3.9e-158 562.8 660 43.6
Lj1g0001172 Lotus japonicus HOM05D004619 ORTHO05D005738 6.7e-158 562.0 736 42.4
Sabra18G0044100 Salix brachista HOM05D004619 ORTHO05D005738 1.1e-157 561.2 604 46.5
Ah.10g035010 Amaranthus hybridus HOM05D004619 ORTHO05D005738 4.4e-157 559.3 699 43.5
THA.LOC104803757 Tarenaya hassleriana HOM05D004619 ORTHO05D005738 5.7e-157 558.9 703 43.1
TAR636G2525 Trochodendron aralioides HOM05D004619 ORTHO05D005738 2.8e-156 556.6 646 45.2
ClCG08G012210 Citrullus lanatus HOM05D004619 ORTHO05D005738 2.4e-155 553.5 705 41.7
AUR62039705 Chenopodium quinoa HOM05D004619 ORTHO05D005738 3.1e-155 553.1 599 46.6
HPP92_005572 Vanilla planifolia HOM05D004619 ORTHO05D005738 4.1e-155 552.7 708 42.7
SGA_v2.0_scaffold169G38654 Striga asiatica HOM05D004619 ORTHO05D005738 1.2e-154 551.2 683 42.2
Aa31sc131G40 Aethionema arabicum HOM05D004619 ORTHO05D005738 4.5e-154 549.3 714 43.0
MSTRG.1660 Avicennia marina HOM05D004619 ORTHO05D005738 4.5e-154 549.3 689 42.1
Manes.16G075300 Manihot esculenta HOM05D004619 ORTHO05D005738 7.7e-154 548.5 703 42.8
Rhsim07G0146900 Rhododendron simsii HOM05D004619 ORTHO05D005738 2.9e-153 546.6 668 42.7
Haze_21890 Corylus avellana HOM05D004619 ORTHO05D005738 8.5e-153 545.0 705 42.7
Dinv27905 Davidia involucrata HOM05D004619 ORTHO05D005738 4.4e-149 532.7 552 46.9
Eucgr.C00551 Eucalyptus grandis HOM05D004619 ORTHO05D005738 2.8e-148 530.0 617 44.4
MELO3C011139.2 Cucumis melo HOM05D004619 ORTHO05D005738 1.2e-146 524.6 713 41.0
SalBow1G6937 Salvia bowleyana HOM05D004619 ORTHO05D005738 1.2e-146 524.6 693 40.4
Actinidia15739 Actinidia chinensis HOM05D004619 ORTHO05D005738 8.5e-145 518.5 648 42.9
PGR031G0242 Punica granatum HOM05D004619 ORTHO05D005738 2.5e-144 516.9 698 40.3
Phvul.001G074000 Phaseolus vulgaris HOM05D004619 ORTHO05D005738 7.2e-144 515.4 633 43.3
AUR62009276 Chenopodium quinoa HOM05D004619 ORTHO05D005738 3.6e-135 486.5 701 40.7
Hund19512 Selenicereus undatus HOM05D004619 ORTHO05D005738 2.3e-134 483.8 852 34.9
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 3.0e-134 483.4 545 44.8
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 3.1e-131 473.4 572 42.8
vmacro05371 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 1.3e-124 451.4 966 31.3
Potri.018G044300 Populus trichocarpa HOM05D004619 ORTHO05D005738 7.3e-120 435.6 460 48.0
SHI18685 Sapria himalayana HOM05D004619 ORTHO05D005738 4.7e-119 433.0 700 37.9
Oeu031693.1 Olea europaea HOM05D004619 ORTHO05D005738 4.6e-106 389.8 444 43.9
vmacro23276 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 2.3e-102 377.5 960 29.9
VMungo0647G0418 Vigna mungo HOM05D004619 ORTHO05D005738 3.9e-89 333.6 381 44.6
BcaC09g52090 Brassica carinata HOM05D004619 ORTHO05D005738 1.5e-72 278.5 351 42.7
Actinidia14677 Actinidia chinensis HOM05D004619 ORTHO05D005738 1.8e-70 271.6 409 37.7
Psat7g196840 Pisum sativum HOM05D004619 ORTHO05D005738 3.7e-63 247.3 263 45.2
Cpa.g.sc2198.1 Carica papaya HOM05D004619 ORTHO05D005738 3.7e-47 194.1 236 44.1
SGA_v2.0_scaffold163G38073 Striga asiatica HOM05D004619 ORTHO05D005738 3.1e-46 191.0 271 39.1
SMO146G0002 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 1.1e-43 182.6 238 41.6
unitig_578.g16587 Utricularia gibba HOM05D004619 ORTHO05D005738 4.7e-42 177.2 301 35.2
Cpa.g.c44012 Carica papaya HOM05D004619 ORTHO05D005738 1.1e-40 172.6 148 52.7
SMO173G0047 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 4.4e-40 170.6 219 41.6
SMO173G0066 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 9.7e-40 169.5 238 39.1
VMungo0647G1361 Vigna mungo HOM05D004619 ORTHO05D005738 2.8e-39 167.9 240 39.2
unitig_578.g16586 Utricularia gibba HOM05D004619 ORTHO05D005738 7.0e-38 163.3 263 37.3
SMO173G0051 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 1.3e-28 132.5 151 42.4
MCO04G172 Micromonas commoda HOM05D004619 ORTHO05D005738 1.1e-27 129.4 592 24.7
Actinidia14676 Actinidia chinensis HOM05D004619 ORTHO05D005738 2.5e-27 128.3 176 40.9
CBR_g55392 Chara braunii HOM05D000019 ORTHO05D000048 6.1e-26 123.6 169 39.1
SEGI_12145 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 2.0e-24 118.6 123 49.6
CBR_g55391 Chara braunii HOM05D000019 ORTHO05D000002 6.5e-20 103.6 251 30.7
SEGI_32974 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 8.5e-20 103.2 98 49.0
CBR_g55394 Chara braunii HOM05D004619 ORTHO05D005738 3.2e-19 101.3 161 35.4
Lj5g0023577 Lotus japonicus HOM05D004619 ORTHO05D005738 1.7e-15 89.0 145 35.9
arahy.Tifrunner.gnm1.ann1.VKWI5R Arachis hypogaea HOM05D004619 ORTHO05D005738 2.2e-15 88.6 81 51.9
arahy.Tifrunner.gnm1.ann1.2KYU87 Arachis hypogaea HOM05D004619 ORTHO05D005738 2.8e-15 88.2 81 51.9
arahy.Tifrunner.gnm1.ann1.7I309S Arachis hypogaea HOM05D004619 ORTHO05D005738 3.7e-15 87.8 81 51.9
FvH4_4g13810 Fragaria vesca HOM05D004619 ORTHO05D005738 1.2e-13 82.8 108 41.7
arahy.Tifrunner.gnm1.ann1.EP17SZ Arachis hypogaea HOM05D004619 ORTHO05D005738 1.3e-12 79.3 72 54.2
Lsat_1_v5_gn_8_1401 Lactuca sativa HOM05D004619 ORTHO05D005738 6.1e-10 70.5 75 46.7
Cpa.g.sc78.1 Carica papaya HOM05D004619 ORTHO05D005738 1.4e-09 69.3 70 44.3
BolC6t36187H Brassica oleracea HOM05D004619 ORTHO05D005738 5.2e-09 67.4 109 35.8
Lsat_1_v5_gn_4_165860 Lactuca sativa HOM05D004619 ORTHO05D005738 5.2e-09 67.4 69 43.5
SEGI_14473 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 5.2e-09 67.4 51 56.9
Lsat_1_v5_gn_8_131800 Lactuca sativa HOM05D003157 ORTHO05D004447 8.9e-09 66.6 57 56.1
BolC9t59437H Brassica oleracea HOM05D004619 ORTHO05D005738 9.8e-08 63.2 109 33.9
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 1.7e-07 62.4 57 47.4
C09p66170 Brassica napus HOM05D004619 ORTHO05D005738 2.8e-07 61.6 109 33.0
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 1.1e-06 59.7 54 46.3


User provided reference genes

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