Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 0.0e+00 1690.6 955 100.0
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.5e-205 719.9 968 51.5
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 3.7e-188 662.9 970 48.1
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 6.3e-188 662.1 995 47.8
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 3.1e-187 659.8 1014 46.5
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 1.2e-186 657.9 1014 44.8
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 2.2e-185 653.7 1006 46.6
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 3.8e-185 652.9 1068 44.7
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 8.5e-185 651.7 990 46.9
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 3.2e-184 649.8 987 46.7
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 5.5e-184 649.0 997 47.6
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.1e-183 647.1 1017 45.6
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.0e-182 644.8 1053 44.9
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 3.0e-182 643.3 1010 45.1
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 3.9e-182 642.9 1062 44.3
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 5.1e-182 642.5 968 46.6
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 1.1e-181 641.3 991 46.0
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.1e-181 641.3 1058 44.8
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.1e-181 641.3 1062 44.2
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 2.2e-180 637.1 1027 43.7
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 3.7e-180 636.3 1064 44.3
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 4.8e-180 636.0 992 47.8
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.4e-179 634.4 1029 44.9
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 1.8e-179 634.0 953 48.9
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.8e-179 634.0 1029 44.7
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 1.8e-179 634.0 1022 45.9
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.8e-179 634.0 986 48.2
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 2.4e-179 633.6 648 58.6
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 5.3e-179 632.5 1065 44.0
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 6.9e-179 632.1 982 44.8
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 9.1e-179 631.7 1015 45.5
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 1.2e-178 631.3 999 45.3
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.2e-178 631.3 1001 44.5
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 4.5e-178 629.4 1023 45.0
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 1.7e-177 627.5 980 45.3
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 2.9e-177 626.7 1069 43.5
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 5.0e-177 625.9 1002 45.3
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 1.1e-176 624.8 1000 45.7
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.1e-176 624.8 997 45.4
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 1.4e-176 624.4 1019 45.6
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 5.5e-176 622.5 1007 45.5
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 9.4e-176 621.7 996 45.2
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 1.0e-174 618.2 1010 45.0
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 3.0e-174 616.7 1013 44.5
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 8.8e-174 615.1 982 45.8
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 1.5e-173 614.4 1012 44.0
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 5.7e-173 612.5 995 44.2
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 7.4e-173 612.1 1034 44.1
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 9.7e-173 611.7 1020 43.3
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 1.3e-172 611.3 996 43.5
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 1.7e-172 610.9 1010 44.2
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 2.8e-172 610.1 1017 44.0
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 4.8e-172 609.4 1019 44.6
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 6.3e-172 609.0 1034 44.0
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 8.2e-172 608.6 991 45.6
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 8.2e-172 608.6 1000 44.7
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 3.1e-171 606.7 1026 42.7
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 5.3e-171 605.9 1036 43.7
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 5.3e-171 605.9 1014 44.3
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 6.9e-171 605.5 979 44.7
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 1.2e-170 604.7 1032 43.4
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.0e-170 604.0 1013 44.4
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 3.4e-170 603.2 988 44.0
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 1.0e-169 601.7 982 44.0
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 1.0e-169 601.7 1005 45.1
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 2.2e-169 600.5 1011 42.7
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.9e-169 600.1 1021 43.9
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 6.5e-169 599.0 993 43.6
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 6.5e-169 599.0 1011 43.4
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 8.5e-169 598.6 987 44.1
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 1.4e-168 597.8 1005 44.7
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 1.4e-168 597.8 991 43.7
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 3.2e-168 596.7 991 45.8
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 7.2e-168 595.5 1057 41.5
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.1e-167 594.0 1045 41.9
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 6.1e-167 592.4 1042 42.4
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 1.0e-166 591.7 1010 43.2
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.8e-166 590.9 991 43.5
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.8e-166 590.9 1027 43.0
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 2.3e-166 590.5 1039 42.3
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 3.9e-166 589.7 1037 43.7
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.9e-166 589.7 1040 43.0
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 1.5e-165 587.8 850 47.5
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 2.0e-165 587.4 1032 43.5
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 9.7e-165 585.1 1031 43.1
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 9.7e-165 585.1 1017 44.0
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 2.2e-164 583.9 1000 42.4
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.8e-164 583.6 996 43.3
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 4.8e-164 582.8 1004 43.5
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 8.2e-164 582.0 998 42.4
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.1e-163 580.1 979 42.6
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 4.1e-163 579.7 980 45.3
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 5.3e-163 579.3 1050 42.2
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 9.1e-163 578.6 1016 43.0
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 1.2e-162 578.2 845 47.3
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 1.2e-162 578.2 1039 42.1
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.2e-162 578.2 991 42.8
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 1.6e-162 577.8 1030 42.7
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 2.0e-162 577.4 991 42.9
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 2.0e-162 577.4 1051 41.3
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 7.7e-162 575.5 1089 41.8
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.0e-161 575.1 983 44.4
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.3e-161 574.7 1014 43.6
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.9e-161 573.5 976 43.4
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 3.8e-161 573.2 1070 40.9
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 1.9e-160 570.9 1051 41.6
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 2.7e-159 567.0 985 42.8
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 6.1e-159 565.8 976 42.7
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 3.0e-158 563.5 1032 41.8
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 7.5e-157 558.9 943 42.7
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 2.2e-156 557.4 1031 41.9
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 4.8e-156 556.2 992 41.5
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 6.3e-156 555.8 1006 41.8
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 1.1e-155 555.1 963 42.9
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 1.0e-153 548.5 1024 41.7
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 2.2e-153 547.4 973 42.8
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 8.5e-153 545.4 1012 41.3
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 7.2e-152 542.3 1163 38.3
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.7e-145 521.2 982 41.5
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 2.1e-143 514.2 1019 40.4
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 2.8e-143 513.8 1005 40.5
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 1.7e-140 504.6 970 39.7
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 3.7e-132 476.9 754 46.3
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 1.8e-131 474.6 1026 40.2
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 1.8e-126 458.0 1073 37.5
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 4.3e-120 436.8 853 39.0
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 8.1e-119 432.6 492 54.3
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 1.5e-117 428.3 564 50.2
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 2.5e-88 331.3 408 51.5
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 5.5e-51 207.2 871 30.1
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 9.4e-51 206.5 677 31.2
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 1.3e-44 186.0 532 32.9
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 4.7e-42 177.6 512 35.5
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 1.0e-41 176.4 375 38.4
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 7.5e-40 170.2 137 68.6
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 2.0e-37 162.2 694 29.0
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.1e-35 156.4 294 41.8
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 1.0e-33 149.8 666 27.9
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 1.4e-33 149.4 164 53.0
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 4.4e-32 144.4 340 37.9
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 2.8e-31 141.7 200 46.5
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 7.2e-27 127.1 374 32.9
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 7.5e-24 117.1 90 67.8
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 7.5e-24 117.1 632 27.4
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 2.8e-23 115.2 428 30.8
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 1.6e-21 109.4 84 65.5
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 4.5e-21 107.8 149 48.3
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 1.0e-20 106.7 88 62.5
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 5.0e-20 104.4 183 44.3
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 5.6e-19 100.9 442 30.3
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.8e-18 98.6 264 33.7
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 1.4e-17 96.3 111 51.4
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 2.3e-17 95.5 91 56.0
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 3.0e-17 95.1 99 53.5
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 3.4e-16 91.7 84 57.1
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.9e-14 85.9 98 53.1
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 2.4e-14 85.5 64 65.6
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 7.0e-14 84.0 495 25.9
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 8.6e-12 77.0 74 62.2
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 8.6e-12 77.0 119 45.4
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 1.1e-11 76.6 60 71.7
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 1.5e-11 76.3 217 34.6
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 2.8e-10 72.0 338 28.4
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.4e-09 69.7 267 29.6
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.0e-09 68.2 89 46.1
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 8.9e-09 67.0 83 48.2
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 5.8e-08 64.3 92 44.6
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 1.3e-07 63.2 129 38.0
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 2.9e-07 62.0 88 46.6
MBI19_g34543_MAGBIO Magnolia biondii HOM05D003521 ORTHO05D000476 5.4e-06 57.8 49 59.2
Cfa026401 Carpinus fangiana HOM05D003521 ORTHO05D000476 7.0e-06 57.4 708 23.9
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 7.0e-06 57.4 71 50.7
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 9.2e-06 57.0 95 42.1


User provided reference genes

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