Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.6e-176 622.9 356 100.0
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 6.6e-66 255.4 240 54.2
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 1.8e-63 247.3 235 62.6
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 1.5e-62 244.2 232 62.1
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.3e-61 241.1 234 62.4
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 3.7e-61 239.6 235 69.4
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 6.4e-61 238.8 246 53.3
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 1.1e-60 238.0 226 57.5
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 1.9e-60 237.3 233 57.5
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 3.2e-60 236.5 228 57.9
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 3.2e-60 236.5 227 53.3
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 6.0e-59 232.3 227 59.5
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.3e-58 230.3 242 56.2
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 5.0e-58 229.2 241 56.4
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 6.6e-58 228.8 231 60.2
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 8.6e-58 228.4 257 54.5
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.9e-57 227.3 226 52.7
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 3.3e-57 226.5 224 64.3
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 4.3e-57 226.1 241 56.0
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 7.3e-57 225.3 226 52.7
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 7.3e-57 225.3 224 64.3
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 2.8e-56 223.4 229 60.7
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 2.8e-56 223.4 268 61.6
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 3.6e-56 223.0 269 46.8
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 4.7e-56 222.6 226 53.5
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.4e-55 221.1 230 47.8
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 1.8e-55 220.7 227 55.5
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 3.1e-55 219.9 310 45.8
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 3.1e-55 219.9 250 52.8
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 3.1e-55 219.9 250 52.8
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 4.0e-55 219.5 227 55.9
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 4.0e-55 219.5 170 57.1
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.2e-54 218.0 170 57.6
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.2e-54 218.0 223 61.9
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 1.5e-54 217.6 219 57.1
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 1.5e-54 217.6 230 52.6
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.5e-54 217.6 225 58.7
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 2.6e-54 216.9 227 55.5
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 4.4e-54 216.1 230 50.4
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 7.5e-54 215.3 218 57.8
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 7.5e-54 215.3 234 58.1
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 2.9e-53 213.4 227 55.1
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 1.1e-52 211.5 279 50.2
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.1e-52 211.5 160 57.5
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.4e-52 211.1 228 59.2
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 1.9e-52 210.7 225 51.6
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 9.2e-52 208.4 166 62.7
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 9.2e-52 208.4 224 54.9
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 3.5e-51 206.5 287 47.0
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 6.0e-51 205.7 242 50.4
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.0e-50 204.9 228 51.8
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 2.3e-50 203.8 183 62.3
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 3.9e-50 203.0 257 48.2
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.1e-49 201.4 224 54.9
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 1.1e-49 201.4 232 44.4
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.3e-49 199.9 257 51.8
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 1.2e-48 198.0 161 62.7
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 2.1e-48 197.2 210 58.1
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 2.1e-48 197.2 230 53.9
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 4.7e-48 196.1 210 61.0
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 4.7e-48 196.1 235 63.8
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 6.2e-48 195.7 267 44.6
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 6.2e-48 195.7 227 54.6
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 6.2e-48 195.7 203 53.2
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.5e-46 191.0 222 55.0
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 2.0e-46 190.7 164 57.3
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 9.9e-46 188.3 260 44.2
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 9.9e-46 188.3 225 52.9
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 1.7e-45 187.6 260 44.2
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 2.9e-45 186.8 215 57.2
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 7.1e-44 182.2 269 44.2
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 1.2e-43 181.4 225 51.6
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 2.1e-43 180.6 225 49.8
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 2.1e-43 180.6 225 49.8
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 2.7e-43 180.3 228 53.9
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.7e-43 180.3 278 44.6
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 2.7e-43 180.3 242 55.8
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 3.5e-43 179.9 273 49.8
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 4.6e-43 179.5 228 49.1
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 3.0e-42 176.8 220 50.0
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 3.9e-42 176.4 230 48.3
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 1.5e-41 174.5 226 49.1
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 3.3e-41 173.3 183 58.5
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 5.6e-41 172.6 239 49.8
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 7.3e-41 172.2 253 49.0
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 2.1e-40 170.6 228 50.0
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 2.8e-40 170.2 223 48.0
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 2.8e-40 170.2 220 48.6
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 1.8e-39 167.5 215 48.4
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 3.1e-39 166.8 150 64.0
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 6.8e-39 165.6 198 55.1
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 3.4e-38 163.3 168 48.2
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 2.4e-36 157.1 225 50.7
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 7.1e-36 155.6 251 48.6
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 1.2e-35 154.8 220 45.9
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 5.1e-34 149.4 169 49.1
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 1.1e-33 148.3 228 49.1
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 3.3e-33 146.7 158 48.7
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 5.6e-33 146.0 233 48.9
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 9.0e-31 138.7 275 31.6
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 1.5e-30 137.9 211 49.8
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 1.5e-30 137.9 211 49.8
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 2.2e-29 134.0 144 48.6
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 3.8e-29 133.3 230 41.7
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 2.4e-28 130.6 169 53.3
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.3e-26 124.8 119 65.5
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.1e-25 121.7 133 48.1
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.1e-25 121.7 275 33.1
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 4.3e-25 119.8 110 62.7
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 2.2e-21 107.5 218 45.9
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 2.4e-20 104.0 108 62.0
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 3.5e-19 100.1 105 42.9
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.8e-18 97.8 92 50.0
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.8e-15 87.8 109 57.8
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 1.5e-14 84.7 99 64.6
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.1e-11 74.3 43 69.8
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 1.2e-06 58.5 82 31.7


User provided reference genes

Program Settings