Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0008s0182 Marchantia polymorpha HOM05D006162 ORTHO05D007627 0.0e+00 1837.0 928 100.0
Pp3c18_18540 Physcomitrium patens HOM05D006162 ORTHO05D007627 7.1e-96 356.3 921 31.9
SEGI_22619 Sequoiadendron giganteum HOM05D006162 ORTHO05D007627 9.4e-72 276.2 441 38.5
MBI17_g27203_MAGBIO Magnolia biondii HOM05D006162 ORTHO05D007627 6.1e-55 220.3 443 35.2
Gohir.A13G151700 Gossypium hirsutum HOM05D006162 ORTHO05D007627 8.8e-54 216.5 409 33.5
Manes.12G145600 Manihot esculenta HOM05D006162 ORTHO05D007627 8.8e-54 216.5 396 34.6
Gorai.013G176700 Gossypium raimondii HOM05D006162 ORTHO05D007627 1.5e-53 215.7 374 34.8
Ciclev10025253m.g Citrus clementina HOM05D006162 ORTHO05D007627 2.0e-53 215.3 387 35.7
Gohir.D13G156100 Gossypium hirsutum HOM05D006162 ORTHO05D007627 2.6e-53 214.9 394 33.5
Cfa002788 Carpinus fangiana HOM05D006162 ORTHO05D007627 5.7e-53 213.8 363 35.3
COL.COLO4_17421 Corchorus olitorius HOM05D000398 ORTHO05D007627 9.8e-53 213.0 366 33.9
TAR625G0476 Trochodendron aralioides HOM05D006162 ORTHO05D007627 1.3e-52 212.6 393 35.1
THA.LOC104824832 Tarenaya hassleriana HOM05D006162 ORTHO05D007627 2.2e-52 211.8 395 35.2
Thecc.07G145700 Theobroma cacao HOM05D006162 ORTHO05D007627 1.1e-51 209.5 374 33.7
ATR0584G096 Amborella trichopoda HOM05D006162 ORTHO05D007627 2.4e-51 208.4 376 34.0
Thhalv10025021m.g Eutrema salsugineum HOM05D006162 ORTHO05D007627 1.6e-50 205.7 376 35.9
QL06p031367 Quercus lobata HOM05D006162 ORTHO05D007627 1.6e-50 205.7 362 34.5
MD01G1015800 Malus domestica HOM05D006162 ORTHO05D007627 4.5e-50 204.1 401 33.9
Cc07_g16680 Coffea canephora HOM05D006162 ORTHO05D007627 5.9e-50 203.8 404 33.2
Nitab4.5_0000184g0020 Nicotiana tabacum HOM05D006162 ORTHO05D007627 5.9e-50 203.8 352 34.1
Prupe.6G165900 Prunus persica HOM05D006162 ORTHO05D007627 5.9e-50 203.8 399 35.6
Aa31LG6G15910 Aethionema arabicum HOM05D006162 ORTHO05D007627 7.7e-50 203.4 404 32.2
RcHm_v2.0_Chr2g0118111 Rosa chinensis HOM05D006162 ORTHO05D007627 1.0e-49 203.0 366 33.9
C03p77810 Brassica napus HOM05D006162 ORTHO05D007627 1.7e-49 202.2 383 35.2
Potri.007G077100 Populus trichocarpa HOM05D006162 ORTHO05D007627 2.2e-49 201.8 357 35.0
FAN23G1837 Fragaria x ananassa HOM05D006162 ORTHO05D007627 2.9e-49 201.4 405 32.3
TPR.G2184 Trifolium pratense HOM05D006162 ORTHO05D007627 5.0e-49 200.7 355 36.1
FAN28G1724 Fragaria x ananassa HOM05D006162 ORTHO05D007627 6.5e-49 200.3 352 33.8
BcaC01g00286 Brassica carinata HOM05D006162 ORTHO05D007627 8.5e-49 199.9 383 34.7
Medtr8g092350 Medicago truncatula HOM05D006162 ORTHO05D007627 8.5e-49 199.9 388 34.0
Sp7g36490 Schrenkiella parvula HOM05D006162 ORTHO05D007627 8.5e-49 199.9 397 34.5
ClCG02G000880 Citrullus lanatus HOM05D006162 ORTHO05D007627 1.5e-48 199.1 474 30.0
Sopen04g022820 Solanum pennellii HOM05D006162 ORTHO05D007627 1.5e-48 199.1 383 32.6
CsaV3_2G017830 Cucumis sativus L. HOM05D006162 ORTHO05D007627 1.9e-48 198.7 365 33.2
Psat7g049400 Pisum sativum HOM05D006162 ORTHO05D007627 1.9e-48 198.7 401 32.9
TWI79G1464 Tripterygium wilfordii HOM05D006162 ORTHO05D007627 1.9e-48 198.7 398 34.4
CBR_g28670 Chara braunii HOM05D006162 ORTHO05D007627 2.5e-48 198.4 460 32.6
BraA08t34318Z Brassica rapa HOM05D006162 ORTHO05D007627 3.2e-48 198.0 383 34.5
FvH4_1g23260 Fragaria vesca HOM05D006162 ORTHO05D007627 3.2e-48 198.0 352 33.5
Dinv05774 Davidia involucrata HOM05D006162 ORTHO05D007627 4.2e-48 197.6 364 33.0
BcaB03g12289 Brassica carinata HOM05D006162 ORTHO05D007627 9.4e-48 196.4 385 34.3
Glyma.08G145100 Glycine max HOM05D006162 ORTHO05D007627 1.6e-47 195.7 435 32.9
HanXRQChr14g0446061 Helianthus annuus HOM05D006162 ORTHO05D007627 1.6e-47 195.7 371 33.7
Lsat_1_v5_gn_2_67341 Lactuca sativa HOM05D006162 ORTHO05D007627 1.6e-47 195.7 365 33.7
Glyma.05G186500 Glycine max HOM05D006162 ORTHO05D007627 2.7e-47 194.9 473 31.7
GSVIVG01022265001 Vitis vinifera HOM05D006162 ORTHO05D007627 2.7e-47 194.9 350 33.1
A08p23610 Brassica napus HOM05D006162 ORTHO05D007627 3.6e-47 194.5 454 32.4
Migut.H02454 Erythranthe guttata HOM05D006162 ORTHO05D007627 3.6e-47 194.5 457 29.5
ECA238G0813 Erigeron canadensis HOM05D006162 ORTHO05D007627 4.7e-47 194.1 354 33.9
VMungo0251G2144 Vigna mungo HOM05D006162 ORTHO05D007627 6.1e-47 193.7 393 32.6
Eucgr.H04890 Eucalyptus grandis HOM05D006162 ORTHO05D007627 8.0e-47 193.4 358 33.8
BolC3t20037H Brassica oleracea HOM05D006162 ORTHO05D007627 1.0e-46 193.0 391 34.0
Ca_17673_v3 Cicer arietinum L. HOM05D006162 ORTHO05D007627 1.0e-46 193.0 449 32.5
Carub.0007s0129 Capsella rubella HOM05D006162 ORTHO05D007627 1.4e-46 192.6 359 34.8
Phvul.002G267600 Phaseolus vulgaris HOM05D006162 ORTHO05D007627 1.8e-46 192.2 366 32.8
AagrBONN_evm.TU.Sc2ySwM_368.1435 Anthoceros agrestis HOM05D006162 ORTHO05D007627 2.3e-46 191.8 365 35.1
Haze_25085 Corylus avellana HOM05D006162 ORTHO05D007627 5.2e-46 190.7 444 30.9
Nitab4.5_0007426g0010 Nicotiana tabacum HOM05D006162 ORTHO05D007627 5.2e-46 190.7 352 34.7
AT4G39370 Arabidopsis thaliana HOM05D006162 ORTHO05D007627 8.8e-46 189.9 400 33.2
arahy.Tifrunner.gnm1.ann1.QP02N2 Arachis hypogaea HOM05D006162 ORTHO05D007627 1.2e-45 189.5 403 32.5
Aqoxy6G00404 Aquilegia oxysepala HOM05D006162 ORTHO05D007627 1.5e-45 189.1 390 31.3
CAN.G452.13 Capsicum annuum HOM05D006162 ORTHO05D007627 2.6e-45 188.3 389 31.9
Lj4g0017392 Lotus japonicus HOM05D006162 ORTHO05D007627 2.6e-45 188.3 521 29.0
Zm00001eb082910 Zea mays HOM05D006162 ORTHO05D007627 2.6e-45 188.3 376 32.2
AL7G11390 Arabidopsis lyrata HOM05D006162 ORTHO05D007627 3.4e-45 188.0 399 33.3
Hund19624 Selenicereus undatus HOM05D006162 ORTHO05D007627 6.3e-44 183.7 437 28.8
arahy.Tifrunner.gnm1.ann1.2PK97N Arachis hypogaea HOM05D006162 ORTHO05D007627 1.1e-43 183.0 403 32.0
PSO675G6781 Papaver somniferum HOM05D006162 ORTHO05D007627 1.8e-43 182.2 724 25.7
Nitab4.5_0005242g0040 Nicotiana tabacum HOM05D006162 ORTHO05D007627 1.2e-42 179.5 360 34.2
PSO541G4150 Papaver somniferum HOM05D006162 ORTHO05D007627 1.6e-42 179.1 694 25.9
Sed0011946 Sechium edule HOM05D006162 ORTHO05D007627 1.0e-41 176.4 490 30.2
SGA_v2.0_scaffold2G01268 Striga asiatica HOM05D006162 ORTHO05D007627 5.0e-41 174.1 400 31.0
CANSAT01G0187 Cannabis sativa HOM05D006162 ORTHO05D007627 1.1e-40 172.9 350 32.9
Sabra07G0065000 Salix brachista HOM05D006162 ORTHO05D007627 1.1e-40 172.9 347 34.3
AUR62003642 Chenopodium quinoa HOM05D006162 ORTHO05D007627 2.5e-40 171.8 393 30.3
Nn5g27123 Nelumbo nucifera HOM05D006162 ORTHO05D007627 5.6e-40 170.6 397 29.7
CiPaw.03G131500 Carya illinoinensis HOM05D006162 ORTHO05D007627 9.5e-40 169.9 370 30.0
EL10Ac6g15232 Beta vulgaris HOM05D006162 ORTHO05D007627 2.8e-39 168.3 381 29.1
unitig_899.g14618 Utricularia gibba HOM05D006162 ORTHO05D007627 8.0e-39 166.8 410 29.5
Atru.chr4.714 Acer truncatum HOM05D006162 ORTHO05D007627 1.4e-38 166.0 321 33.3
Duzib187G0444 Durio zibethinus HOM05D006162 ORTHO05D007627 1.4e-38 166.0 294 32.7
CDE08G0720 Ceratophyllum demersum HOM05D006162 ORTHO05D007627 1.8e-38 165.6 317 32.2
Cpa.g.sc72.50 Carica papaya HOM05D006162 ORTHO05D007627 4.0e-38 164.5 323 32.5
Rhsim08G0004700 Rhododendron simsii HOM05D006162 ORTHO05D007627 5.2e-38 164.1 595 27.9
Ah.02g123760 Amaranthus hybridus HOM05D006162 ORTHO05D007627 2.0e-37 162.2 355 30.1
Lalb_Chr13g0296311 Lupinus albus HOM05D006162 ORTHO05D007627 9.8e-37 159.8 380 31.1
PGR102G2965 Punica granatum HOM05D006162 ORTHO05D007627 1.1e-35 156.4 415 31.3
SMO340G0295 Selaginella moellendorffii HOM05D006162 ORTHO05D007627 1.8e-35 155.6 243 40.7
Peaxi162Scf00025g03226 Petunia axillaris HOM05D006162 ORTHO05D007627 1.7e-33 149.1 385 28.6
Solyc04g051410.4 Solanum lycopersicum HOM05D006162 ORTHO05D007627 3.0e-33 148.3 296 30.1
vmacro18056 Vaccinium macrocarpon HOM05D006162 ORTHO05D007627 3.9e-33 147.9 317 34.1
DCAR_011465 Daucus carota HOM05D006162 ORTHO05D007627 5.0e-33 147.5 401 29.2
Sc16g0004090 Simmondsia chinensis HOM05D006162 ORTHO05D007627 2.5e-32 145.2 314 28.7
PGSC0003DMG400019694 Solanum tuberosum HOM05D006162 ORTHO05D007627 4.7e-31 141.0 288 29.5
Lj1g0016947 Lotus japonicus HOM05D006162 ORTHO05D007627 8.0e-31 140.2 382 31.2
CSS0015273 Camellia sinensis var. sinensis HOM05D006162 ORTHO05D007627 6.8e-30 137.1 388 28.9
Lj1g0027635 Lotus japonicus HOM05D006162 ORTHO05D007627 5.8e-29 134.0 357 28.6
Lj4A860G2 Lonicera japonica HOM05D006162 ORTHO05D007627 1.9e-27 129.0 375 28.0
Oeu001984.1 Olea europaea HOM05D006162 ORTHO05D007627 3.5e-26 124.8 317 28.1
HPP92_009257 Vanilla planifolia HOM05D006162 ORTHO05D007627 1.9e-24 119.0 274 26.3
CARHR247340 Cardamine hirsuta HOM05D006162 ORTHO05D007627 3.3e-24 118.2 214 37.9
FAN19G1907 Fragaria x ananassa HOM05D006162 ORTHO05D007627 3.2e-19 101.7 348 25.3
Hma1.2p1_1688F.1_g297590 Hydrangea macrophylla HOM05D006162 ORTHO05D007627 5.1e-17 94.4 179 32.4
Zm00001eb159190 Zea mays HOM05D006162 ORTHO05D007627 1.1e-14 86.7 120 43.3
AUR62017952 Chenopodium quinoa HOM05D006162 ORTHO05D007627 6.0e-10 70.9 142 35.2
MELO3C020973.2 Cucumis melo HOM05D006162 ORTHO05D007627 1.3e-09 69.7 194 27.3
Cfa021409 Carpinus fangiana HOM05D000945 ORTHO05D000919 1.5e-08 66.2 413 22.8
Nitab4.5_0002267g0010 Nicotiana tabacum HOM05D000344 ORTHO05D003478 5.6e-08 64.3 451 23.7
Nitab4.5_0000704g0050 Nicotiana tabacum HOM05D000344 ORTHO05D003478 9.6e-08 63.5 451 23.7
vmacro05118 Vaccinium macrocarpon HOM05D000344 ORTHO05D003478 9.6e-08 63.5 353 22.7
Pp3c24_6160 Physcomitrium patens HOM05D000344 ORTHO05D020415 1.2e-07 63.2 234 25.2
HPP92_021954 Vanilla planifolia HOM05D000344 ORTHO05D000934 2.1e-07 62.4 362 21.5
Peaxi162Scf00088g01025 Petunia axillaris HOM05D000344 ORTHO05D003478 2.8e-07 62.0 444 22.7
Nn3g20391 Nelumbo nucifera HOM05D000344 ORTHO05D005714 3.6e-07 61.6 237 25.3
Sc09g0010770 Simmondsia chinensis HOM05D000344 ORTHO05D003478 1.1e-06 60.1 295 25.4
Sopen07g003630 Solanum pennellii HOM05D000344 ORTHO05D003478 1.1e-06 60.1 295 25.4
MBI14_g31379_MAGBIO Magnolia biondii HOM05D000344 ORTHO05D003478 1.8e-06 59.3 365 24.1
HanXRQChr15g0492351 Helianthus annuus HOM05D000344 ORTHO05D005714 2.4e-06 58.9 239 24.3
Peaxi162Scf00025g03225 Petunia axillaris HOM05D006162 ORTHO05D007627 2.4e-06 58.9 107 41.1
SalBow1G4409 Salvia bowleyana HOM05D000344 ORTHO05D003478 2.4e-06 58.9 329 25.8
FAN19G0151 Fragaria x ananassa HOM05D000344 ORTHO05D003478 3.1e-06 58.5 318 24.2
FAN28G2688 Fragaria x ananassa HOM05D000344 ORTHO05D003478 4.0e-06 58.2 318 24.2
AUR62032431 Chenopodium quinoa HOM05D000344 ORTHO05D003478 6.8e-06 57.4 287 24.7
HPP92_027027 Vanilla planifolia HOM05D000344 ORTHO05D003478 6.8e-06 57.4 264 25.0
CAN.G1382.5 Capsicum annuum HOM05D000344 ORTHO05D003478 8.9e-06 57.0 284 26.4
AUR62024790 Chenopodium quinoa HOM05D000344 ORTHO05D003478 8.9e-06 57.0 287 24.7
Dinv01907 Davidia involucrata HOM05D000344 ORTHO05D003478 8.9e-06 57.0 371 22.9
Peaxi162Scf00288g00814 Petunia axillaris HOM05D000344 ORTHO05D000934 8.9e-06 57.0 348 21.8
Solyc04g051400.2 Solanum lycopersicum HOM05D006162 ORTHO05D007627 8.9e-06 57.0 78 44.9


User provided reference genes

Program Settings