Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0142 Marchantia polymorpha HOM05D007241 ORTHO05D009142 3.2e-204 714.9 379 100.0
Pp3c24_19950 Physcomitrium patens HOM05D007241 ORTHO05D009142 1.0e-48 198.4 284 41.5
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 7.5e-36 155.6 320 33.8
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 7.8e-33 145.6 293 33.4
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 1.0e-32 145.2 285 32.3
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 1.7e-32 144.4 332 32.5
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 3.0e-32 143.7 279 34.4
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 3.0e-32 143.7 291 35.4
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 5.1e-32 142.9 319 33.2
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 6.6e-32 142.5 292 32.2
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 1.1e-31 141.7 280 33.6
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.1e-31 141.7 289 33.2
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 1.1e-31 141.7 280 33.6
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 1.5e-31 141.4 291 32.6
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 1.9e-31 141.0 324 34.3
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 1.9e-31 141.0 274 33.2
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 3.3e-31 140.2 297 33.0
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 3.3e-31 140.2 323 33.1
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 3.3e-31 140.2 280 33.6
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 4.3e-31 139.8 299 31.1
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 4.3e-31 139.8 311 32.8
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 4.3e-31 139.8 302 31.8
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 9.5e-31 138.7 302 33.1
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 1.6e-30 137.9 302 30.5
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 2.1e-30 137.5 294 32.3
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 2.8e-30 137.1 286 33.2
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 2.8e-30 137.1 291 31.3
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 2.8e-30 137.1 299 29.8
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 2.8e-30 137.1 292 32.5
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 3.6e-30 136.7 290 29.3
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 4.7e-30 136.3 315 32.1
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 8.1e-30 135.6 336 30.1
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 8.1e-30 135.6 293 33.4
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 8.1e-30 135.6 302 32.1
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 1.1e-29 135.2 297 30.0
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 1.4e-29 134.8 301 29.2
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 1.4e-29 134.8 293 32.8
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 1.4e-29 134.8 328 31.7
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 1.4e-29 134.8 293 33.1
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 1.8e-29 134.4 299 30.4
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 1.8e-29 134.4 323 30.7
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 3.1e-29 133.7 301 29.9
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 3.1e-29 133.7 294 31.6
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 4.0e-29 133.3 295 31.5
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 4.0e-29 133.3 318 30.5
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 5.2e-29 132.9 300 31.7
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 8.9e-29 132.1 293 33.4
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 1.2e-28 131.7 299 31.4
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 2.0e-28 131.0 295 30.5
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 2.0e-28 131.0 301 32.6
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 2.6e-28 130.6 281 30.2
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 3.4e-28 130.2 309 31.7
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 4.4e-28 129.8 317 29.0
CBR_g25746 Chara braunii HOM05D000019 ORTHO05D000048 5.8e-28 129.4 280 30.7
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 9.9e-28 128.6 308 28.9
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 9.9e-28 128.6 305 30.5
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 1.3e-27 128.3 307 32.2
DCAR_010398 Daucus carota HOM05D007241 ORTHO05D009142 2.9e-27 127.1 338 31.1
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 2.9e-27 127.1 337 30.9
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 2.9e-27 127.1 320 30.3
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 3.8e-27 126.7 287 32.1
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 3.8e-27 126.7 309 30.7
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 4.9e-27 126.3 323 30.3
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 4.9e-27 126.3 323 30.0
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 4.9e-27 126.3 314 29.6
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 8.4e-27 125.6 337 29.4
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 8.4e-27 125.6 299 31.4
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 1.1e-26 125.2 293 30.4
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 1.9e-26 124.4 320 28.8
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 3.2e-26 123.6 286 30.4
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 3.2e-26 123.6 298 30.5
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 3.2e-26 123.6 286 29.7
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 3.2e-26 123.6 288 29.9
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 7.1e-26 122.5 309 31.1
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 9.2e-26 122.1 273 32.6
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 1.2e-25 121.7 315 28.9
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 1.2e-25 121.7 288 30.2
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 2.1e-25 120.9 231 30.3
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 6.0e-25 119.4 321 28.7
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 7.8e-25 119.0 313 30.4
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 1.0e-24 118.6 347 27.1
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 3.0e-24 117.1 299 29.4
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 3.9e-24 116.7 293 28.0
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 5.1e-24 116.3 271 29.5
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 1.1e-23 115.2 291 31.3
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 4.3e-23 113.2 263 30.8
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 9.6e-23 112.1 299 28.4
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 2.1e-22 110.9 326 27.6
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 2.8e-22 110.5 272 27.9
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 3.1e-21 107.1 343 27.4
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 4.4e-20 103.2 324 27.8
Zm00001eb063100 Zea mays HOM05D007241 ORTHO05D009142 5.8e-20 102.8 286 25.5
arahy.Tifrunner.gnm1.ann1.D4R6TJ Arachis hypogaea HOM05D007241 ORTHO05D009142 2.9e-19 100.5 166 34.9
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 1.0e-16 92.0 220 29.1
TPR.G8187 Trifolium pratense HOM05D007241 ORTHO05D009142 3.3e-15 87.0 262 25.2
AUR62021204 Chenopodium quinoa HOM05D007241 ORTHO05D009142 7.3e-15 85.9 311 29.6
SMO164G0023 Selaginella moellendorffii HOM05D007241 ORTHO05D009142 9.0e-13 79.0 289 27.3
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 5.4e-10 69.7 195 25.6
COL.COLO4_14646 Corchorus olitorius HOM05D007241 ORTHO05D009142 1.1e-07 62.0 115 35.7
MD12G1157800 Malus domestica HOM05D007241 ORTHO05D009142 2.5e-07 60.8 123 35.8
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 4.3e-07 60.1 88 29.5
Lj3A958T75 Lonicera japonica HOM05D007241 ORTHO05D009142 3.7e-06 57.0 128 32.8


User provided reference genes

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