Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0268 Marchantia polymorpha HOM05D005978 ORTHO05D007472 0.0e+00 3265.3 1661 100.0
Pp3c9_11110 Physcomitrium patens HOM05D005978 ORTHO05D007472 3.9e-302 1042.3 1629 39.6
SEGI_31935 Sequoiadendron giganteum HOM05D005978 ORTHO05D007472 1.2e-274 951.0 1526 38.3
AagrBONN_evm.TU.Sc2ySwM_228.3882 Anthoceros agrestis HOM05D005978 ORTHO05D007472 1.1e-229 801.6 1103 42.0
TAR376G0648 Trochodendron aralioides HOM05D005978 ORTHO05D007472 2.9e-217 760.4 1191 39.8
Nn6g31553 Nelumbo nucifera HOM05D005978 ORTHO05D007472 5.9e-210 736.1 1198 38.4
GSVIVG01013460001 Vitis vinifera HOM05D005978 ORTHO05D007472 1.2e-202 711.8 1208 37.1
Manes.18G000350 Manihot esculenta HOM05D005978 ORTHO05D007472 2.0e-202 711.1 1200 35.8
Glyma.01G245200 Glycine max HOM05D005978 ORTHO05D007472 9.5e-200 702.2 1182 37.6
arahy.Tifrunner.gnm1.ann1.BP04P6 Arachis hypogaea HOM05D005978 ORTHO05D007472 7.5e-197 692.6 1184 36.3
Migut.M00377 Erythranthe guttata HOM05D005978 ORTHO05D007472 4.9e-196 689.9 1207 35.4
Lj1g0010496 Lotus japonicus HOM05D005978 ORTHO05D007472 6.4e-196 689.5 1196 36.8
TPR.G21607 Trifolium pratense HOM05D005978 ORTHO05D007472 1.4e-195 688.3 1176 37.7
Aqoxy1G03258 Aquilegia oxysepala HOM05D005978 ORTHO05D007472 1.6e-194 684.9 1189 37.3
Phvul.002G054600 Phaseolus vulgaris HOM05D005978 ORTHO05D007472 8.6e-193 679.1 1187 36.5
Lalb_Chr16g0376221 Lupinus albus HOM05D005978 ORTHO05D007472 4.3e-192 676.8 1184 36.3
Ciclev10003766m.g Citrus clementina HOM05D005978 ORTHO05D007472 5.6e-192 676.4 1202 36.1
MBI04_g23900_MAGBIO Magnolia biondii HOM05D005978 ORTHO05D007472 7.3e-192 676.0 1234 35.7
Thecc.08G097500 Theobroma cacao HOM05D005978 ORTHO05D007472 1.2e-191 675.2 1189 36.7
Potri.002G001700 Populus trichocarpa HOM05D005978 ORTHO05D007472 1.6e-191 674.9 1192 36.2
arahy.Tifrunner.gnm1.ann1.U7IYJM Arachis hypogaea HOM05D005978 ORTHO05D007472 2.1e-191 674.5 1210 35.5
CiPaw.08G079000 Carya illinoinensis HOM05D005978 ORTHO05D007472 4.7e-191 673.3 1203 36.7
AUR62042533 Chenopodium quinoa HOM05D005978 ORTHO05D007472 1.2e-189 668.7 1199 36.4
A07p42300 Brassica napus HOM05D005978 ORTHO05D007472 1.5e-189 668.3 1191 36.0
TWI36G1144 Tripterygium wilfordii HOM05D005978 ORTHO05D007472 1.5e-189 668.3 1189 35.7
Atru.chr13.20 Acer truncatum HOM05D005978 ORTHO05D007472 5.8e-189 666.4 1203 35.2
BcaC08g47227 Brassica carinata HOM05D005978 ORTHO05D007472 5.8e-189 666.4 1188 36.4
C06p50880 Brassica napus HOM05D005978 ORTHO05D007472 7.5e-189 666.0 1189 36.2
Actinidia15540 Actinidia chinensis HOM05D005978 ORTHO05D007472 2.2e-188 664.5 1200 35.8
CARHR070190 Cardamine hirsuta HOM05D005978 ORTHO05D007472 2.2e-188 664.5 1193 35.9
BraA07t31758Z Brassica rapa HOM05D005978 ORTHO05D007472 3.7e-188 663.7 1191 35.9
Medtr5g004660 Medicago truncatula HOM05D005978 ORTHO05D007472 4.9e-188 663.3 1189 36.4
Dinv30321 Davidia involucrata HOM05D005978 ORTHO05D007472 1.4e-187 661.8 1193 35.6
BolC6t40113H Brassica oleracea HOM05D005978 ORTHO05D007472 3.2e-187 660.6 1189 36.4
HPP92_007456 Vanilla planifolia HOM05D005978 ORTHO05D007472 4.1e-187 660.2 1207 34.9
MD06G1000600 Malus domestica HOM05D005978 ORTHO05D007472 1.2e-186 658.7 1214 35.7
RcHm_v2.0_Chr7g0217581 Rosa chinensis HOM05D005978 ORTHO05D007472 1.2e-186 658.7 1211 36.5
ATR0605G322 Amborella trichopoda HOM05D005978 ORTHO05D007472 2.1e-186 657.9 1131 37.0
EL10Ac1g01856 Beta vulgaris HOM05D005978 ORTHO05D007472 2.1e-186 657.9 1189 36.6
PSO541G4404 Papaver somniferum HOM05D005978 ORTHO05D007472 2.1e-186 657.9 1216 36.4
AL2G36770 Arabidopsis lyrata HOM05D005978 ORTHO05D007472 2.7e-186 657.5 1192 35.4
Hund05194 Selenicereus undatus HOM05D005978 ORTHO05D007472 3.9e-185 653.7 1244 36.3
PSO675G6081 Papaver somniferum HOM05D005978 ORTHO05D007472 5.1e-185 653.3 1212 36.0
PGR031G1913 Punica granatum HOM05D005978 ORTHO05D007472 1.5e-184 651.7 1210 36.4
Sabra02G0001200 Salix brachista HOM05D005978 ORTHO05D007472 1.9e-184 651.4 1228 34.9
Zm00001eb022830 Zea mays HOM05D005978 ORTHO05D007472 5.6e-184 649.8 1211 34.3
AT1G76630 Arabidopsis thaliana HOM05D005978 ORTHO05D007472 1.6e-183 648.3 1192 35.1
Prupe.5G001100 Prunus persica HOM05D005978 ORTHO05D007472 4.7e-183 646.7 1212 36.9
FAN18G0791 Fragaria x ananassa HOM05D005978 ORTHO05D007472 6.2e-183 646.4 1220 36.3
Sopen04g036610 Solanum pennellii HOM05D005978 ORTHO05D007472 8.1e-183 646.0 1197 35.4
FAN13G0154 Fragaria x ananassa HOM05D005978 ORTHO05D007472 1.4e-182 645.2 1214 36.2
FvH4_5g26690 Fragaria vesca HOM05D005978 ORTHO05D007472 2.3e-182 644.4 1220 36.2
Eucgr.F03624 Eucalyptus grandis HOM05D005978 ORTHO05D007472 1.2e-181 642.1 1201 35.0
MSTRG.14837 Avicennia marina HOM05D005978 ORTHO05D007472 1.5e-181 641.7 1197 34.3
ClCG11G019200 Citrullus lanatus HOM05D005978 ORTHO05D007472 5.8e-181 639.8 1228 34.9
ECA232G2674 Erigeron canadensis HOM05D005978 ORTHO05D007472 2.2e-180 637.9 1198 35.2
Haze_22888 Corylus avellana HOM05D005978 ORTHO05D007472 3.2e-179 634.0 1166 35.8
CANSAT64G0954 Cannabis sativa HOM05D005978 ORTHO05D007472 4.1e-179 633.6 1219 34.3
CAN.G1330.32 Capsicum annuum HOM05D005978 ORTHO05D007472 5.4e-179 633.3 1204 35.0
SGA_v2.0_scaffold34G13893 Striga asiatica HOM05D005978 ORTHO05D007472 7.1e-179 632.9 1162 35.7
Gorai.009G185700 Gossypium raimondii HOM05D005978 ORTHO05D007472 9.2e-179 632.5 1213 35.1
SalBow7G3859 Salvia bowleyana HOM05D005978 ORTHO05D007472 1.6e-178 631.7 1200 34.2
Cc10_g00090 Coffea canephora HOM05D005978 ORTHO05D007472 4.6e-178 630.2 1206 34.6
Cpa.g.sc36.98 Carica papaya HOM05D005978 ORTHO05D007472 1.1e-176 625.5 1210 35.0
Os10g0548200 Oryza sativa ssp. japonica HOM05D005978 ORTHO05D007472 3.6e-175 620.5 1204 34.0
Sp5g31790 Schrenkiella parvula HOM05D005978 ORTHO05D007472 4.7e-175 620.2 1188 34.7
BcaC08g47175 Brassica carinata HOM05D005978 ORTHO05D007472 6.2e-175 619.8 1191 34.3
HanXRQChr16g0512201 Helianthus annuus HOM05D005978 ORTHO05D007472 1.1e-174 619.0 1201 34.3
MELO3C017073.2 Cucumis melo HOM05D005978 ORTHO05D007472 1.4e-174 618.6 1191 34.1
Carub.0002s2353 Capsella rubella HOM05D005978 ORTHO05D007472 2.4e-174 617.8 1191 33.9
FAN04G0649 Fragaria x ananassa HOM05D005978 ORTHO05D007472 3.1e-174 617.5 1220 35.3
COL.COLO4_12265 Corchorus olitorius HOM05D005978 ORTHO05D007472 4.0e-174 617.1 1194 35.5
Duzib041G0071 Durio zibethinus HOM05D005978 ORTHO05D007472 6.8e-174 616.3 1194 34.3
Ca_24335_v3 Cicer arietinum L. HOM05D005978 ORTHO05D007472 8.9e-174 615.9 1056 37.6
Thhalv10018029m.g Eutrema salsugineum HOM05D005978 ORTHO05D007472 2.6e-173 614.4 1192 34.2
Sed0020914 Sechium edule HOM05D005978 ORTHO05D007472 2.6e-173 614.4 1184 34.8
QL02p016300 Quercus lobata HOM05D005978 ORTHO05D007472 7.1e-171 606.3 1424 30.9
THA.LOC104812025 Tarenaya hassleriana HOM05D005978 ORTHO05D007472 3.0e-169 600.9 1103 36.8
Lsat_1_v5_gn_9_48081 Lactuca sativa HOM05D005978 ORTHO05D007472 1.9e-168 598.2 1197 33.8
CsaV3_4G037800 Cucumis sativus L. HOM05D005978 ORTHO05D007472 7.3e-168 596.3 1194 34.1
SMO236G0050 Selaginella moellendorffii HOM05D005978 ORTHO05D007472 4.0e-166 590.5 1140 36.8
Psat4g213520 Pisum sativum HOM05D005978 ORTHO05D007472 5.4e-163 580.1 1079 35.7
Rhsim06G0000600 Rhododendron simsii HOM05D005978 ORTHO05D007472 3.0e-161 574.3 1396 31.1
Sc26g0004780 Simmondsia chinensis HOM05D005978 ORTHO05D007472 5.1e-161 573.5 1200 33.6
Solyc04g082980.2 Solanum lycopersicum HOM05D005978 ORTHO05D007472 5.3e-158 563.5 1138 33.7
Aa31LG4G6720 Aethionema arabicum HOM05D005978 ORTHO05D007472 1.3e-156 558.9 1192 33.0
Gohir.A05G177300 Gossypium hirsutum HOM05D005978 ORTHO05D007472 6.9e-150 536.6 1071 34.6
Peaxi162Scf00385g01220 Petunia axillaris HOM05D005978 ORTHO05D007472 3.5e-146 524.2 1241 31.7
AUR62035192 Chenopodium quinoa HOM05D005978 ORTHO05D007472 9.0e-142 509.6 1176 31.7
CSS0007221 Camellia sinensis var. sinensis HOM05D005978 ORTHO05D007472 2.7e-138 498.0 758 39.6
DCAR_022963 Daucus carota HOM05D005978 ORTHO05D007472 7.9e-138 496.5 855 36.5
Ah.11g042550 Amaranthus hybridus HOM05D005978 ORTHO05D007472 6.9e-134 483.4 800 38.2
SMO236G0024 Selaginella moellendorffii HOM05D005978 ORTHO05D007472 2.6e-125 454.9 537 46.7
FAN08G2840 Fragaria x ananassa HOM05D005978 ORTHO05D007472 1.3e-124 452.6 1153 32.3
unitig_899.g15248 Utricularia gibba HOM05D005978 ORTHO05D007472 2.4e-102 378.6 1121 27.8
CDE04G2732 Ceratophyllum demersum HOM05D005978 ORTHO05D007472 2.9e-87 328.6 652 35.0
Dinv04441 Davidia involucrata HOM05D005978 ORTHO05D007472 2.0e-85 322.4 429 41.3
Nitab4.5_0003364g0020 Nicotiana tabacum HOM05D005978 ORTHO05D007472 8.1e-74 283.9 783 30.7
CBR_g3864 Chara braunii HOM05D000019 ORTHO05D000048 7.5e-72 277.3 1118 26.6
Gohir.D05G180700 Gossypium hirsutum HOM05D005978 ORTHO05D007472 2.1e-69 269.2 728 30.6
Nitab4.5_0003364g0080 Nicotiana tabacum HOM05D005978 ORTHO05D007472 5.4e-62 244.6 429 36.8
Nn6g31559 Nelumbo nucifera HOM05D005978 ORTHO05D007472 1.9e-59 236.1 207 56.0
SHI07937 Sapria himalayana HOM05D005978 ORTHO05D007472 2.8e-58 232.3 296 42.6
Oeu013500.1 Olea europaea HOM05D005978 ORTHO05D007472 1.1e-54 220.3 683 27.1
Oeu013502.1 Olea europaea HOM05D005978 ORTHO05D007472 1.4e-49 203.4 175 54.3
SMO124G0009 Selaginella moellendorffii HOM05D005978 ORTHO05D007472 1.7e-47 196.4 349 38.4
vmacro21736 Vaccinium macrocarpon HOM05D005978 ORTHO05D007472 9.9e-40 170.6 384 31.8
Ah.11g042540 Amaranthus hybridus HOM05D005978 ORTHO05D007472 2.0e-32 146.4 430 28.6
Dinv04442 Davidia involucrata HOM05D005978 ORTHO05D007472 1.0e-31 144.1 192 45.3
Dinv04443 Davidia involucrata HOM05D005978 ORTHO05D007472 1.4e-30 140.2 469 26.7
Gohir.D05G180650 Gossypium hirsutum HOM05D005978 ORTHO05D007472 1.2e-29 137.1 202 39.1
Cfa022114 Carpinus fangiana HOM05D005978 ORTHO05D007472 1.1e-27 130.6 874 22.8
SEGI_02012 Sequoiadendron giganteum HOM05D011033 ORTHO05D015595 4.2e-22 112.1 296 28.4
MCO08G135 Micromonas commoda HOM05D005978 ORTHO05D007472 5.3e-17 95.1 943 22.7
Cre12.g493550 Chlamydomonas reinhardtii HOM05D005978 ORTHO05D007472 6.9e-17 94.7 891 21.9
CDE04G3357 Ceratophyllum demersum HOM05D005978 ORTHO05D007472 1.7e-15 90.1 279 28.0
Rhsim06G0014600 Rhododendron simsii HOM05D000267 ORTHO05D002764 8.8e-12 77.8 107 43.9
SHI07938 Sapria himalayana HOM05D005978 ORTHO05D007472 5.7e-11 75.1 146 29.5
CSS0044033 Camellia sinensis var. sinensis HOM05D005978 ORTHO05D007472 5.3e-09 68.6 112 37.5
arahy.Tifrunner.gnm1.ann1.G030KM Arachis hypogaea HOM05D005978 ORTHO05D007472 6.9e-09 68.2 205 27.3
C07p29320 Brassica napus HOM05D005978 ORTHO05D007472 4.2e-06 58.9 46 54.3
BolC7t43475H Brassica oleracea HOM05D005978 ORTHO05D007472 9.4e-06 57.8 46 54.3


User provided reference genes

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