Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 0.0e+00 1309.7 636 100.0
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 3.0e-263 911.8 548 80.5
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 6.7e-263 910.6 548 80.3
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 1.1e-260 903.3 537 80.6
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 7.0e-260 900.6 541 81.5
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 2.0e-259 899.0 541 81.0
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 2.0e-259 899.0 548 80.1
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 2.6e-259 898.7 548 79.6
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 2.9e-258 895.2 548 79.2
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 3.8e-258 894.8 542 81.4
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 5.0e-258 894.4 543 80.1
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 8.5e-258 893.6 542 80.1
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 1.9e-257 892.5 542 79.5
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 9.4e-257 890.2 543 79.7
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 3.6e-256 888.3 542 79.3
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.5e-254 882.9 542 78.8
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 2.6e-254 882.1 544 79.6
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 1.3e-253 879.8 549 79.2
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 7.0e-252 874.0 542 78.2
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 7.7e-251 870.5 544 79.0
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 1.0e-250 870.2 544 78.5
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.3e-250 869.8 549 78.0
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 6.5e-250 867.5 549 76.5
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.2e-248 863.2 549 76.7
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 6.1e-248 860.9 544 78.1
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 8.0e-248 860.5 544 77.9
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 8.8e-247 857.1 541 76.3
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 2.0e-246 855.9 549 76.9
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 3.7e-245 851.7 540 75.2
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.8e-245 851.3 541 77.4
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 2.7e-243 845.5 548 75.4
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 2.9e-242 842.0 549 75.0
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 6.5e-242 840.9 548 75.0
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 1.5e-241 839.7 548 75.0
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 1.9e-241 839.3 548 75.2
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 2.5e-241 839.0 535 74.8
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 9.4e-241 837.0 543 74.6
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 1.4e-239 833.2 551 74.0
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 4.0e-239 831.6 547 74.8
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 4.0e-239 831.6 541 75.4
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 2.6e-238 828.9 548 74.5
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 2.6e-238 828.9 535 74.4
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 3.4e-238 828.6 540 74.1
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 3.4e-238 828.6 542 74.5
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 4.4e-238 828.2 539 74.2
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 5.7e-238 827.8 499 80.4
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 7.5e-238 827.4 535 73.6
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 9.8e-238 827.0 545 73.0
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 2.2e-237 825.9 548 73.4
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 3.7e-237 825.1 540 74.6
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 4.9e-237 824.7 548 73.0
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 1.1e-236 823.5 548 73.5
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 7.0e-236 820.8 535 73.8
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 4.5e-235 818.1 549 73.6
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 7.7e-235 817.4 543 73.5
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 1.3e-234 816.6 631 66.4
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 5.0e-234 814.7 548 72.3
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 1.9e-233 812.8 526 76.4
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 7.3e-233 810.8 565 71.9
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 1.4e-231 806.6 539 71.8
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 3.0e-231 805.4 549 73.2
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 8.9e-231 803.9 550 72.7
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 2.0e-230 802.7 543 72.7
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 2.6e-230 802.4 548 71.5
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 5.7e-230 801.2 565 71.0
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 7.5e-230 800.8 541 70.6
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.2e-229 799.3 565 72.0
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 4.9e-229 798.1 543 73.3
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 6.4e-229 797.7 548 71.9
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 8.3e-229 797.3 550 72.0
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 1.1e-228 797.0 549 70.3
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 1.8e-228 796.2 547 72.9
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 1.8e-228 796.2 543 71.8
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 3.5e-227 792.0 549 69.4
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 1.8e-223 779.6 529 71.1
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 3.1e-223 778.9 548 68.6
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 1.2e-222 776.9 549 69.0
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 2.0e-222 776.2 557 69.1
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 7.5e-222 774.2 549 68.9
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 1.7e-221 773.1 548 68.6
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 1.7e-221 773.1 549 68.7
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 4.9e-221 771.5 549 68.7
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 2.4e-220 769.2 535 68.8
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 9.2e-220 767.3 547 68.0
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 4.6e-219 765.0 547 68.2
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 1.3e-218 763.5 548 69.3
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 1.9e-217 759.6 549 68.3
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 1.2e-214 750.4 538 68.2
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 1.9e-212 743.0 603 62.0
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 5.1e-210 734.9 551 66.6
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 3.6e-208 728.8 542 65.7
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 1.9e-201 706.4 554 64.8
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 4.0e-199 698.7 516 64.9
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 9.3e-196 687.6 548 65.5
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 3.0e-194 682.6 437 75.3
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 7.4e-185 651.4 554 61.0
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 2.1e-184 649.8 397 78.6
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 7.1e-172 608.2 549 58.8
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 5.7e-161 572.0 536 53.9
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 9.7e-161 571.2 533 55.0
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 5.9e-158 562.0 529 58.6
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 4.2e-148 529.3 552 50.4
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 3.3e-145 519.6 536 50.7
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 4.2e-140 502.7 353 69.4
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 1.7e-136 490.7 514 50.8
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 1.8e-127 460.7 532 47.2
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 1.6e-118 431.0 337 68.8
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 2.8e-115 420.2 492 48.0
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 1.4e-111 407.9 303 69.0
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 5.4e-111 406.0 357 59.4
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 3.9e-109 399.8 487 44.4
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 9.5e-108 395.2 519 45.3
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 4.7e-107 392.9 475 46.5
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 4.1e-103 379.8 504 42.3
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 3.3e-100 370.2 224 76.3
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 2.3e-98 364.0 324 57.1
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 6.4e-80 302.8 271 57.6
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 1.6e-62 245.0 199 64.3
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 9.0e-58 229.2 157 72.6
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 9.7e-44 182.6 112 77.7
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 1.2e-38 165.6 174 56.3
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 3.6e-38 164.1 101 78.2
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.6e-30 138.7 100 70.0
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 3.8e-24 117.5 61 90.2
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 2.3e-21 108.2 151 45.0
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 1.1e-18 99.4 62 71.0
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 3.2e-15 87.8 59 67.8
SHI28556 Sapria himalayana HOM05D005873 ORTHO05D007582 2.0e-09 68.6 49 59.2
RcHm_v2.0_Chr2g0132441 Rosa chinensis HOM05D005873 ORTHO05D007582 3.3e-07 61.2 39 74.4
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 1.6e-06 58.9 35 71.4


User provided reference genes

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