Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 6.8e-201 703.7 345 100.0
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 3.9e-156 555.1 347 79.8
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 1.5e-155 553.1 344 79.1
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 2.5e-155 552.4 347 79.5
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 4.3e-155 551.6 350 78.0
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 3.6e-154 548.5 347 79.3
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 3.6e-154 548.5 347 79.3
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 8.1e-154 547.4 335 80.6
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 2.6e-152 542.3 334 80.8
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 4.5e-152 541.6 343 79.6
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 2.2e-151 539.3 348 77.3
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 4.2e-150 535.0 334 80.5
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 1.2e-149 533.5 321 81.3
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 1.3e-146 523.5 344 76.2
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 2.1e-146 522.7 336 78.9
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 3.1e-145 518.8 339 76.7
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 1.2e-144 516.9 335 77.0
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 1.2e-144 516.9 366 71.9
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 2.9e-143 512.3 336 77.1
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 6.4e-143 511.1 339 75.2
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.4e-142 510.0 335 76.4
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.9e-142 509.6 340 73.8
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 5.5e-142 508.1 327 77.1
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 7.1e-142 507.7 335 73.4
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 3.5e-141 505.4 312 79.8
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 4.6e-141 505.0 328 76.2
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 6.0e-141 504.6 333 76.9
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 1.8e-140 503.1 336 75.3
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 3.0e-140 502.3 326 76.7
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 3.9e-140 501.9 335 74.0
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 5.1e-140 501.5 304 79.3
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 8.7e-140 500.7 309 79.3
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 1.1e-139 500.4 324 75.3
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 3.3e-139 498.8 340 73.8
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 3.3e-139 498.8 339 72.0
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 5.6e-139 498.0 341 73.3
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 7.4e-139 497.7 333 75.1
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 7.4e-139 497.7 317 76.0
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 7.4e-139 497.7 336 72.6
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 9.6e-139 497.3 335 73.1
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 1.3e-138 496.9 334 73.7
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 1.3e-138 496.9 334 72.5
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 2.1e-138 496.1 334 74.0
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 2.1e-138 496.1 336 74.1
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 1.1e-137 493.8 321 76.9
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.8e-137 493.0 340 74.1
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 2.4e-137 492.7 335 71.3
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 3.1e-137 492.3 317 77.3
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 3.1e-137 492.3 324 73.8
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 5.3e-137 491.5 335 71.3
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 2.6e-136 489.2 339 71.4
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 1.4e-134 483.4 331 71.6
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 1.4e-134 483.4 335 72.5
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 1.9e-134 483.0 317 75.4
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 3.5e-133 478.8 327 72.8
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 4.6e-133 478.4 336 71.4
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 4.6e-133 478.4 339 72.6
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 6.7e-132 474.6 337 69.4
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 5.7e-131 471.5 339 69.9
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 2.4e-129 466.1 337 69.4
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 4.1e-129 465.3 328 73.5
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 6.9e-129 464.5 272 81.2
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 6.9e-129 464.5 268 81.7
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 1.5e-128 463.4 328 73.2
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 2.0e-128 463.0 306 74.2
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 1.0e-127 460.7 334 69.5
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 2.2e-127 459.5 307 73.9
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 2.2e-127 459.5 305 73.8
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 2.2e-127 459.5 305 73.8
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 3.8e-127 458.8 334 69.5
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 5.0e-127 458.4 330 70.0
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 1.9e-126 456.4 247 87.9
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 7.2e-126 454.5 293 74.7
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 9.3e-126 454.1 305 72.8
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 9.3e-126 454.1 305 72.8
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 9.3e-126 454.1 331 69.2
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 1.2e-125 453.8 305 72.8
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 1.6e-125 453.4 303 72.3
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 7.9e-125 451.1 311 71.7
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 1.8e-124 449.9 306 72.9
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 1.9e-123 446.4 335 68.4
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 4.3e-123 445.3 308 70.5
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 6.3e-122 441.4 324 68.5
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 8.2e-122 441.0 307 71.7
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 1.8e-121 439.9 308 69.8
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 9.1e-121 437.6 336 67.3
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 1.2e-120 437.2 307 71.7
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 3.4e-120 435.6 315 67.3
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 5.9e-120 434.9 232 89.7
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.9e-118 429.9 334 67.1
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 9.4e-118 427.6 319 67.1
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.2e-117 427.2 297 70.7
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 1.4e-116 423.7 337 64.1
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 3.3e-115 419.1 339 66.1
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 3.3e-115 419.1 256 78.5
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 5.3e-113 411.8 217 88.5
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 3.6e-109 399.1 288 70.1
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 2.2e-106 389.8 308 63.6
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 3.2e-102 375.9 322 60.6
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 1.5e-91 340.5 315 54.9
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 2.0e-91 340.1 183 88.5
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 2.0e-91 340.1 183 88.5
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 1.3e-90 337.4 233 67.0
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 1.3e-87 327.4 242 68.2
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 2.4e-81 306.6 305 50.2
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 2.7e-80 303.1 197 76.1
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 1.8e-73 280.4 200 66.5
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 1.4e-68 264.2 189 65.1
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 4.4e-67 259.2 150 84.0
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 7.5e-59 231.9 201 58.2
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 6.4e-42 175.6 167 50.3
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 4.9e-34 149.4 145 55.9
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 1.4e-33 147.9 78 87.2
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 1.7e-26 124.4 140 47.1
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.1e-20 105.1 66 75.8
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 1.9e-09 67.8 254 30.3
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 1.9e-09 67.8 52 63.5
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 3.0e-07 60.5 167 29.9
Eucgr.C04044 Eucalyptus grandis HOM05D003204 ORTHO05D003566 1.1e-06 58.5 168 30.4
Eucgr.L00627 Eucalyptus grandis HOM05D003204 ORTHO05D003566 1.1e-06 58.5 168 30.4
Sp6g19740 Schrenkiella parvula HOM05D003204 ORTHO05D003566 1.9e-06 57.8 167 31.1
Lalb_Chr07g0179701 Lupinus albus HOM05D003204 ORTHO05D003566 3.3e-06 57.0 167 29.9
BcaB08g36152 Brassica carinata HOM05D003204 ORTHO05D003566 7.4e-06 55.8 170 28.2
BcaC03g14125 Brassica carinata HOM05D003204 ORTHO05D003566 7.4e-06 55.8 167 30.5
BraA10t43619Z Brassica rapa HOM05D003204 ORTHO05D003566 7.4e-06 55.8 169 29.0
THA.LOC104811838 Tarenaya hassleriana HOM05D003204 ORTHO05D003566 9.7e-06 55.5 170 27.1


User provided reference genes

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