Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G037000 Manihot esculenta HOM05D005259 ORTHO05D006402 0.0e+00 2004.6 997 100.0
Manes.03G168800 Manihot esculenta HOM05D005259 ORTHO05D006402 0.0e+00 1298.1 1011 67.7
Potri.010G076700 Populus trichocarpa HOM05D005259 ORTHO05D006402 3.4e-261 905.6 1028 50.8
Potri.008G162500 Populus trichocarpa HOM05D005259 ORTHO05D006402 3.9e-257 892.1 1058 48.9
Sabra08G0123900 Salix brachista HOM05D005259 ORTHO05D006402 3.4e-245 852.4 1042 47.2
Atru.chr4.2229 Acer truncatum HOM05D005259 ORTHO05D006402 1.3e-220 770.8 1062 45.0
Ciclev10004215m.g Citrus clementina HOM05D005259 ORTHO05D006402 2.8e-215 753.1 1069 44.1
Sabra10G0032100 Salix brachista HOM05D005259 ORTHO05D006402 5.3e-214 748.8 999 45.6
Cfa008379 Carpinus fangiana HOM05D005259 ORTHO05D006402 6.5e-212 741.9 1021 44.1
Thecc.04G246200 Theobroma cacao HOM05D005259 ORTHO05D006402 1.5e-208 730.7 1080 43.1
Duzib052G0218 Durio zibethinus HOM05D005259 ORTHO05D006402 6.1e-202 708.8 1051 43.6
Duzib151G0402 Durio zibethinus HOM05D005259 ORTHO05D006402 1.0e-201 708.0 1069 43.1
Duzib212G1015 Durio zibethinus HOM05D005259 ORTHO05D006402 7.4e-200 701.8 1064 43.0
CiPaw.01G190300 Carya illinoinensis HOM05D005259 ORTHO05D001287 8.2e-199 698.4 1018 44.2
COL.COLO4_15792 Corchorus olitorius HOM05D005259 ORTHO05D006402 4.5e-197 692.6 1054 42.6
TAR362G0225 Trochodendron aralioides HOM05D005259 ORTHO05D006402 8.5e-196 688.3 1127 40.2
TAR633G1135 Trochodendron aralioides HOM05D005259 ORTHO05D006402 1.3e-191 674.5 1106 40.3
CiPaw.02G116300 Carya illinoinensis HOM05D005259 ORTHO05D006402 1.6e-186 657.5 1040 41.6
Cpa.g.sc58.48 Carica papaya HOM05D005259 ORTHO05D006402 2.7e-186 656.8 1058 41.7
Potri.008G162150 Populus trichocarpa HOM05D005259 ORTHO05D006402 4.7e-186 656.0 892 44.1
TWI73G0531 Tripterygium wilfordii HOM05D005259 ORTHO05D006402 4.5e-181 639.4 1050 40.2
Prupe.1G030800 Prunus persica HOM05D005259 ORTHO05D006402 1.3e-180 637.9 1056 40.3
CSS0027429 Camellia sinensis var. sinensis HOM05D005259 ORTHO05D006402 3.4e-176 623.2 1058 39.8
QL06p015741 Quercus lobata HOM05D005259 ORTHO05D006402 2.4e-174 617.1 1035 39.6
CSS0043582 Camellia sinensis var. sinensis HOM05D005259 ORTHO05D006402 2.7e-173 613.6 1054 39.6
RcHm_v2.0_Chr4g0390511 Rosa chinensis HOM05D005259 ORTHO05D006402 1.5e-160 571.2 1067 38.1
MD16G1208700 Malus domestica HOM05D005259 ORTHO05D006402 2.2e-159 567.4 1062 37.0
FAN12G0451 Fragaria x ananassa HOM05D005259 ORTHO05D006402 4.9e-151 539.7 1067 36.3
Hma1.2p1_0650F.1_g195420 Hydrangea macrophylla HOM05D005259 ORTHO05D006402 4.9e-151 539.7 1065 36.1
Actinidia04478 Actinidia chinensis HOM05D005259 ORTHO05D002253 1.3e-148 531.6 1028 37.0
FvH4_4g02690 Fragaria vesca HOM05D005259 ORTHO05D006402 1.3e-148 531.6 1070 36.2
FAN22G1888 Fragaria x ananassa HOM05D005259 ORTHO05D006402 3.0e-148 530.4 1075 35.3
GSVIVG01018119001 Vitis vinifera HOM05D005259 ORTHO05D006402 2.0e-144 517.7 1072 35.3
Glyma.01G234600 Glycine max HOM05D005259 ORTHO05D006402 7.6e-144 515.8 1052 35.2
Peaxi162Scf00813g00016 Petunia axillaris HOM05D005259 ORTHO05D006402 2.2e-143 514.2 1047 35.0
ClCG05G004600 Citrullus lanatus HOM05D005259 ORTHO05D006402 2.9e-143 513.8 1038 35.5
FAN17G1158 Fragaria x ananassa HOM05D005259 ORTHO05D006402 1.9e-142 511.1 1083 35.3
Glyma.11G008300 Glycine max HOM05D005259 ORTHO05D006402 2.4e-142 510.8 1051 34.8
VMungo1215G2763 Vigna mungo HOM05D005259 ORTHO05D006402 2.4e-142 510.8 1052 35.0
Phvul.002G042000 Phaseolus vulgaris HOM05D005259 ORTHO05D006402 9.2e-142 508.8 1040 34.9
CAN.G1007.13 Capsicum annuum HOM05D005259 ORTHO05D006402 2.3e-140 504.2 1045 34.5
Sed0002321 Sechium edule HOM05D005259 ORTHO05D006402 2.5e-139 500.7 1044 35.2
Sc13g0005040 Simmondsia chinensis HOM05D005259 ORTHO05D006402 8.1e-138 495.7 1063 34.7
LjContig00222g0005017 Lotus japonicus HOM05D005259 ORTHO05D006402 1.1e-137 495.4 1046 34.0
PGSC0003DMG400001126 Solanum tuberosum HOM05D005259 ORTHO05D006402 7.6e-136 489.2 1022 34.2
MELO3C006469.2 Cucumis melo HOM05D005259 ORTHO05D006402 9.9e-136 488.8 1032 34.9
arahy.Tifrunner.gnm1.ann1.SM0BS0 Arachis hypogaea HOM05D005259 ORTHO05D006402 2.9e-135 487.3 1025 34.7
Nn1g02609 Nelumbo nucifera HOM05D005259 ORTHO05D006402 5.4e-134 483.0 1151 32.3
MBI04_g07579_MAGBIO Magnolia biondii HOM05D005259 ORTHO05D006402 7.3e-131 472.6 1147 33.2
Sopen09g032310 Solanum pennellii HOM05D005259 ORTHO05D006402 6.2e-130 469.5 1027 33.6
CsaV3_3G012580 Cucumis sativus L. HOM05D005259 ORTHO05D006402 7.6e-128 462.6 1032 34.2
Eucgr.H03158 Eucalyptus grandis HOM05D005259 ORTHO05D006402 1.3e-127 461.8 918 36.9
Lalb_Chr09g0320051 Lupinus albus HOM05D005259 ORTHO05D006402 2.7e-125 454.1 1029 32.5
MD13G1207300 Malus domestica HOM05D005259 ORTHO05D006402 6.0e-125 453.0 1036 33.6
Nitab4.5_0004798g0010 Nicotiana tabacum HOM05D005259 ORTHO05D006402 7.9e-125 452.6 1031 33.5
Cc03_g04860 Coffea canephora HOM05D005259 ORTHO05D006402 8.7e-124 449.1 1055 33.9
Oeu049793.2 Olea europaea HOM05D005259 ORTHO05D006402 2.5e-123 447.6 1053 32.4
Medtr5g007040 Medicago truncatula HOM05D005259 ORTHO05D006402 6.2e-122 443.0 801 37.8
Gohir.A09G223300 Gossypium hirsutum HOM05D005259 ORTHO05D006402 1.1e-121 442.2 1017 35.0
Sed0017180 Sechium edule HOM05D005259 ORTHO05D006402 2.4e-121 441.0 1021 33.6
vmacro08412 Vaccinium macrocarpon HOM05D005259 ORTHO05D006402 2.4e-121 441.0 1042 33.1
Gorai.006G246800 Gossypium raimondii HOM05D005259 ORTHO05D006402 4.5e-120 436.8 1007 34.9
Rhsim04G0190300 Rhododendron simsii HOM05D005259 ORTHO05D006402 4.5e-120 436.8 1029 32.9
Gohir.D09G225300 Gossypium hirsutum HOM05D005259 ORTHO05D006402 9.9e-120 435.6 1012 34.6
Nn3g19539 Nelumbo nucifera HOM05D005259 ORTHO05D006402 1.7e-119 434.9 1137 31.3
TPR.G37888 Trifolium pratense HOM05D005259 ORTHO05D006402 1.6e-117 428.3 1055 31.7
Dinv29911 Davidia involucrata HOM05D005259 ORTHO05D006402 3.5e-117 427.2 584 44.5
PSO832G3620 Papaver somniferum HOM05D005259 ORTHO05D006402 2.3e-116 424.5 1099 31.4
PSO210G6035 Papaver somniferum HOM05D005259 ORTHO05D006402 3.0e-116 424.1 1099 31.2
Aqoxy5G00317 Aquilegia oxysepala HOM05D005259 ORTHO05D006402 1.9e-115 421.4 1134 31.2
Psat2g189680 Pisum sativum HOM05D005259 ORTHO05D006402 4.0e-113 413.7 1009 31.3
Oeu003588.2 Olea europaea HOM05D005259 ORTHO05D006402 1.4e-110 405.2 914 33.2
Nitab4.5_0000525g0240 Nicotiana tabacum HOM05D005259 ORTHO05D006402 1.1e-107 395.6 1029 31.7
Thhalv10003150m.g Eutrema salsugineum HOM05D005259 ORTHO05D006402 2.6e-104 384.4 1020 31.9
MSTRG.9924 Avicennia marina HOM05D005259 ORTHO05D006402 1.0e-103 382.5 1050 32.1
MSTRG.24702 Avicennia marina HOM05D005259 ORTHO05D006402 5.0e-103 380.2 1041 31.8
Sp2g08420 Schrenkiella parvula HOM05D005259 ORTHO05D006402 1.4e-102 378.6 1029 32.7
Actinidia40086 Actinidia chinensis HOM05D005259 ORTHO05D006402 5.1e-100 370.2 1001 30.6
Aa31LG5G3600 Aethionema arabicum HOM05D005259 ORTHO05D006402 1.1e-97 362.5 1036 31.4
Ca_24427_v3 Cicer arietinum L. HOM05D005259 ORTHO05D006402 6.9e-97 359.8 1021 31.1
AT5G43630 Arabidopsis thaliana HOM05D005259 ORTHO05D006402 5.9e-96 356.7 1013 31.6
Carub.0008s0502 Capsella rubella HOM05D005259 ORTHO05D006402 2.5e-94 351.3 738 36.0
BcaC06g31686 Brassica carinata HOM05D005259 ORTHO05D006402 1.6e-93 348.6 1018 31.6
A06p47780 Brassica napus HOM05D005259 ORTHO05D006402 1.8e-89 335.1 1026 30.8
BraA06t27646Z Brassica rapa HOM05D005259 ORTHO05D006402 5.3e-89 333.6 1026 31.2
BolC7t43150H Brassica oleracea HOM05D005259 ORTHO05D006402 1.2e-88 332.4 824 33.6
BcaC06g34639 Brassica carinata HOM05D005259 ORTHO05D006402 2.0e-88 331.6 823 33.7
C07p26220 Brassica napus HOM05D005259 ORTHO05D006402 2.6e-88 331.3 824 33.6
Dinv44635 Davidia involucrata HOM05D005259 ORTHO05D006402 9.1e-81 306.2 485 40.8
BcaB07g30565 Brassica carinata HOM05D005259 ORTHO05D006402 5.9e-80 303.5 708 34.3
DCAR_002351 Daucus carota HOM05D005259 ORTHO05D006402 8.5e-79 299.7 774 32.4
Haze_11300 Corylus avellana HOM05D005259 ORTHO05D006402 1.6e-77 295.4 408 44.4
ATR0665G554 Amborella trichopoda HOM05D005259 ORTHO05D006402 7.5e-75 286.6 1070 27.2
CDE07G1991 Ceratophyllum demersum HOM05D000989 ORTHO05D006402 2.3e-68 265.0 736 29.8
Dinv44634 Davidia involucrata HOM05D005259 ORTHO05D006402 1.2e-61 242.7 252 53.2
Medtr6g046940 Medicago truncatula HOM05D005259 ORTHO05D006402 3.6e-61 241.1 662 31.7
Nitab4.5_0004798g0040 Nicotiana tabacum HOM05D005259 ORTHO05D006402 8.0e-61 240.0 523 33.7
CARHR006260 Cardamine hirsuta HOM05D005259 ORTHO05D006402 2.6e-59 235.0 537 33.7
Actinidia08443 Actinidia chinensis HOM05D005259 ORTHO05D006402 1.2e-53 216.1 332 38.3
Glyma.10G185100 Glycine max HOM05D005259 ORTHO05D006402 2.9e-50 204.9 740 28.4
Nitab4.5_0000525g0230 Nicotiana tabacum HOM05D005259 ORTHO05D006402 2.9e-50 204.9 495 34.7
Actinidia08442 Actinidia chinensis HOM05D005259 ORTHO05D006402 1.7e-47 195.7 341 39.0
THA.LOC104815985 Tarenaya hassleriana HOM05D000856 ORTHO05D001792 5.0e-47 194.1 306 36.9
Solyc09g083390.3 Solanum lycopersicum HOM05D005259 ORTHO05D006402 6.6e-47 193.7 614 28.8
Migut.G00437 Erythranthe guttata HOM05D005259 ORTHO05D006402 7.3e-46 190.3 973 25.5
VMungo0720G1316 Vigna mungo HOM05D005259 ORTHO05D006402 9.5e-46 189.9 727 28.2
Lalb_Chr02g0150411 Lupinus albus HOM05D005259 ORTHO05D006402 1.6e-45 189.1 699 28.9
Lalb_Chr06g0169311 Lupinus albus HOM05D005259 ORTHO05D006402 2.6e-43 181.8 687 28.2
Actinidia05464 Actinidia chinensis HOM05D005259 ORTHO05D006402 1.3e-42 179.5 173 51.4
SGA_v2.0_scaffold88G27281 Striga asiatica HOM05D005259 ORTHO05D006402 1.1e-41 176.4 330 33.9
Dinv29910 Davidia involucrata HOM05D005259 ORTHO05D006402 5.4e-41 174.1 252 42.5
Lsat_1_v5_gn_5_72841 Lactuca sativa HOM05D005259 ORTHO05D006402 1.1e-38 166.4 244 40.2
Os01g0775100 Oryza sativa ssp. japonica HOM05D005259 ORTHO05D006402 3.3e-38 164.9 729 26.6
Lj5g0013708 Lotus japonicus HOM05D005259 ORTHO05D006402 4.3e-38 164.5 712 26.7
Nitab4.5_0000036g0130 Nicotiana tabacum HOM05D005259 ORTHO05D006402 2.1e-37 162.2 159 55.3
ECA240G1753 Erigeron canadensis HOM05D005259 ORTHO05D006402 1.2e-35 156.4 173 50.3
HanXRQChr15g0468851 Helianthus annuus HOM05D005259 ORTHO05D006402 7.5e-35 153.7 159 50.9
Lsat_1_v5_gn_3_123200 Lactuca sativa HOM05D005259 ORTHO05D006402 1.3e-34 152.9 144 54.9
ECA233G4142 Erigeron canadensis HOM05D005259 ORTHO05D006402 2.9e-34 151.8 159 50.9
Migut.N00239 Erythranthe guttata HOM05D005259 ORTHO05D006402 2.9e-34 151.8 749 27.2
HanXRQChr13g0424471 Helianthus annuus HOM05D005259 ORTHO05D006402 6.4e-34 150.6 153 51.6
Lj6A656T71 Lonicera japonica HOM05D005259 ORTHO05D006402 1.1e-33 149.8 145 56.6
Phvul.007G125900 Phaseolus vulgaris HOM05D005259 ORTHO05D006402 1.1e-33 149.8 726 25.5
RcHm_v2.0_Chr7g0198831 Rosa chinensis HOM05D005259 ORTHO05D006402 1.1e-30 139.8 157 45.9
HanXRQChr03g0092361 Helianthus annuus HOM05D005259 ORTHO05D006402 1.9e-30 139.0 171 43.9
Cc00_g33140 Coffea canephora HOM05D005259 ORTHO05D006402 4.7e-29 134.4 113 59.3
HPP92_018440 Vanilla planifolia HOM05D005259 ORTHO05D006402 1.5e-27 129.4 748 23.0
SMO205G0008 Selaginella moellendorffii HOM05D007564 ORTHO05D009975 4.1e-25 121.3 334 26.3
SMO276G0057 Selaginella moellendorffii HOM05D007564 ORTHO05D009975 2.1e-24 119.0 406 24.9
SMO111G0058 Selaginella moellendorffii HOM05D007564 ORTHO05D013712 3.5e-24 118.2 316 28.2
SalBow3G4073 Salvia bowleyana HOM05D005259 ORTHO05D006402 7.8e-24 117.1 129 50.4
Ca_09836_v3 Cicer arietinum L. HOM05D005259 ORTHO05D006402 6.6e-23 114.0 699 24.3
Zm00001eb151720 Zea mays HOM05D005259 ORTHO05D006402 9.6e-22 110.2 1011 23.3
Medtr1g075280 Medicago truncatula HOM05D005259 ORTHO05D006402 1.5e-19 102.8 465 26.5
arahy.Tifrunner.gnm1.ann1.YIX0R7 Arachis hypogaea HOM05D005259 ORTHO05D006402 8.4e-18 97.1 466 26.8
arahy.Tifrunner.gnm1.ann1.TEF2FC Arachis hypogaea HOM05D005259 ORTHO05D006402 1.4e-17 96.3 491 26.3
TPR.G17184 Trifolium pratense HOM05D005259 ORTHO05D006402 1.4e-17 96.3 70 61.4
TPR.G27199 Trifolium pratense HOM05D005259 ORTHO05D006402 4.6e-16 91.3 413 27.1
Cc00_g10240 Coffea canephora HOM05D005259 ORTHO05D006402 1.8e-12 79.3 80 50.0
THA.LOC104815984 Tarenaya hassleriana HOM05D005259 ORTHO05D006402 3.1e-12 78.6 313 27.5
Psat4g092760 Pisum sativum HOM05D005259 ORTHO05D006402 3.4e-11 75.1 366 27.3
arahy.Tifrunner.gnm1.ann1.7CP98C Arachis hypogaea HOM05D005259 ORTHO05D006402 1.1e-06 60.1 233 28.8
MBI04_g45851_MAGBIO Magnolia biondii HOM05D005259 ORTHO05D006402 9.6e-06 57.0 394 23.6


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