Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 4.2e-143 511.5 297 100.0
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 3.5e-89 332.4 240 77.5
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 1.0e-88 330.9 247 75.7
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.3e-88 330.5 240 77.5
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 6.7e-88 328.2 243 81.5
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.3e-86 323.9 245 75.1
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 3.4e-84 315.8 241 75.1
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 8.4e-83 311.2 240 70.4
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.4e-82 310.5 235 75.3
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 5.5e-82 308.5 269 68.8
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 5.5e-82 308.5 287 60.3
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.6e-81 307.0 238 80.7
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 6.0e-81 305.1 242 73.1
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 2.3e-80 303.1 241 74.7
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.0e-80 302.8 235 69.4
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 6.7e-80 301.6 295 58.0
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 1.5e-79 300.4 346 52.0
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 5.6e-79 298.5 235 74.9
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.6e-78 297.0 239 78.2
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.8e-78 296.2 225 74.2
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 4.8e-78 295.4 219 73.5
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 5.3e-77 292.0 231 76.6
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 5.3e-77 292.0 249 65.1
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 2.0e-76 290.0 226 72.1
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 2.0e-76 290.0 251 70.1
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 3.4e-76 289.3 295 61.4
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 3.4e-76 289.3 295 61.4
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 3.4e-76 289.3 295 61.4
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 7.6e-76 288.1 250 67.6
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 7.6e-76 288.1 233 70.0
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 1.0e-75 287.7 271 62.7
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.7e-75 287.0 236 77.5
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 3.8e-75 285.8 230 73.5
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 4.9e-75 285.4 236 71.6
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.1e-74 284.3 230 73.0
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.4e-74 283.9 230 73.9
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 5.5e-74 282.0 238 71.4
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 5.5e-74 282.0 231 71.0
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 7.1e-74 281.6 230 72.2
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 7.1e-74 281.6 230 74.3
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 2.7e-73 279.6 237 71.3
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 3.5e-73 279.3 239 65.3
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 7.9e-73 278.1 247 70.0
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 7.9e-73 278.1 240 75.4
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 3.0e-72 276.2 238 73.9
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 5.1e-72 275.4 232 70.3
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.9e-71 273.5 240 67.1
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 3.3e-71 272.7 173 83.8
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 7.4e-71 271.6 239 61.5
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 1.3e-70 270.8 230 73.5
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.6e-70 270.4 221 78.3
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 2.2e-70 270.0 238 73.5
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 3.7e-70 269.2 239 72.0
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.1e-69 266.2 169 81.1
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 2.0e-68 263.5 233 73.4
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 4.5e-68 262.3 227 77.1
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 4.5e-68 262.3 249 62.2
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.3e-67 260.8 238 71.0
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 1.1e-66 257.7 257 66.1
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 1.4e-66 257.3 249 70.7
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 1.9e-66 256.9 280 59.6
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 2.5e-66 256.5 231 67.5
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 2.5e-66 256.5 221 73.3
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 2.5e-66 256.5 246 66.7
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 4.2e-66 255.8 240 67.1
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 4.2e-66 255.8 240 67.1
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 5.5e-66 255.4 269 66.2
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 9.4e-66 254.6 243 66.7
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 2.7e-65 253.1 228 69.3
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 3.6e-65 252.7 232 66.8
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 7.9e-65 251.5 229 69.9
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 7.9e-65 251.5 233 67.0
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.8e-64 250.4 280 58.2
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 1.8e-64 250.4 238 65.1
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 1.5e-63 247.3 253 57.3
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 2.5e-63 246.5 256 56.2
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 2.5e-63 246.5 279 58.8
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 6.3e-62 241.9 165 68.5
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 5.3e-61 238.8 232 69.4
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 2.0e-60 236.9 223 68.6
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 3.4e-60 236.1 197 69.0
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 2.9e-59 233.0 255 50.2
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 8.5e-59 231.5 257 54.5
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 9.4e-58 228.0 248 63.7
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 2.1e-57 226.9 246 59.3
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 6.1e-57 225.3 237 68.8
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.8e-56 223.8 168 75.0
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.1e-55 221.1 207 68.6
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 2.6e-55 219.9 232 67.2
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 7.4e-55 218.4 230 66.5
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 3.7e-54 216.1 295 49.8
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 1.1e-53 214.5 251 59.0
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 1.1e-53 214.5 223 67.7
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 2.9e-51 206.5 255 50.2
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 1.9e-50 203.8 169 65.7
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 5.5e-50 202.2 225 61.3
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 4.7e-49 199.1 214 67.8
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 4.7e-49 199.1 214 67.8
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 6.1e-49 198.7 235 55.3
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 1.4e-48 197.6 197 57.9
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 1.5e-47 194.1 148 79.1
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 6.3e-46 188.7 163 60.7
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 1.7e-43 180.6 230 56.5
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 5.0e-43 179.1 122 68.9
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 4.8e-38 162.5 127 73.2
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 1.8e-37 160.6 144 56.2
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 9.1e-37 158.3 231 53.2
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 5.9e-36 155.6 234 54.7
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 5.5e-34 149.1 111 75.7
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.2e-33 147.9 231 44.2
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 8.3e-30 135.2 267 39.0
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 6.6e-27 125.6 104 58.7
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.8e-24 117.5 103 82.5
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.8e-21 107.5 213 40.8
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 6.8e-16 89.0 103 64.1
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 3.2e-13 80.1 42 83.3
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 2.3e-08 63.9 41 65.9
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 1.2e-07 61.6 41 65.9
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 2.0e-07 60.8 37 70.3
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 2.0e-07 60.8 190 28.9
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 3.4e-07 60.1 86 37.2
FvH4_3g02750 Fragaria vesca HOM05D006314 ORTHO05D007970 1.3e-06 58.2 43 67.4
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 2.2e-06 57.4 46 56.5


User provided reference genes

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