Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 1.7e-157 559.3 290 100.0
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 2.9e-152 542.0 290 94.1
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 4.7e-147 524.6 289 91.7
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 5.2e-146 521.2 288 91.7
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 1.3e-144 516.5 290 88.3
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.7e-144 516.2 288 89.6
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 3.7e-144 515.0 289 91.7
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 4.9e-144 514.6 289 88.6
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 6.4e-144 514.2 290 87.6
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 4.1e-143 511.5 289 87.5
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 5.4e-143 511.1 290 86.9
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 7.1e-143 510.8 289 91.0
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 7.1e-143 510.8 289 87.9
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 9.2e-143 510.4 289 87.9
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 9.2e-143 510.4 289 91.3
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.1e-142 509.2 289 87.5
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 2.7e-142 508.8 289 88.2
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 4.6e-142 508.1 289 87.2
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 7.8e-142 507.3 289 87.5
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 7.8e-142 507.3 289 87.5
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 1.0e-141 506.9 288 88.5
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 1.3e-141 506.5 290 86.2
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.7e-141 506.1 288 90.6
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 2.3e-141 505.8 289 87.2
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 3.9e-141 505.0 288 90.6
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 3.3e-140 501.9 290 84.8
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 3.3e-140 501.9 289 85.5
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 3.3e-140 501.9 289 85.5
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 5.6e-140 501.1 290 84.5
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 5.6e-140 501.1 290 84.8
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 7.3e-140 500.7 289 85.8
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 1.6e-139 499.6 289 84.8
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 1.6e-139 499.6 289 86.5
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 4.7e-139 498.0 291 85.6
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 6.2e-139 497.7 286 85.7
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 8.1e-139 497.3 289 85.1
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 1.4e-138 496.5 289 85.1
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 2.4e-138 495.7 291 85.6
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 4.0e-138 495.0 289 84.1
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 5.2e-138 494.6 290 85.5
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 5.2e-138 494.6 290 85.5
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 5.2e-138 494.6 290 83.8
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 6.8e-138 494.2 290 84.8
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 6.8e-138 494.2 289 85.1
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 8.9e-138 493.8 289 83.4
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 1.2e-137 493.4 289 84.4
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 1.2e-137 493.4 303 86.8
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 1.2e-137 493.4 290 85.2
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 1.5e-137 493.0 289 84.4
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 1.5e-137 493.0 287 86.4
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 3.4e-137 491.9 289 83.7
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 4.4e-137 491.5 290 84.1
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 5.8e-137 491.1 289 83.0
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 7.6e-137 490.7 289 84.4
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 7.6e-137 490.7 289 84.1
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 7.6e-137 490.7 290 83.4
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 9.9e-137 490.3 289 84.1
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 2.2e-136 489.2 289 82.7
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 2.2e-136 489.2 289 82.7
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 2.2e-136 489.2 289 82.7
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 4.9e-136 488.0 289 82.4
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 4.9e-136 488.0 289 82.4
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 6.4e-136 487.6 290 83.8
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 1.1e-135 486.9 289 83.4
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 1.4e-135 486.5 290 83.1
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 2.4e-135 485.7 289 84.4
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 2.4e-135 485.7 302 81.8
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 3.2e-135 485.3 289 84.4
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 4.2e-135 485.0 288 84.4
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 5.4e-135 484.6 289 84.1
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 5.4e-135 484.6 289 83.7
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 7.1e-135 484.2 290 83.4
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 7.1e-135 484.2 289 84.1
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 9.3e-135 483.8 290 82.1
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 1.6e-134 483.0 289 84.1
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 1.6e-134 483.0 287 84.3
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 1.6e-134 483.0 290 83.4
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 2.1e-134 482.6 290 83.8
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 2.7e-134 482.3 290 81.7
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 2.7e-134 482.3 289 83.7
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 4.6e-134 481.5 287 85.4
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 4.6e-134 481.5 287 85.4
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 1.0e-133 480.3 290 81.4
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 1.7e-133 479.6 290 83.8
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 2.3e-133 479.2 287 84.3
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 2.3e-133 479.2 290 83.1
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 3.0e-133 478.8 301 83.4
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 3.0e-133 478.8 287 82.6
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 3.0e-133 478.8 287 85.0
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.0e-133 478.8 293 86.3
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 5.1e-133 478.0 293 86.3
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 1.9e-132 476.1 291 83.8
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 3.3e-132 475.3 290 82.1
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 5.6e-132 474.6 290 82.1
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 7.3e-132 474.2 288 83.7
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 9.6e-132 473.8 289 82.4
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 1.3e-131 473.4 290 80.0
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 1.6e-131 473.0 286 80.8
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 2.8e-131 472.2 290 81.0
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 3.6e-131 471.9 293 82.6
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 3.6e-131 471.9 322 77.0
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 6.2e-131 471.1 290 80.3
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 3.1e-130 468.8 290 80.0
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 2.0e-129 466.1 290 79.3
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 2.6e-129 465.7 287 80.5
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 3.4e-129 465.3 290 79.0
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 4.4e-129 464.9 287 79.1
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 2.2e-128 462.6 294 79.3
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 2.2e-128 462.6 290 79.3
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 2.9e-128 462.2 287 79.1
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 1.4e-127 459.9 290 77.9
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 1.4e-127 459.9 290 77.9
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 2.4e-127 459.1 290 82.8
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 7.1e-127 457.6 287 77.7
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 9.3e-127 457.2 292 80.1
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 4.6e-126 454.9 289 81.7
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 1.0e-125 453.8 290 77.2
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 3.0e-125 452.2 288 78.5
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 6.6e-125 451.1 306 76.1
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 6.2e-123 444.5 289 78.9
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.2e-121 440.3 448 56.7
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.0e-121 439.5 291 78.4
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.6e-121 439.1 291 78.0
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 4.5e-121 438.3 291 78.0
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 4.9e-120 434.9 274 78.8
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 6.4e-120 434.5 261 85.1
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 1.4e-119 433.3 288 77.4
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 2.4e-119 432.6 307 71.3
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 6.0e-118 427.9 309 73.8
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.3e-117 426.8 292 77.4
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 1.3e-117 426.8 287 74.2
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 5.6e-116 421.4 299 74.6
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 3.4e-113 412.1 256 78.9
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 1.1e-111 407.1 232 87.1
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 2.1e-110 402.9 257 78.2
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 4.6e-110 401.7 293 70.0
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 4.3e-108 395.2 294 69.0
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 7.4e-108 394.4 230 84.8
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 9.6e-108 394.0 290 66.9
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 3.7e-107 392.1 290 66.6
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 8.2e-107 391.0 290 66.6
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 2.2e-104 382.9 232 81.5
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 1.4e-103 380.2 298 70.8
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 1.2e-102 377.1 283 64.7
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 3.2e-95 352.4 289 64.4
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 6.5e-88 328.2 203 81.8
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 9.4e-87 324.3 270 66.3
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 3.8e-80 302.4 285 56.5
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 2.2e-75 286.6 287 51.6
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 5.9e-73 278.5 285 51.6
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 6.8e-69 265.0 285 48.4
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 6.3e-67 258.5 281 47.0
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 3.5e-65 252.7 164 75.0
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 5.4e-58 228.8 154 71.4
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 3.8e-56 222.6 113 95.6
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 1.1e-55 221.1 151 76.2
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 2.3e-53 213.4 122 87.7
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 1.9e-23 114.0 77 74.0
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 2.8e-22 110.2 124 48.4
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 8.1e-22 108.6 75 72.0
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 1.4e-21 107.8 152 42.8
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 8.9e-21 105.1 52 94.2
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 1.2e-20 104.8 66 77.3
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 1.2e-20 104.8 79 68.4
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 9.9e-20 101.7 79 67.1
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 3.8e-19 99.8 57 84.2
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 2.4e-18 97.1 79 64.6
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 7.1e-18 95.5 70 68.6
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 1.0e-16 91.7 80 62.5
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 5.6e-15 85.9 58 70.7
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 5.6e-15 85.9 58 70.7
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 2.1e-09 67.4 51 66.7
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 6.7e-08 62.4 46 63.0
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 1.1e-07 61.6 38 78.9
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 4.8e-06 56.2 60 56.7


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