Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 1.5e-222 776.2 494 100.0
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 2.4e-151 539.7 537 64.8
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 4.1e-151 538.9 435 72.4
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 1.2e-150 537.3 483 74.1
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 1.6e-150 537.0 507 67.7
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 1.0e-149 534.3 494 66.6
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 1.5e-148 530.4 505 71.3
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 2.5e-148 529.6 496 67.7
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 4.3e-148 528.9 513 67.3
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 1.6e-147 526.9 495 71.7
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 8.9e-146 521.2 501 68.9
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 1.2e-145 520.8 505 64.4
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 5.8e-145 518.5 434 73.3
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 1.3e-144 517.3 496 67.5
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 2.2e-144 516.5 437 71.9
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 8.3e-144 514.6 496 68.8
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 1.9e-143 513.5 498 65.3
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 1.9e-143 513.5 430 70.2
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 2.7e-142 509.6 435 70.1
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 3.5e-142 509.2 434 70.3
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 1.7e-141 506.9 508 62.6
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 1.7e-141 506.9 437 68.2
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 1.1e-140 504.2 435 69.7
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 1.9e-140 503.4 501 63.3
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 1.9e-140 503.4 401 75.6
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 1.2e-139 500.7 391 75.4
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 1.2e-139 500.7 438 68.3
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 2.8e-139 499.6 401 73.1
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 8.1e-139 498.0 437 70.5
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 8.1e-139 498.0 502 65.5
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 2.4e-138 496.5 505 68.9
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 6.8e-138 495.0 510 65.1
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 8.9e-138 494.6 501 62.9
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 2.0e-137 493.4 422 74.9
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 2.6e-137 493.0 329 77.2
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 3.4e-137 492.7 503 73.0
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 4.9e-136 488.8 409 70.4
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 5.4e-135 485.3 510 66.5
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 7.1e-135 485.0 508 62.2
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 1.6e-134 483.8 429 67.1
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 1.3e-133 480.7 487 58.3
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 5.1e-133 478.8 454 61.2
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 6.6e-133 478.4 435 69.2
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 1.5e-132 477.2 436 67.7
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 1.2e-131 474.2 390 73.6
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 2.8e-131 473.0 422 67.1
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 1.4e-130 470.7 513 58.9
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 2.4e-130 469.9 435 71.3
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 2.0e-129 466.8 433 64.7
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 2.0e-129 466.8 331 73.1
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 5.8e-129 465.3 522 59.2
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.9e-128 463.0 434 65.0
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 6.4e-128 461.8 549 59.4
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 1.4e-127 460.7 521 67.9
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 1.9e-127 460.3 531 63.3
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 3.2e-127 459.5 499 64.5
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 6.0e-126 455.3 390 70.5
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 6.6e-125 451.8 389 69.7
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 8.7e-125 451.4 435 67.1
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 3.3e-124 449.5 519 62.0
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 3.3e-124 449.5 542 61.4
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 5.6e-124 448.7 401 69.8
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 5.6e-124 448.7 292 82.2
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 9.6e-124 448.0 390 68.7
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 1.3e-123 447.6 386 70.7
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 2.8e-123 446.4 364 71.2
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 2.8e-123 446.4 391 68.3
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 3.6e-123 446.0 387 69.8
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 4.8e-123 445.7 298 79.5
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 4.8e-123 445.7 391 68.8
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 6.2e-123 445.3 495 64.6
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 5.3e-122 442.2 441 69.2
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 1.5e-121 440.7 391 68.5
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 7.6e-121 438.3 392 67.1
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 4.9e-120 435.6 418 64.4
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 1.4e-119 434.1 519 64.5
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 9.3e-119 431.4 404 65.8
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 1.0e-117 427.9 301 75.7
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 2.1e-115 420.2 407 62.9
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 1.1e-114 417.9 406 63.3
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 3.1e-114 416.4 522 57.5
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 1.5e-113 414.1 439 59.9
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 1.5e-113 414.1 335 65.4
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 2.2e-112 410.2 308 72.1
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 2.4e-111 406.8 363 63.9
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 3.5e-110 402.9 656 45.0
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 1.0e-109 401.4 500 58.6
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 1.3e-109 401.0 405 62.7
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 6.7e-109 398.7 389 65.6
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 1.5e-108 397.5 389 65.0
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 2.5e-108 396.7 396 61.1
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 6.2e-107 392.1 532 50.0
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 8.2e-107 391.7 271 76.4
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 1.2e-105 387.9 357 71.7
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 4.5e-105 386.0 422 59.2
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 5.8e-105 385.6 390 64.4
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 7.6e-105 385.2 400 62.8
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 1.1e-103 381.3 394 60.2
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 1.1e-103 381.3 394 60.2
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 2.5e-103 380.2 400 62.2
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 9.3e-103 378.3 531 49.2
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 1.2e-102 377.9 290 68.6
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 1.6e-102 377.5 260 78.1
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 2.7e-102 376.7 524 51.0
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 2.5e-95 353.6 284 70.4
GSVIVG01005079001 Vitis vinifera HOM05D005480 ORTHO05D006735 2.1e-94 350.5 297 72.1
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 5.1e-93 345.9 366 57.7
Lalb_Chr05g0213141 Lupinus albus HOM05D005480 ORTHO05D006735 7.4e-92 342.0 257 71.2
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 4.8e-91 339.3 387 55.0
BcaB03g12364 Brassica carinata HOM05D005480 ORTHO05D006735 5.0e-88 329.3 523 44.9
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 4.4e-84 316.2 293 55.3
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 7.7e-81 305.4 344 50.9
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 5.0e-80 302.8 436 49.5
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 4.7e-70 269.6 339 48.4
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.7e-65 253.8 226 60.6
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 1.5e-63 248.1 340 45.0
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 5.5e-63 246.1 410 46.3
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 1.2e-60 238.4 245 56.3
HPP92_016040 Vanilla planifolia HOM05D005480 ORTHO05D006735 7.5e-60 235.7 201 57.2
CBR_g66690 Chara braunii HOM05D005480 ORTHO05D006735 2.8e-51 207.2 362 38.1
Os03g0765400 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 1.4e-50 204.9 311 44.7
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 3.1e-45 187.2 132 75.0
Mapoly0016s0112 Marchantia polymorpha HOM05D005480 ORTHO05D006735 1.6e-38 164.9 341 34.9
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 2.3e-37 161.0 197 55.8
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 1.5e-31 141.7 99 78.8
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 7.3e-31 139.4 99 77.8
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 7.3e-31 139.4 99 77.8
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 3.3e-23 114.0 74 77.0
Cre16.g685217 Chlamydomonas reinhardtii HOM05D005480 ORTHO05D006735 2.1e-14 84.7 300 27.0
Ah.03g144030 Amaranthus hybridus HOM05D005480 ORTHO05D006735 6.2e-14 83.2 143 45.5
C04p28170 Brassica napus HOM05D005480 ORTHO05D006735 1.2e-09 68.9 98 46.9
BolC4t24360H Brassica oleracea HOM05D005480 ORTHO05D006735 1.2e-09 68.9 98 46.9
BcaC02g10502 Brassica carinata HOM05D005480 ORTHO05D006735 1.6e-09 68.6 62 58.1
PRCOL_00002206 Prasinoderma coloniale HOM05D005480 ORTHO05D006735 7.8e-09 66.2 398 25.9
CBR_g66696 Chara braunii HOM05D005480 ORTHO05D006735 7.3e-07 59.7 118 33.9
C04p33290 Brassica napus HOM05D005480 ORTHO05D006735 6.2e-06 56.6 112 40.2


User provided reference genes

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