Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 1.9e-99 365.9 198 100.0
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 4.9e-87 324.7 198 89.9
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 9.0e-81 303.9 198 81.3
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 3.4e-80 302.0 202 80.2
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 5.4e-78 294.7 193 81.3
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 7.1e-78 294.3 191 82.2
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 4.6e-77 291.6 203 80.3
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 4.6e-77 291.6 203 80.3
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 4.6e-77 291.6 203 80.3
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 6.0e-77 291.2 203 80.3
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 1.7e-76 289.7 203 79.8
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 1.5e-75 286.6 203 79.3
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 2.1e-74 282.7 202 77.2
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 1.4e-73 280.0 203 77.3
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 1.8e-73 279.6 200 76.0
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 9.9e-72 273.9 203 75.9
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 1.7e-71 273.1 203 76.4
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 4.9e-71 271.6 203 75.4
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 1.1e-70 270.4 203 73.4
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 1.9e-70 269.6 203 73.4
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 7.1e-70 267.7 203 73.9
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 1.2e-69 266.9 203 74.9
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 2.1e-69 266.2 203 75.4
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 3.5e-69 265.4 199 73.9
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 7.9e-69 264.2 204 76.5
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 1.8e-68 263.1 199 73.9
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 8.7e-68 260.8 195 76.9
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 4.3e-67 258.5 198 73.7
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 1.3e-66 256.9 201 73.1
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 4.8e-66 255.0 205 71.7
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 8.1e-66 254.2 201 71.6
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 2.4e-65 252.7 203 72.9
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 4.0e-65 251.9 202 72.8
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 1.5e-64 250.0 195 70.3
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 2.6e-64 249.2 203 72.4
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 5.8e-64 248.1 197 73.1
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 7.6e-64 247.7 194 72.2
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 2.2e-63 246.1 205 70.2
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 4.9e-63 245.0 200 70.0
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 7.1e-62 241.1 201 71.1
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 9.3e-62 240.7 204 69.6
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 1.2e-61 240.4 202 67.8
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 1.6e-61 240.0 203 69.5
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 2.1e-61 239.6 198 70.2
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 2.7e-61 239.2 205 69.8
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 3.5e-61 238.8 195 71.3
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 7.9e-61 237.7 201 70.1
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 2.3e-60 236.1 205 67.8
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 2.3e-60 236.1 206 67.0
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 5.1e-60 235.0 206 69.9
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 5.1e-60 235.0 206 68.4
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 6.7e-60 234.6 200 67.0
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 1.5e-59 233.4 169 79.3
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 9.6e-59 230.7 205 64.4
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 1.6e-58 229.9 207 66.7
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 1.6e-58 229.9 201 66.2
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 2.1e-58 229.6 207 68.1
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 2.8e-58 229.2 207 66.2
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 3.7e-58 228.8 205 66.3
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 6.3e-58 228.0 199 70.4
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 1.1e-57 227.3 216 64.8
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 1.4e-57 226.9 207 68.1
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 1.8e-57 226.5 204 64.7
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 1.8e-57 226.5 199 68.8
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 3.1e-57 225.7 201 66.7
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 4.1e-57 225.3 202 65.3
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 9.0e-57 224.2 198 68.2
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.5e-56 223.4 202 66.8
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 2.6e-56 222.6 205 65.4
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.5e-56 221.9 202 66.3
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 4.5e-56 221.9 205 64.9
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 5.9e-56 221.5 203 66.0
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 5.9e-56 221.5 203 66.0
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 7.6e-56 221.1 202 65.8
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 7.6e-56 221.1 202 65.8
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 7.6e-56 221.1 214 64.0
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 1.7e-55 219.9 197 68.0
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 2.2e-55 219.5 203 65.0
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 3.8e-55 218.8 203 66.0
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 6.5e-55 218.0 191 62.8
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 1.4e-54 216.9 200 61.0
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 2.5e-54 216.1 202 65.8
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 2.5e-54 216.1 213 61.5
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 2.5e-54 216.1 199 61.8
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 3.2e-54 215.7 199 67.3
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 5.5e-54 214.9 201 64.7
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 7.2e-54 214.5 197 65.5
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 9.3e-54 214.2 203 63.1
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 1.2e-53 213.8 201 65.7
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 1.2e-53 213.8 198 63.1
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 3.5e-53 212.2 200 65.5
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 6.1e-53 211.5 199 65.3
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 7.9e-53 211.1 199 65.3
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 7.9e-53 211.1 203 62.1
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 1.0e-52 210.7 195 64.6
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.3e-52 210.3 205 63.9
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 1.3e-52 210.3 210 61.4
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 1.3e-52 210.3 210 61.4
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 3.0e-52 209.1 211 61.1
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 5.1e-52 208.4 203 62.1
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 1.5e-51 206.8 211 60.2
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 1.9e-51 206.5 207 61.4
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 3.3e-51 205.7 212 61.3
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 4.3e-51 205.3 211 59.7
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 4.3e-51 205.3 211 59.7
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 4.3e-51 205.3 211 59.7
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 7.4e-51 204.5 200 60.5
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 7.4e-51 204.5 204 60.8
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.3e-50 203.8 201 61.2
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 2.2e-50 203.0 214 61.2
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 2.2e-50 203.0 214 61.2
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 2.8e-50 202.6 204 60.3
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 4.8e-50 201.8 211 61.1
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 8.2e-50 201.1 199 63.3
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 1.1e-49 200.7 214 57.9
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 1.8e-49 199.9 203 61.1
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 6.9e-49 198.0 207 58.5
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 9.0e-49 197.6 203 58.1
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 2.6e-48 196.1 206 60.2
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 7.7e-48 194.5 207 57.5
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 1.3e-47 193.7 190 59.5
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 2.9e-47 192.6 198 59.1
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 5.0e-47 191.8 208 57.7
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 1.4e-46 190.3 207 57.0
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 2.5e-46 189.5 201 59.2
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 1.0e-44 184.1 199 58.3
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 6.7e-44 181.4 204 57.8
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 2.0e-43 179.9 202 55.9
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 5.7e-43 178.3 202 58.4
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 2.4e-41 172.9 202 54.5
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 1.5e-40 170.2 175 56.6
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 3.8e-39 165.6 206 48.1
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 7.2e-38 161.4 200 52.5
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 2.1e-37 159.8 200 50.5
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 3.6e-37 159.1 140 61.4
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 1.0e-36 157.5 200 50.5
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 2.3e-36 156.4 119 76.5
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 6.7e-36 154.8 200 50.5
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 2.2e-34 149.8 173 59.5
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 1.6e-32 143.7 115 69.6
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 5.9e-32 141.7 176 51.7
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.9e-30 136.7 143 53.1
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.6e-29 133.7 176 43.2
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 2.3e-28 129.8 205 40.0
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 1.5e-27 127.1 126 59.5
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 2.4e-25 119.8 133 52.6
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 1.2e-24 117.5 147 46.9
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 2.7e-24 116.3 176 42.0
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 5.0e-23 112.1 141 52.5
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.2e-22 109.0 133 51.1
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 9.4e-22 107.8 146 47.3
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 8.8e-20 101.3 140 47.1
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 4.4e-19 99.0 77 67.5
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 9.8e-19 97.8 162 46.3
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 1.4e-17 94.0 161 47.8
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 7.0e-17 91.7 105 53.3
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 7.0e-17 91.7 100 55.0
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 7.7e-16 88.2 121 45.5
Solyc10g077120.3 Solanum lycopersicum HOM05D004549 ORTHO05D005390 1.7e-15 87.0 86 61.6
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 1.1e-09 67.8 140 34.3
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 3.5e-08 62.8 144 37.5


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