Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G011600 Manihot esculenta HOM05D003724 ORTHO05D004367 1.7e-191 672.5 344 100.0
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 9.9e-160 567.0 339 83.2
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 2.2e-159 565.8 339 84.4
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 1.1e-158 563.5 339 83.2
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 5.4e-158 561.2 339 82.6
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 9.2e-158 560.5 348 81.6
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 2.1e-157 559.3 341 83.3
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.7e-157 558.9 347 81.6
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 1.7e-156 556.2 348 80.5
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 1.9e-155 552.7 339 83.2
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 3.3e-155 552.0 339 83.8
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 7.3e-155 550.8 348 82.5
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 7.3e-155 550.8 348 80.5
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 2.8e-154 548.9 339 82.0
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 6.2e-154 547.7 339 82.6
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 8.1e-154 547.4 339 82.0
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 1.1e-153 547.0 339 82.0
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 3.1e-153 545.4 345 81.4
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 5.2e-153 544.7 339 80.2
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 5.2e-153 544.7 339 81.4
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 8.9e-153 543.9 377 75.3
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.2e-152 543.5 339 82.6
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 2.0e-152 542.7 336 81.0
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 3.4e-152 542.0 350 79.4
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 2.9e-151 538.9 341 80.6
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 5.4e-150 534.6 339 80.8
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 2.1e-149 532.7 340 80.3
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 3.0e-148 528.9 339 79.6
CAN.G804.4 Capsicum annuum HOM05D003724 ORTHO05D004367 4.3e-147 525.0 338 78.7
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 5.6e-147 524.6 338 78.4
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 7.3e-147 524.2 339 79.1
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 7.3e-147 524.2 339 79.1
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 1.6e-146 523.1 341 77.1
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 1.6e-146 523.1 347 78.4
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 1.6e-146 523.1 339 78.8
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 3.6e-146 521.9 339 79.1
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 4.8e-146 521.5 345 78.0
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 6.2e-146 521.2 338 78.4
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 1.4e-145 520.0 339 78.2
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 1.8e-145 519.6 349 77.7
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 3.1e-145 518.8 337 78.6
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 3.1e-145 518.8 340 77.9
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 4.0e-145 518.5 339 78.5
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 5.3e-145 518.1 338 81.4
CSS0039632 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.5e-144 516.5 319 81.2
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 4.4e-144 515.0 339 76.4
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 7.6e-144 514.2 343 77.3
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 7.6e-144 514.2 336 78.0
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 9.9e-144 513.8 343 76.4
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 1.3e-143 513.5 341 78.0
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 1.7e-143 513.1 339 77.0
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 6.4e-143 511.1 339 75.8
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 8.4e-143 510.8 343 76.1
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 8.4e-143 510.8 339 76.7
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 1.1e-142 510.4 320 80.9
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 3.2e-142 508.8 342 75.7
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 5.4e-142 508.1 336 75.0
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 1.2e-141 506.9 343 75.8
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 1.6e-141 506.5 343 75.8
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 4.6e-141 505.0 339 77.6
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 3.0e-140 502.3 339 74.6
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 3.0e-140 502.3 343 75.5
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 3.9e-140 501.9 337 77.4
vmacro01062 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.9e-139 499.6 336 76.8
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 5.6e-139 498.0 347 74.1
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 7.3e-139 497.7 339 77.3
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 7.3e-139 497.7 339 76.7
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 1.3e-138 496.9 342 76.3
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 1.6e-138 496.5 339 74.6
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 2.1e-138 496.1 341 76.0
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 2.1e-138 496.1 339 73.7
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 3.6e-138 495.4 339 74.0
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 1.4e-137 493.4 338 74.0
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 2.4e-137 492.7 338 73.7
BcaB03g15202 Brassica carinata HOM05D003724 ORTHO05D004367 3.1e-137 492.3 335 74.3
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 3.1e-137 492.3 376 69.9
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 6.9e-137 491.1 343 75.5
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 1.2e-136 490.3 340 72.9
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 2.0e-136 489.6 338 73.4
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 2.6e-136 489.2 320 77.2
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 2.9e-135 485.7 337 73.3
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 4.9e-135 485.0 339 75.8
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.1e-134 483.8 338 74.9
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 7.9e-133 477.6 364 71.4
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 5.1e-132 474.9 339 73.2
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 9.6e-131 470.7 352 71.6
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 1.3e-130 470.3 339 72.9
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 4.8e-130 468.4 340 71.8
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 1.8e-129 466.5 369 69.4
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 7.6e-128 461.1 341 69.5
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 4.9e-127 458.4 319 75.2
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 4.6e-125 451.8 339 69.9
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 1.5e-123 446.8 338 69.2
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 5.7e-123 444.9 357 67.2
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 6.2e-122 441.4 318 73.3
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 3.1e-121 439.1 337 68.5
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 9.0e-121 437.6 320 70.9
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 9.0e-121 437.6 286 77.6
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 3.4e-120 435.6 339 69.0
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 3.2e-118 429.1 286 74.5
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 5.5e-118 428.3 315 71.7
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 5.5e-118 428.3 286 75.9
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 9.3e-118 427.6 310 73.5
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 5.5e-110 401.7 337 63.5
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 3.3e-107 392.5 286 71.7
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 7.4e-107 391.3 308 69.2
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 6.3e-106 388.3 267 74.2
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.0e-103 380.9 358 60.3
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 1.6e-101 373.6 250 77.2
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 3.9e-100 369.0 276 70.7
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 1.5e-99 367.1 248 73.8
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 1.4e-97 360.5 338 59.8
FAN12G2603 Fragaria x ananassa HOM05D003724 ORTHO05D004367 9.4e-94 347.8 322 62.7
CARHR058050 Cardamine hirsuta HOM05D003724 ORTHO05D004367 2.3e-92 343.2 278 65.8
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 1.2e-88 330.9 351 51.6
DCAR_026466 Daucus carota HOM05D003724 ORTHO05D004367 2.2e-87 326.6 196 85.2
SHI17968 Sapria himalayana HOM05D003724 ORTHO05D004367 6.5e-87 325.1 230 73.0
MBI06_g32743_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 2.5e-86 323.2 326 57.4
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 4.2e-86 322.4 346 56.9
PSO339G0625 Papaver somniferum HOM05D003724 ORTHO05D004367 1.2e-85 320.9 362 51.7
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 2.8e-82 309.7 239 67.8
CBR_g17956 Chara braunii HOM05D003724 ORTHO05D004367 4.7e-77 292.4 377 46.2
Mapoly0003s0194 Marchantia polymorpha HOM05D003724 ORTHO05D004367 1.2e-75 287.7 347 50.7
SMO116G0148 Selaginella moellendorffii HOM05D003724 ORTHO05D004367 3.3e-70 269.6 226 59.3
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 1.0e-68 264.6 244 58.2
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 3.7e-66 256.1 341 48.7
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.7e-64 250.0 228 60.1
Solyc05g015370.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.2e-61 241.1 208 63.0
PSO170G4962 Papaver somniferum HOM05D003724 ORTHO05D004367 4.1e-57 226.1 188 63.8
Os12g0606600 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 2.7e-48 196.8 282 44.7
COL.COLO4_20397 Corchorus olitorius HOM05D003724 ORTHO05D004367 6.0e-48 195.7 149 71.1
Pp3c5_4780 Physcomitrium patens HOM05D003724 ORTHO05D004367 2.3e-47 193.7 440 34.1
PSO832G0175 Papaver somniferum HOM05D003724 ORTHO05D004367 3.0e-47 193.4 119 79.8
Sopen05g010640 Solanum pennellii HOM05D003724 ORTHO05D004367 3.0e-47 193.4 106 90.6
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 8.9e-44 181.8 126 75.4
Cre10.g452550 Chlamydomonas reinhardtii HOM05D003724 ORTHO05D004367 4.1e-41 172.9 272 41.2
Solyc05g015360.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.7e-39 167.5 110 76.4
Nitab4.5_0002119g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 5.8e-35 152.5 237 40.1
GSVIVG01010478001 Vitis vinifera HOM05D003724 ORTHO05D004367 3.5e-32 143.3 75 96.0
RcHm_v2.0_Chr4g0430331 Rosa chinensis HOM05D003724 ORTHO05D004367 6.0e-32 142.5 75 96.0
Hma1.2p1_0200F.1_g085970 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 7.8e-32 142.1 319 34.5
Glyma.11G250351 Glycine max HOM05D003724 ORTHO05D004367 1.0e-31 141.7 81 90.1
SHI17966 Sapria himalayana HOM05D003724 ORTHO05D004367 2.0e-27 127.5 126 59.5
Nitab4.5_0000767g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.7e-26 124.4 141 50.4
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 2.2e-26 124.0 316 35.4
Lsat_1_v5_gn_3_110541 Lactuca sativa HOM05D003724 ORTHO05D004367 4.2e-25 119.8 120 55.0
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 1.9e-22 110.9 317 30.6
Os01g0165800 Oryza sativa ssp. japonica HOM05D020709 ORTHO05D004367 2.1e-21 107.5 133 41.4
TPR.G40282 Trifolium pratense HOM05D003724 ORTHO05D004367 1.8e-20 104.4 122 50.8
PRCOL_00002813 Prasinoderma coloniale HOM05D003724 ORTHO05D004367 2.4e-20 104.0 264 30.7
vmacro18929 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 2.6e-19 100.5 150 38.0
PSO063G4593 Papaver somniferum HOM05D003724 ORTHO05D004367 2.9e-18 97.1 77 62.3
Lj3g0010411 Lotus japonicus HOM05D003724 ORTHO05D004367 6.9e-12 75.9 107 46.7
PSO782G0388 Papaver somniferum HOM05D003724 ORTHO05D004367 7.1e-09 65.9 45 68.9
SHI18623 Sapria himalayana HOM05D003724 ORTHO05D004367 3.0e-07 60.5 54 57.4
QL06p013707 Quercus lobata HOM05D003724 ORTHO05D000062 6.7e-07 59.3 38 86.8
BcaB05g22759 Brassica carinata HOM05D003724 ORTHO05D096380 8.7e-07 58.9 36 72.2
QL10p034497 Quercus lobata HOM05D003724 ORTHO05D004367 1.9e-06 57.8 38 84.2
PSO561G0043 Papaver somniferum HOM05D003724 ORTHO05D004367 5.7e-06 56.2 93 45.2
Ca_24313_v3 Cicer arietinum L. HOM05D000703 ORTHO05D004367 7.4e-06 55.8 54 51.9


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