Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G002900 Manihot esculenta HOM05D015295 ORTHO05D009969 7.2e-84 313.9 165 100.0
Manes.12G002901 Manihot esculenta HOM05D015295 ORTHO05D004325 5.9e-78 294.3 165 90.3
Manes.12G002600 Manihot esculenta HOM05D015295 ORTHO05D009969 9.4e-76 287.0 160 96.2
Sabra08G0013600 Salix brachista HOM05D015295 ORTHO05D009969 3.1e-18 95.9 127 42.5
Potri.008G020300 Populus trichocarpa HOM05D015295 ORTHO05D009969 4.0e-18 95.5 139 38.8
Sabra10G0187100 Salix brachista HOM05D015295 ORTHO05D009969 1.5e-17 93.6 130 40.8
Potri.010G238900 Populus trichocarpa HOM05D015295 ORTHO05D009969 9.9e-17 90.9 124 40.3
Cpa.g.sc365.3 Carica papaya HOM05D006887 ORTHO05D009969 9.3e-15 84.3 137 38.7
Atru.chr6.1689 Acer truncatum HOM05D006887 ORTHO05D009969 2.3e-13 79.7 159 35.2
TAR365G0201 Trochodendron aralioides HOM05D000307 ORTHO05D000166 8.7e-13 77.8 134 38.1
Haze_14940 Corylus avellana HOM05D006887 ORTHO05D009969 1.5e-12 77.0 85 50.6
Cfa007171 Carpinus fangiana HOM05D006887 ORTHO05D009969 7.4e-12 74.7 85 47.1
Sabra01G0168300 Salix brachista HOM05D006887 ORTHO05D004325 1.6e-11 73.6 142 31.0
Manes.10G129900 Manihot esculenta HOM05D006887 ORTHO05D004325 8.1e-11 71.2 133 36.1
Potri.004G222200 Populus trichocarpa HOM05D006887 ORTHO05D009969 8.1e-11 71.2 133 32.3
CARHR094030 Cardamine hirsuta HOM05D006887 ORTHO05D004325 1.4e-10 70.5 145 31.0
Haze_01459 Corylus avellana HOM05D006887 ORTHO05D009969 4.0e-10 68.9 141 34.0
MBI10_g35440_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 5.3e-10 68.6 142 33.8
Potri.015G077800 Populus trichocarpa HOM05D006887 ORTHO05D009969 5.3e-10 68.6 154 31.2
MBI10_g26051_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 6.9e-10 68.2 140 33.6
BcaC09g48822 Brassica carinata HOM05D006887 ORTHO05D004325 9.0e-10 67.8 144 32.6
C01p45590 Brassica napus HOM05D006887 ORTHO05D004325 9.0e-10 67.8 144 32.6
BolC1t04520H Brassica oleracea HOM05D006887 ORTHO05D004325 9.0e-10 67.8 144 32.6
FAN04G1442 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.2e-09 67.4 146 33.6
BraA01t03660Z Brassica rapa HOM05D006887 ORTHO05D004325 1.5e-09 67.0 144 33.3
MBI16_g16368_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 1.5e-09 67.0 142 32.4
Lalb_Chr23g0265491 Lupinus albus HOM05D000307 ORTHO05D000166 2.0e-09 66.6 139 33.1
MBI16_g19061_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 2.0e-09 66.6 141 32.6
BcaB06g25916 Brassica carinata HOM05D006887 ORTHO05D004325 2.6e-09 66.2 146 32.9
A01p35810 Brassica napus HOM05D006887 ORTHO05D004325 3.4e-09 65.9 140 30.7
Sp3g16720 Schrenkiella parvula HOM05D006887 ORTHO05D004325 3.4e-09 65.9 139 29.5
ATR0626G033 Amborella trichopoda HOM05D000307 ORTHO05D000166 4.5e-09 65.5 135 32.6
BcaC05g28586 Brassica carinata HOM05D006887 ORTHO05D004325 4.5e-09 65.5 146 28.8
BolC5t33421H Brassica oleracea HOM05D006887 ORTHO05D004325 4.5e-09 65.5 146 28.8
MBI16_g19060_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 4.5e-09 65.5 137 31.4
BcaB04g18996 Brassica carinata HOM05D006887 ORTHO05D004325 5.8e-09 65.1 144 32.6
Cfa015195 Carpinus fangiana HOM05D006887 ORTHO05D009969 5.8e-09 65.1 143 32.9
Sabra10G0139000 Salix brachista HOM05D001295 ORTHO05D050580 7.6e-09 64.7 130 33.1
MBI09_g18620_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 1.0e-08 64.3 149 27.5
ATR0605G195 Amborella trichopoda HOM05D000307 ORTHO05D000166 1.3e-08 63.9 142 30.3
AL3G31960 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 1.3e-08 63.9 133 32.3
FAN13G0405 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.3e-08 63.9 158 34.2
Prupe.7G032000 Prunus persica HOM05D000307 ORTHO05D000166 1.3e-08 63.9 178 29.2
Sabra15G0102400 Salix brachista HOM05D006887 ORTHO05D009969 1.7e-08 63.5 140 31.4
MBI16_g16371_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 2.2e-08 63.2 137 30.7
THA.LOC104801507 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 2.2e-08 63.2 58 48.3
Potri.010G181300 Populus trichocarpa HOM05D015295 ORTHO05D050580 2.9e-08 62.8 130 32.3
Prupe.7G031800 Prunus persica HOM05D000307 ORTHO05D000166 2.9e-08 62.8 178 28.7
BcaB04g20759 Brassica carinata HOM05D006887 ORTHO05D004325 3.8e-08 62.4 164 28.0
FvH4_5g27070 Fragaria vesca HOM05D016120 ORTHO05D013324 3.8e-08 62.4 158 34.2
FAN08G0332 Fragaria x ananassa HOM05D016120 ORTHO05D013324 3.8e-08 62.4 151 34.4
FAN18G0925 Fragaria x ananassa HOM05D016120 ORTHO05D013324 3.8e-08 62.4 158 34.2
Lalb_Chr05g0223381 Lupinus albus HOM05D000307 ORTHO05D000166 3.8e-08 62.4 141 32.6
MBI10_g35438_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 3.8e-08 62.4 136 30.1
CSS0012311 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 4.9e-08 62.0 153 29.4
Carub.0003s1843 Capsella rubella HOM05D006887 ORTHO05D004325 6.5e-08 61.6 135 32.6
arahy.Tifrunner.gnm1.ann1.P24S13 Arachis hypogaea HOM05D000307 ORTHO05D000166 8.4e-08 61.2 142 33.8
MBI07_g09577_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 8.4e-08 61.2 138 30.4
Prupe.7G030800 Prunus persica HOM05D000307 ORTHO05D000166 8.4e-08 61.2 167 34.7
Thhalv10005313m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.1e-07 60.8 147 28.6
Prupe.7G030200 Prunus persica HOM05D000307 ORTHO05D000166 1.1e-07 60.8 117 34.2
BraA05t21939Z Brassica rapa HOM05D006887 ORTHO05D004325 1.9e-07 60.1 150 27.3
Cpa.g.sc25.11 Carica papaya HOM05D063200 ORTHO05D009969 1.9e-07 60.1 143 31.5
Dinv15101 Davidia involucrata HOM05D000307 ORTHO05D000166 2.5e-07 59.7 142 32.4
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 3.2e-07 59.3 67 41.8
AT3G18650 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 3.2e-07 59.3 146 30.8
Peaxi162Scf00076g01010 Petunia axillaris HOM05D000307 ORTHO05D000166 3.2e-07 59.3 146 31.5
FAN27G3405 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.2e-07 58.9 144 31.2
MBI10_g26049_MAGBIO Magnolia biondii HOM05D000307 ORTHO05D000166 4.2e-07 58.9 125 33.6
THA.LOC109116042 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 4.2e-07 58.9 131 32.8
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 5.5e-07 58.5 83 41.0
THA.LOC104805962 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 5.5e-07 58.5 148 29.1
THA.LOC109116041 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 7.1e-07 58.2 131 32.8
AT5G65330 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 9.3e-07 57.8 144 29.9
Dinv29104 Davidia involucrata HOM05D000307 ORTHO05D000166 9.3e-07 57.8 144 28.5
FAN22G2097 Fragaria x ananassa HOM05D016120 ORTHO05D013324 9.3e-07 57.8 170 34.7
Gohir.D11G185000 Gossypium hirsutum HOM05D000307 ORTHO05D000166 9.3e-07 57.8 141 30.5
Gorai.007G196600 Gossypium raimondii HOM05D000307 ORTHO05D000166 9.3e-07 57.8 141 30.5
Nitab4.5_0007355g0010 Nicotiana tabacum HOM05D000307 ORTHO05D000166 9.3e-07 57.8 157 29.3
Rhsim08G0003700 Rhododendron simsii HOM05D000307 ORTHO05D000166 9.3e-07 57.8 143 30.1
C02p64040 Brassica napus HOM05D006887 ORTHO05D004325 1.2e-06 57.4 161 27.3
BolC2t12470H Brassica oleracea HOM05D006887 ORTHO05D004325 1.2e-06 57.4 161 27.3
Duzib264G0859 Durio zibethinus HOM05D000307 ORTHO05D000166 1.2e-06 57.4 140 30.7
FvH4_2g27520 Fragaria vesca HOM05D000307 ORTHO05D000166 1.2e-06 57.4 175 29.1
FAN15G0593 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.2e-06 57.4 175 29.1
FAN24G2406 Fragaria x ananassa HOM05D000307 ORTHO05D000166 1.2e-06 57.4 175 29.1
MBI03_g17862_MAGBIO Magnolia biondii HOM05D032750 ORTHO05D000166 1.2e-06 57.4 138 26.1
Oeu046900.1 Olea europaea HOM05D000307 ORTHO05D000166 1.2e-06 57.4 146 29.5
CANSAT80G0747 Cannabis sativa HOM05D015295 ORTHO05D043380 1.6e-06 57.0 136 27.9
Cpa.g.sc25.27 Carica papaya HOM05D063200 ORTHO05D009969 1.6e-06 57.0 143 30.8
FAN12G1561 Fragaria x ananassa HOM05D016120 ORTHO05D013324 1.6e-06 57.0 163 33.7
Oeu048605.1 Olea europaea HOM05D041624 ORTHO05D009969 1.6e-06 57.0 98 37.8
Oeu048608.1 Olea europaea HOM05D041624 ORTHO05D009969 1.6e-06 57.0 98 37.8
SGA_v2.0_scaffold58G20582 Striga asiatica HOM05D000370 ORTHO05D000166 1.6e-06 57.0 141 29.8
BcaC03g18328 Brassica carinata HOM05D006887 ORTHO05D004325 2.1e-06 56.6 161 27.3
FvH4_4g07700 Fragaria vesca HOM05D016120 ORTHO05D013324 2.1e-06 56.6 163 33.7
Oeu061769.1 Olea europaea HOM05D000307 ORTHO05D000166 2.1e-06 56.6 146 28.8
SEGI_05719 Sequoiadendron giganteum HOM05D066287 ORTHO05D000166 2.1e-06 56.6 144 28.5
THA.LOC104804829 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 2.1e-06 56.6 133 32.3
Cpa.g.sc192.10 Carica papaya HOM05D006887 ORTHO05D004325 2.7e-06 56.2 132 32.6
CsaV3_2G019470 Cucumis sativus L. HOM05D000307 ORTHO05D000166 2.7e-06 56.2 141 28.4
FAN20G0315 Fragaria x ananassa HOM05D000307 ORTHO05D000166 2.7e-06 56.2 143 30.8
Gohir.A11G177200 Gossypium hirsutum HOM05D000307 ORTHO05D000166 2.7e-06 56.2 141 29.8
Sp5g22080 Schrenkiella parvula HOM05D007946 ORTHO05D004325 2.7e-06 56.2 40 55.0
Dinv30482 Davidia involucrata HOM05D009853 ORTHO05D009969 3.5e-06 55.8 63 47.6
Nitab4.5_0000365g0070 Nicotiana tabacum HOM05D000307 ORTHO05D000166 3.5e-06 55.8 133 28.6
Sed0006669 Sechium edule HOM05D000307 ORTHO05D000166 3.5e-06 55.8 140 28.6
TPR.G26403 Trifolium pratense HOM05D008089 ORTHO05D000166 3.5e-06 55.8 144 31.9
Actinidia20182 Actinidia chinensis HOM05D011412 ORTHO05D009969 4.6e-06 55.5 55 45.5
CSS0019303 Camellia sinensis var. sinensis HOM05D009853 ORTHO05D009969 4.6e-06 55.5 55 40.0
Lj1C1007T16 Lonicera japonica HOM05D000307 ORTHO05D000166 4.6e-06 55.5 137 31.4
Medtr7g011950 Medicago truncatula HOM05D000307 ORTHO05D000166 4.6e-06 55.5 153 23.5
PGR042G3771 Punica granatum HOM05D000307 ORTHO05D000166 4.6e-06 55.5 150 29.3
Solyc11g020660.1 Solanum lycopersicum HOM05D000307 ORTHO05D000166 4.6e-06 55.5 132 25.8
BraA04t16949Z Brassica rapa HOM05D006887 ORTHO05D004325 6.0e-06 55.1 143 28.7
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 6.0e-06 55.1 82 39.0
Oeu061767.1 Olea europaea HOM05D000307 ORTHO05D000166 6.0e-06 55.1 146 28.8
Sopen11g010690 Solanum pennellii HOM05D000307 ORTHO05D000166 6.0e-06 55.1 152 25.7
THA.LOC104801949 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 6.0e-06 55.1 79 39.2
THA.LOC104801951 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 6.0e-06 55.1 79 39.2
THA.LOC104825360 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 6.0e-06 55.1 79 39.2
Aqoxy5G00368 Aquilegia oxysepala HOM05D000307 ORTHO05D000166 7.9e-06 54.7 86 39.5
A04p12980 Brassica napus HOM05D006887 ORTHO05D004325 7.9e-06 54.7 141 28.4
CDE02G2624 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 7.9e-06 54.7 61 45.9
Ca_13731_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 7.9e-06 54.7 141 30.5
QL10p050899 Quercus lobata HOM05D006887 ORTHO05D009969 7.9e-06 54.7 55 43.6
Sc04g0008670 Simmondsia chinensis HOM05D000307 ORTHO05D000166 7.9e-06 54.7 129 27.9
Thecc.01G021900 Theobroma cacao HOM05D000307 ORTHO05D000166 7.9e-06 54.7 141 30.5


User provided reference genes

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