Gene: Solyc11g020660.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g020660.1
  • Transcript Identifier Solyc11g020660.1.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 11886900-11887838 : negative

Gene Family Information

  • ID HOM05D000307
  • #Genes/#Species 1483/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g020660.1.1
  • uniprot A0A3Q7ITU5
  • gene_id Solyc11g020660

Descriptions

  • Description MADS-box transcription factor (AHRD V3.3 *-* A0A2K3LJI2_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0045944
ISO
PLAZA Homology (enrichment)positive regulation of transcription by RNA polymerase II HOM05D000307

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000987
ISO
PLAZA Homology (enrichment)cis-regulatory region sequence-specific DNA binding HOM05D000307

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002100 Transcription factor, MADS-box
IPR036879 Transcription factor, MADS-box superfamily
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)