Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G053150 Manihot esculenta HOM05D003509 ORTHO05D004205 4.2e-98 361.3 174 100.0
Manes.11G075250 Manihot esculenta HOM05D003509 ORTHO05D004205 4.2e-98 361.3 174 100.0
Manes.01G024001 Manihot esculenta HOM05D003509 ORTHO05D004205 5.4e-98 360.9 174 99.4
Manes.06G027900 Manihot esculenta HOM05D003509 ORTHO05D004205 9.0e-93 343.6 169 98.2
Thecc.01G102500 Theobroma cacao HOM05D003509 ORTHO05D004205 2.7e-89 332.0 169 94.1
Ciclev10024720m.g Citrus clementina HOM05D003509 ORTHO05D004205 3.5e-89 331.6 169 92.3
Gohir.A11G201000 Gossypium hirsutum HOM05D003509 ORTHO05D004205 3.5e-89 331.6 169 93.5
Gohir.D11G222000 Gossypium hirsutum HOM05D003509 ORTHO05D004205 6.0e-89 330.9 169 93.5
Gorai.007G239200 Gossypium raimondii HOM05D003509 ORTHO05D004205 1.3e-88 329.7 169 93.5
PGR102G2959 Punica granatum HOM05D003509 ORTHO05D004205 3.0e-88 328.6 169 92.3
COL.COLO4_09956 Corchorus olitorius HOM05D003509 ORTHO05D004205 3.9e-88 328.2 169 92.9
CiPaw.03G141400 Carya illinoinensis HOM05D003509 ORTHO05D004205 8.7e-88 327.0 169 91.1
Gohir.A12G087500 Gossypium hirsutum HOM05D003509 ORTHO05D004205 1.1e-87 326.6 169 92.3
Gohir.D12G085800 Gossypium hirsutum HOM05D003509 ORTHO05D004205 1.1e-87 326.6 169 92.3
Gorai.008G096100 Gossypium raimondii HOM05D003509 ORTHO05D004205 1.1e-87 326.6 169 92.3
AUR62024498 Chenopodium quinoa HOM05D003509 ORTHO05D004205 1.5e-87 326.2 169 91.7
Cc07_g15310 Coffea canephora HOM05D003509 ORTHO05D004205 1.5e-87 326.2 169 91.1
Duzib147G0762 Durio zibethinus HOM05D003509 ORTHO05D004205 1.9e-87 325.9 169 91.7
MD02G1255200 Malus domestica HOM05D003509 ORTHO05D004205 1.9e-87 325.9 169 88.8
CSS0014940 Camellia sinensis var. sinensis HOM05D003509 ORTHO05D004205 2.5e-87 325.5 169 89.9
CANSAT54G2466 Cannabis sativa HOM05D003509 ORTHO05D004205 2.5e-87 325.5 169 89.9
Cpa.g.c44160 Carica papaya HOM05D003509 ORTHO05D004205 2.5e-87 325.5 169 90.5
Hund19140 Selenicereus undatus HOM05D003509 ORTHO05D004205 3.3e-87 325.1 169 90.5
AUR62026083 Chenopodium quinoa HOM05D003509 ORTHO05D004205 5.6e-87 324.3 169 91.7
Potri.005G076200 Populus trichocarpa HOM05D003509 ORTHO05D004205 5.6e-87 324.3 172 89.0
QL06p049655 Quercus lobata HOM05D003509 ORTHO05D004205 5.6e-87 324.3 169 89.9
TAR628G0828 Trochodendron aralioides HOM05D003509 ORTHO05D004205 5.6e-87 324.3 169 89.3
DCAR_003505 Daucus carota HOM05D003509 ORTHO05D004205 7.4e-87 323.9 169 89.9
CiPaw.04G098900 Carya illinoinensis HOM05D003509 ORTHO05D004205 9.6e-87 323.6 169 89.9
Ah.03g141700 Amaranthus hybridus HOM05D003509 ORTHO05D004205 1.3e-86 323.2 169 89.9
arahy.Tifrunner.gnm1.ann1.R7GNZQ Arachis hypogaea HOM05D003509 ORTHO05D004205 1.3e-86 323.2 169 89.3
arahy.Tifrunner.gnm1.ann1.Y9QREV Arachis hypogaea HOM05D003509 ORTHO05D004205 1.3e-86 323.2 169 89.3
MD07G1066800 Malus domestica HOM05D003509 ORTHO05D004205 1.3e-86 323.2 169 88.2
Oeu002402.1 Olea europaea HOM05D003509 ORTHO05D004205 1.3e-86 323.2 169 89.3
Sabra05G0062800 Salix brachista HOM05D003509 ORTHO05D004205 1.3e-86 323.2 172 88.4
vmacro12953 Vaccinium macrocarpon HOM05D003509 ORTHO05D004205 1.3e-86 323.2 169 89.9
Nn4g24883 Nelumbo nucifera HOM05D003509 ORTHO05D004205 2.8e-86 322.0 169 90.5
TWI74G1477 Tripterygium wilfordii HOM05D003509 ORTHO05D004205 2.8e-86 322.0 169 89.9
Actinidia36591 Actinidia chinensis HOM05D003509 ORTHO05D004205 4.8e-86 321.2 169 88.8
Dinv16288 Davidia involucrata HOM05D003509 ORTHO05D004205 4.8e-86 321.2 169 89.3
Eucgr.H04794 Eucalyptus grandis HOM05D003509 ORTHO05D004205 4.8e-86 321.2 169 88.8
THA.LOC104807697 Tarenaya hassleriana HOM05D003509 ORTHO05D004205 4.8e-86 321.2 169 89.9
Aa31LG6G15420 Aethionema arabicum HOM05D003509 ORTHO05D004205 6.2e-86 320.9 169 89.3
FAN28G0272 Fragaria x ananassa HOM05D003509 ORTHO05D004205 6.2e-86 320.9 169 88.8
Ca_16534_v3 Cicer arietinum L. HOM05D003509 ORTHO05D004205 8.1e-86 320.5 169 88.8
Lj4A888G17 Lonicera japonica HOM05D003509 ORTHO05D004205 8.1e-86 320.5 169 88.2
FvH4_1g25840 Fragaria vesca HOM05D003509 ORTHO05D004205 1.1e-85 320.1 169 88.8
FAN19G1703 Fragaria x ananassa HOM05D003509 ORTHO05D004205 1.1e-85 320.1 169 88.8
Lalb_Chr11g0075361 Lupinus albus HOM05D003509 ORTHO05D004205 1.1e-85 320.1 169 88.2
Glyma.05G178900 Glycine max HOM05D003509 ORTHO05D004205 1.4e-85 319.7 169 88.8
Sc13g0001620 Simmondsia chinensis HOM05D003509 ORTHO05D004205 1.4e-85 319.7 169 88.2
Lalb_Chr23g0277341 Lupinus albus HOM05D003509 ORTHO05D004205 1.8e-85 319.3 169 87.0
Manes.12G135600 Manihot esculenta HOM05D003509 ORTHO05D004205 1.8e-85 319.3 169 88.8
Sabra07G0075800 Salix brachista HOM05D003509 ORTHO05D004205 1.8e-85 319.3 172 86.6
FAN23G1356 Fragaria x ananassa HOM05D003509 ORTHO05D004205 2.4e-85 318.9 169 88.2
CARHR246850 Cardamine hirsuta HOM05D003509 ORTHO05D004205 3.1e-85 318.5 169 88.8
A08p23300 Brassica napus HOM05D003509 ORTHO05D004205 4.0e-85 318.2 169 88.8
BraA08t34285Z Brassica rapa HOM05D003509 ORTHO05D004205 4.0e-85 318.2 169 88.8
Prupe.2G084100 Prunus persica HOM05D003509 ORTHO05D004205 4.0e-85 318.2 169 87.0
Ah.02g124690 Amaranthus hybridus HOM05D003509 ORTHO05D004205 6.9e-85 317.4 169 88.2
Dinv21913 Davidia involucrata HOM05D003509 ORTHO05D004205 6.9e-85 317.4 169 88.8
TPR.G17853 Trifolium pratense HOM05D003509 ORTHO05D004205 9.0e-85 317.0 169 88.2
Duzib264G1109 Durio zibethinus HOM05D003509 ORTHO05D004205 1.2e-84 316.6 169 89.9
Glyma.08G136400 Glycine max HOM05D003509 ORTHO05D004205 1.2e-84 316.6 169 88.2
VMungo1383G3521 Vigna mungo HOM05D003509 ORTHO05D004205 1.2e-84 316.6 169 87.6
Atru.chr4.74 Acer truncatum HOM05D003509 ORTHO05D004205 1.5e-84 316.2 169 88.2
Carub.0007s0178 Capsella rubella HOM05D003509 ORTHO05D004205 2.0e-84 315.8 169 88.8
Haze_24942 Corylus avellana HOM05D003509 ORTHO05D004205 2.0e-84 315.8 169 87.0
Migut.L00116 Erythranthe guttata HOM05D003509 ORTHO05D004205 2.0e-84 315.8 169 87.0
Thhalv10024225m.g Eutrema salsugineum HOM05D003509 ORTHO05D004205 2.0e-84 315.8 169 88.8
Medtr3g087350 Medicago truncatula HOM05D003509 ORTHO05D004205 2.0e-84 315.8 169 87.6
Sp7g36040 Schrenkiella parvula HOM05D003509 ORTHO05D004205 2.0e-84 315.8 169 88.8
Lj6g0023245 Lotus japonicus HOM05D003509 ORTHO05D004205 2.6e-84 315.5 169 87.0
Rhsim10G0162600 Rhododendron simsii HOM05D003509 ORTHO05D004205 2.6e-84 315.5 181 84.5
VMungo0251G2994 Vigna mungo HOM05D003509 ORTHO05D004205 2.6e-84 315.5 169 86.4
C03p78380 Brassica napus HOM05D003509 ORTHO05D004205 3.4e-84 315.1 169 87.6
BolC3t20097H Brassica oleracea HOM05D003509 ORTHO05D004205 3.4e-84 315.1 169 87.6
Glyma.18G017600 Glycine max HOM05D003509 ORTHO05D004205 3.4e-84 315.1 169 87.6
SalBow5G0975 Salvia bowleyana HOM05D003509 ORTHO05D004205 3.4e-84 315.1 169 87.6
SalBow5G3202 Salvia bowleyana HOM05D003509 ORTHO05D004205 3.4e-84 315.1 169 87.6
Nitab4.5_0000104g0130 Nicotiana tabacum HOM05D003509 ORTHO05D004205 4.5e-84 314.7 169 87.6
Nitab4.5_0006517g0010 Nicotiana tabacum HOM05D003509 ORTHO05D004205 4.5e-84 314.7 169 87.6
Phvul.001G251800 Phaseolus vulgaris HOM05D003509 ORTHO05D004205 4.5e-84 314.7 169 87.0
Glyma.11G239800 Glycine max HOM05D003509 ORTHO05D004205 7.6e-84 313.9 169 87.0
RcHm_v2.0_Chr3g0484971 Rosa chinensis HOM05D003509 ORTHO05D004205 7.6e-84 313.9 169 87.0
BcaNung03401 Brassica carinata HOM05D003509 ORTHO05D004205 9.9e-84 313.5 169 88.2
C07p62850 Brassica napus HOM05D003509 ORTHO05D004205 9.9e-84 313.5 169 88.2
BolC7t46697H Brassica oleracea HOM05D003509 ORTHO05D004205 9.9e-84 313.5 169 88.2
BcaNung02306 Brassica carinata HOM05D003509 ORTHO05D004205 1.3e-83 313.2 169 88.2
PSO017G5498 Papaver somniferum HOM05D003509 ORTHO05D004205 1.3e-83 313.2 169 87.0
PSO170G3704 Papaver somniferum HOM05D003509 ORTHO05D004205 1.3e-83 313.2 169 87.0
SGA_v2.0_scaffold47G17784 Striga asiatica HOM05D003509 ORTHO05D004205 1.3e-83 313.2 169 85.8
CAN.G441.2 Capsicum annuum HOM05D003509 ORTHO05D004205 1.7e-83 312.8 169 88.8
Cfa002672 Carpinus fangiana HOM05D003509 ORTHO05D004205 1.7e-83 312.8 169 86.4
Potri.007G092200 Populus trichocarpa HOM05D003509 ORTHO05D004205 1.7e-83 312.8 172 84.9
AL7G12080 Arabidopsis lyrata HOM05D003509 ORTHO05D004205 2.9e-83 312.0 169 87.6
AT4G39850 Arabidopsis thaliana HOM05D003509 ORTHO05D004205 2.9e-83 312.0 169 87.6
HanXRQChr03g0087081 Helianthus annuus HOM05D003509 ORTHO05D004205 2.9e-83 312.0 169 87.0
Lsat_1_v5_gn_8_1020 Lactuca sativa HOM05D003509 ORTHO05D004205 2.9e-83 312.0 169 86.4
Phvul.002G255500 Phaseolus vulgaris HOM05D003509 ORTHO05D004205 2.9e-83 312.0 169 85.2
Aqoxy1G03668 Aquilegia oxysepala HOM05D003509 ORTHO05D004205 3.8e-83 311.6 169 87.0
Psat5g089680 Pisum sativum HOM05D003509 ORTHO05D004205 8.4e-83 310.5 169 86.4
Peaxi162Scf00212g01215 Petunia axillaris HOM05D003509 ORTHO05D004205 1.1e-82 310.1 169 85.8
Solyc04g055120.3 Solanum lycopersicum HOM05D003509 ORTHO05D004205 3.2e-82 308.5 169 87.6
Sopen04g024980 Solanum pennellii HOM05D003509 ORTHO05D004205 3.2e-82 308.5 169 87.6
HPP92_016104 Vanilla planifolia HOM05D003509 ORTHO05D004205 2.1e-81 305.8 169 83.4
arahy.Tifrunner.gnm1.ann1.X4FXIQ Arachis hypogaea HOM05D003509 ORTHO05D004205 2.7e-81 305.4 169 84.0
arahy.Tifrunner.gnm1.ann1.41RR18 Arachis hypogaea HOM05D003509 ORTHO05D004205 1.3e-80 303.1 169 83.4
Migut.H01170 Erythranthe guttata HOM05D003509 ORTHO05D004205 2.3e-80 302.4 164 86.0
MSTRG.3782 Avicennia marina HOM05D003509 ORTHO05D004205 3.9e-80 301.6 169 84.6
ATR0763G048 Amborella trichopoda HOM05D003509 ORTHO05D004205 8.7e-80 300.4 169 82.8
ClCG10G008740 Citrullus lanatus HOM05D003509 ORTHO05D004205 8.7e-80 300.4 169 82.8
MELO3C018990.2 Cucumis melo HOM05D003509 ORTHO05D004205 2.5e-79 298.9 169 82.8
Gohir.A02G143400 Gossypium hirsutum HOM05D003509 ORTHO05D004205 7.4e-79 297.4 169 81.7
CsaV3_4G008940 Cucumis sativus L. HOM05D003509 ORTHO05D004205 9.6e-79 297.0 169 81.7
Gohir.D03G037100 Gossypium hirsutum HOM05D003509 ORTHO05D004205 9.6e-79 297.0 169 81.7
Gorai.003G038900 Gossypium raimondii HOM05D003509 ORTHO05D004205 1.6e-78 296.2 169 81.7
CDE04G0016 Ceratophyllum demersum HOM05D003509 ORTHO05D004205 2.8e-78 295.4 169 81.7
Sed0020843 Sechium edule HOM05D003509 ORTHO05D004205 3.7e-78 295.0 169 80.5
Zm00001eb140100 Zea mays HOM05D003509 ORTHO05D004205 6.9e-77 290.8 169 78.1
EL10As8g23855 Beta vulgaris HOM05D003509 ORTHO05D004205 2.2e-75 285.8 153 89.5
SEGI_14643 Sequoiadendron giganteum HOM05D003509 ORTHO05D004205 1.4e-74 283.1 169 77.5
Lalb_Chr08g0231101 Lupinus albus HOM05D003509 ORTHO05D004205 5.5e-74 281.2 169 76.9
Zm00001eb356090 Zea mays HOM05D003509 ORTHO05D004205 5.5e-74 281.2 169 76.9
Os05g0107600 Oryza sativa ssp. japonica HOM05D003509 ORTHO05D004205 1.0e-72 276.9 169 75.7
SMO351G0412 Selaginella moellendorffii HOM05D003509 ORTHO05D004205 5.9e-68 261.2 169 72.2
Pp3c14_6330 Physcomitrium patens HOM05D003509 ORTHO05D004205 3.8e-67 258.5 169 72.8
Mapoly0144s0028 Marchantia polymorpha HOM05D003509 ORTHO05D004205 3.2e-66 255.4 169 72.2
AagrBONN_evm.TU.Sc2ySwM_344.2362 Anthoceros agrestis HOM05D003509 ORTHO05D004205 7.2e-58 227.6 169 64.5
arahy.Tifrunner.gnm1.ann1.S5WRJR Arachis hypogaea HOM05D003509 ORTHO05D004205 3.9e-56 221.9 130 80.0
arahy.Tifrunner.gnm1.ann1.DC8DPX Arachis hypogaea HOM05D003509 ORTHO05D004205 1.8e-45 186.4 101 85.1
ECA233G1869 Erigeron canadensis HOM05D003509 ORTHO05D004205 1.1e-42 177.2 93 90.3
arahy.Tifrunner.gnm1.ann1.LC8K5G Arachis hypogaea HOM05D003509 ORTHO05D004205 3.2e-42 175.6 130 66.9
Actinidia25645 Actinidia chinensis HOM05D003509 ORTHO05D004205 3.0e-40 169.1 83 92.8
arahy.Tifrunner.gnm1.ann1.E07S37 Arachis hypogaea HOM05D003509 ORTHO05D001340 1.5e-34 150.2 82 85.4
Psat0s626g0080 Pisum sativum HOM05D003509 ORTHO05D004205 2.4e-29 132.9 116 60.3
Actinidia06565 Actinidia chinensis HOM05D003509 ORTHO05D004205 1.3e-27 127.1 160 40.6
Cpa.g.sc213.16 Carica papaya HOM05D003509 ORTHO05D004205 2.3e-27 126.3 154 40.9
ECA233G3468 Erigeron canadensis HOM05D003509 ORTHO05D004205 5.0e-27 125.2 154 39.0
unitig_899.g15007 Utricularia gibba HOM05D003509 ORTHO05D004205 8.6e-27 124.4 69 78.3
Zm00001eb301970 Zea mays HOM05D003509 ORTHO05D004205 2.5e-26 122.9 76 72.4
Hma1.2p1_0308F.1_g120170 Hydrangea macrophylla HOM05D003509 ORTHO05D004205 1.2e-25 120.6 154 39.0
SEGI_16561 Sequoiadendron giganteum HOM05D003509 ORTHO05D004205 3.6e-25 119.0 154 39.6
Lsat_1_v5_gn_3_4241 Lactuca sativa HOM05D003509 ORTHO05D014827 2.0e-23 113.2 167 35.3
Pp3c17_11810 Physcomitrium patens HOM05D003509 ORTHO05D004205 2.2e-22 109.8 169 38.5
Cfa025414 Carpinus fangiana HOM05D003509 ORTHO05D004205 8.3e-22 107.8 169 30.8
Lalb_Chr08g0231091 Lupinus albus HOM05D003509 ORTHO05D004205 1.4e-21 107.1 147 36.7
Cfa023170 Carpinus fangiana HOM05D003509 ORTHO05D004205 5.0e-19 98.6 170 32.4
ClCG10G008750 Citrullus lanatus HOM05D003509 ORTHO05D004205 1.9e-18 96.7 108 43.5
Haze_26893 Corylus avellana HOM05D003509 ORTHO05D004205 2.8e-17 92.8 172 30.8
MCO02G363 Micromonas commoda HOM05D003509 ORTHO05D004205 1.4e-16 90.5 168 29.8
PRCOL_00003760 Prasinoderma coloniale HOM05D003509 ORTHO05D004205 2.0e-15 86.7 163 30.7
Psat0s626g0040 Pisum sativum HOM05D003509 ORTHO05D004205 1.8e-13 80.1 120 35.8
CSS0024265 Camellia sinensis var. sinensis HOM05D003509 ORTHO05D004205 2.0e-12 76.6 122 37.7
Lsat_1_v5_gn_5_23900 Lactuca sativa HOM05D003509 ORTHO05D004205 4.6e-12 75.5 110 37.3
Pp3c27_1790 Physcomitrium patens HOM05D003509 ORTHO05D004205 4.6e-12 75.5 169 28.4
Actinidia25646 Actinidia chinensis HOM05D003509 ORTHO05D004205 6.6e-11 71.6 36 83.3
MCO02G235 Micromonas commoda HOM05D003509 ORTHO05D004205 8.6e-11 71.2 168 28.6
ECA233G2957 Erigeron canadensis HOM05D003509 ORTHO05D004205 2.8e-09 66.2 59 49.2
Pp3c2_10620 Physcomitrium patens HOM05D000936 ORTHO05D005107 3.6e-09 65.9 169 27.2
SMO361G0711 Selaginella moellendorffii HOM05D000936 ORTHO05D005107 1.4e-08 63.9 144 29.2
SMO361G0694 Selaginella moellendorffii HOM05D000936 ORTHO05D005107 2.3e-08 63.2 135 29.6
AagrBONN_evm.TU.Sc2ySwM_368.639 Anthoceros agrestis HOM05D020452 ORTHO05D026690 3.1e-08 62.8 151 26.5
Mapoly0066s0022 Marchantia polymorpha HOM05D000936 ORTHO05D005107 4.0e-08 62.4 135 31.1
Lsat_1_v5_gn_4_101520 Lactuca sativa HOM05D003509 ORTHO05D004205 6.8e-08 61.6 57 47.4
Pp3c14_11150 Physcomitrium patens HOM05D000936 ORTHO05D005107 2.6e-07 59.7 140 29.3
CBR_g26493 Chara braunii HOM05D000936 ORTHO05D005107 2.9e-06 56.2 127 29.9
PRCOL_00001508 Prasinoderma coloniale HOM05D000936 ORTHO05D005107 3.7e-06 55.8 126 31.0
Pp3c6_11470 Physcomitrium patens HOM05D000936 ORTHO05D005107 4.9e-06 55.5 168 30.4
Sed0019803 Sechium edule HOM05D000936 ORTHO05D005107 4.9e-06 55.5 138 31.2
Lalb_Chr01g0015671 Lupinus albus HOM05D000936 ORTHO05D005107 6.4e-06 55.1 136 28.7
Ca_03315_v3 Cicer arietinum L. HOM05D000936 ORTHO05D005107 8.3e-06 54.7 137 32.1


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