Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G154600 Manihot esculenta HOM05D005810 ORTHO05D007279 0.0e+00 1102.4 559 100.0
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 2.0e-231 805.8 529 77.9
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 2.4e-224 782.3 500 78.0
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 1.1e-219 766.9 495 77.2
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 4.4e-218 761.5 494 77.3
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 5.4e-216 754.6 495 77.0
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 9.2e-216 753.8 495 77.0
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 1.3e-214 750.0 496 76.6
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 1.5e-213 746.5 497 76.1
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 6.2e-212 741.1 491 76.6
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 3.8e-209 731.9 489 74.6
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 1.4e-208 729.9 488 76.0
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 4.2e-208 728.4 492 75.2
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 4.2e-208 728.4 492 75.2
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 7.8e-207 724.2 492 74.8
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 1.3e-204 716.8 502 71.7
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 1.4e-203 713.4 503 70.6
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 3.1e-203 712.2 488 73.2
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 9.0e-203 710.7 494 72.1
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 1.5e-202 709.9 495 71.5
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 2.0e-202 709.5 494 72.1
Atru.chr2.784 Acer truncatum HOM05D005810 ORTHO05D007279 5.8e-202 708.0 444 79.5
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 4.9e-201 704.9 489 71.6
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 1.4e-200 703.4 531 68.2
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 1.4e-200 703.4 500 71.8
Sc09g0003830 Simmondsia chinensis HOM05D005810 ORTHO05D007279 5.4e-200 701.4 496 70.2
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 7.1e-200 701.0 494 71.9
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 6.0e-199 698.0 539 67.3
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 7.9e-199 697.6 493 70.8
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 7.9e-199 697.6 494 71.1
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 6.7e-198 694.5 489 72.2
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 2.5e-197 692.6 500 70.0
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 1.8e-195 686.4 491 71.7
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 1.8e-195 686.4 492 71.7
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 3.1e-195 685.6 504 70.4
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 3.1e-195 685.6 521 66.8
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 3.1e-195 685.6 478 71.1
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 4.0e-195 685.3 502 70.7
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 5.3e-195 684.9 525 66.5
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 9.0e-195 684.1 504 70.2
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 1.2e-194 683.7 498 69.3
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 1.5e-194 683.3 521 68.1
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 1.5e-194 683.3 496 69.8
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 3.4e-194 682.2 492 71.7
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 3.4e-194 682.2 495 69.9
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 4.5e-194 681.8 525 66.7
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 6.4e-193 677.9 507 69.6
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 1.4e-192 676.8 504 69.6
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 1.4e-192 676.8 504 69.6
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 1.4e-192 676.8 547 66.5
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 2.4e-192 676.0 500 68.4
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 1.6e-191 673.3 490 70.4
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 2.1e-191 672.9 482 69.7
Cc02_g31830 Coffea canephora HOM05D005810 ORTHO05D007279 7.9e-191 671.0 494 71.3
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 5.1e-190 668.3 532 65.2
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 3.3e-189 665.6 537 65.0
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 7.4e-189 664.5 515 68.2
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 1.6e-188 663.3 500 67.6
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 5.3e-187 658.3 538 64.3
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 6.9e-187 657.9 513 65.1
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 7.6e-186 654.4 497 67.6
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 1.0e-185 654.1 512 66.4
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 4.9e-185 651.7 503 67.0
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 8.4e-185 651.0 545 63.7
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 2.5e-181 639.4 524 63.5
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 3.7e-180 635.6 522 62.8
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 6.3e-180 634.8 491 67.4
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 6.3e-180 634.8 495 65.9
CsaV3_1G045590 Cucumis sativus L. HOM05D005810 ORTHO05D007279 2.4e-179 632.9 522 64.6
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 1.2e-178 630.6 502 66.1
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 1.5e-178 630.2 514 64.0
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 4.5e-178 628.6 521 63.7
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 2.9e-177 625.9 567 60.0
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 6.5e-177 624.8 516 64.0
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.9e-176 623.2 507 65.5
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 1.1e-173 614.0 431 71.9
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 1.7e-172 610.1 466 68.5
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 2.1e-167 593.2 490 63.9
Haze_04339 Corylus avellana HOM05D005810 ORTHO05D007279 6.1e-167 591.7 393 76.3
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 2.8e-164 582.8 508 62.6
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 1.0e-153 547.7 500 57.2
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 2.9e-145 519.6 447 61.7
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 5.7e-141 505.4 507 55.6
Solyc01g097600.2 Solanum lycopersicum HOM05D005810 ORTHO05D007279 6.3e-140 501.9 350 72.3
Sopen01g041230 Solanum pennellii HOM05D005810 ORTHO05D007279 2.4e-139 500.0 350 72.0
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 2.7e-138 496.5 488 55.7
FAN05G0700 Fragaria x ananassa HOM05D005810 ORTHO05D007279 6.6e-137 491.9 350 70.3
Zm00001eb352870 Zea mays HOM05D005810 ORTHO05D007279 1.9e-136 490.3 413 60.3
FAN14G4259 Fragaria x ananassa HOM05D005810 ORTHO05D007279 2.1e-135 486.9 350 69.4
FAN02G1150 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.0e-134 484.6 350 69.1
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 1.2e-133 481.1 474 51.7
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 3.4e-133 479.6 384 63.8
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 1.0e-129 468.0 495 50.1
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 9.5e-128 461.5 512 52.9
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 7.3e-120 435.3 503 46.9
Os05g0509300 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 2.2e-116 423.7 364 58.2
Dinv13659 Davidia involucrata HOM05D005810 ORTHO05D007279 6.6e-113 412.1 313 68.4
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 9.9e-101 371.7 296 66.2
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 3.0e-97 360.1 547 41.1
Os01g0773000 Oryza sativa ssp. japonica HOM05D005810 ORTHO05D007279 2.0e-93 347.4 322 59.0
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 2.6e-93 347.1 523 41.3
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 2.9e-92 343.6 291 62.2
AagrBONN_evm.TU.Sc2ySwM_362.2883 Anthoceros agrestis HOM05D005810 ORTHO05D007279 3.8e-92 343.2 341 53.7
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 2.4e-91 340.5 553 39.8
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 1.6e-90 337.8 501 44.5
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 2.1e-74 284.3 473 37.0
Nitab4.5_0005729g0080 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.8e-70 271.2 206 68.9
Nitab4.5_0005729g0060 Nicotiana tabacum HOM05D005810 ORTHO05D007279 3.0e-65 253.8 199 65.8
Zm00001eb281050 Zea mays HOM05D005810 ORTHO05D007279 1.9e-64 251.1 161 74.5
SGA_v2.0_scaffold92G28303 Striga asiatica HOM05D005810 ORTHO05D007279 4.1e-62 243.4 195 63.1
Zm00001eb054900 Zea mays HOM05D005810 ORTHO05D007279 6.5e-60 236.1 174 67.8
CsaV3_UNG004080 Cucumis sativus L. HOM05D005810 ORTHO05D007279 3.0e-57 227.3 227 55.5
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 1.1e-51 208.8 362 36.7
HPP92_018612 Vanilla planifolia HOM05D005810 ORTHO05D007279 6.1e-50 203.0 171 58.5
TPR.G21485 Trifolium pratense HOM05D005810 ORTHO05D007279 2.0e-48 198.0 166 62.7
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 4.0e-33 147.1 130 59.2
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 1.6e-29 135.2 106 63.2
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 1.3e-20 105.5 93 53.8
SHI07786 Sapria himalayana HOM05D005810 ORTHO05D007279 6.8e-17 93.2 58 75.9
MBI11_g02497_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 2.3e-12 78.2 81 55.6
Mapoly0081s0042 Marchantia polymorpha HOM05D005810 ORTHO05D007279 5.6e-11 73.6 51 60.8
Mapoly0027s0098 Marchantia polymorpha HOM05D005810 ORTHO05D007279 2.1e-10 71.6 76 47.4
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 5.8e-08 63.5 61 54.1


User provided reference genes

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