Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 1.3e-255 885.9 469 100.0
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.4e-132 477.2 477 55.3
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 2.2e-130 469.9 477 54.7
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 6.7e-127 458.4 426 62.0
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 2.2e-125 453.4 426 60.6
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 3.5e-123 446.0 419 63.5
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 1.9e-121 440.3 396 62.1
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 2.6e-118 429.9 404 58.2
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 2.8e-117 426.4 396 61.6
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 6.5e-114 415.2 428 50.7
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 1.2e-112 411.0 458 56.8
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 1.6e-112 410.6 403 58.6
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 4.7e-112 409.1 386 60.6
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 2.0e-110 403.7 458 54.1
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.4e-110 402.9 453 53.9
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 4.8e-109 399.1 368 58.2
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 3.1e-108 396.4 394 57.1
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 3.1e-108 396.4 444 51.6
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 3.1e-108 396.4 424 54.5
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 3.1e-108 396.4 430 52.8
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 1.6e-107 394.0 439 50.3
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 2.9e-106 389.8 418 49.5
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 3.8e-106 389.4 442 52.7
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 1.5e-105 387.5 397 55.9
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 5.5e-105 385.6 430 53.5
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 5.5e-105 385.6 418 53.6
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 7.2e-105 385.2 379 54.6
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 3.6e-104 382.9 473 48.8
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.7e-104 382.5 366 54.6
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 1.0e-103 381.3 442 51.6
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.0e-103 381.3 405 51.4
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.3e-103 380.2 405 51.1
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 3.0e-103 379.8 385 51.7
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 6.8e-103 378.6 405 51.1
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 6.8e-103 378.6 363 53.2
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 8.9e-103 378.3 383 50.9
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 1.5e-102 377.5 414 54.3
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 3.4e-102 376.3 488 50.8
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 2.2e-101 373.6 418 52.2
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.8e-101 373.2 403 54.1
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 1.8e-100 370.5 412 54.6
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 2.0e-99 367.1 423 52.5
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 2.7e-99 366.7 451 52.3
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 1.5e-97 360.9 390 51.3
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 1.9e-97 360.5 460 49.3
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 4.3e-97 359.4 398 53.0
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 2.1e-96 357.1 428 46.5
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 4.0e-95 352.8 351 50.4
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 1.5e-94 350.9 367 50.1
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 6.4e-93 345.5 395 49.9
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 6.4e-93 345.5 421 48.5
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 1.4e-92 344.4 358 49.2
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.4e-92 344.4 405 48.1
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 3.2e-92 343.2 372 51.1
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 5.4e-92 342.4 419 48.4
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 6.0e-91 339.0 476 41.8
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 1.7e-90 337.4 382 45.8
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 1.7e-90 337.4 380 51.1
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 5.0e-90 335.9 417 48.9
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 8.6e-90 335.1 434 49.1
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 1.8e-87 327.4 452 43.6
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 4.0e-87 326.2 438 41.3
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 6.8e-87 325.5 414 46.4
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 3.7e-85 319.7 416 47.1
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 1.1e-84 318.2 370 50.0
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.4e-84 317.8 414 47.1
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 1.9e-84 317.4 394 47.7
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 3.2e-84 316.6 410 46.8
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 6.0e-83 312.4 366 48.6
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 8.6e-82 308.5 394 48.5
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 1.6e-80 304.3 395 47.1
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 3.4e-78 296.6 434 40.6
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 7.6e-78 295.4 385 43.4
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 1.7e-77 294.3 400 46.0
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.1e-76 291.6 411 46.2
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 1.9e-76 290.8 398 42.2
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 2.5e-73 280.4 492 34.8
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 5.2e-71 272.7 308 52.3
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 8.9e-71 271.9 460 42.6
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 2.9e-69 266.9 340 45.3
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.9e-68 264.2 351 40.5
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 3.1e-63 246.9 396 39.4
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 3.1e-63 246.9 381 44.4
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 9.0e-63 245.4 246 52.8
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 9.0e-63 245.4 366 43.4
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 1.2e-62 245.0 382 37.7
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 5.4e-60 236.1 223 55.6
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 9.3e-60 235.3 315 42.2
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 1.0e-58 231.9 357 40.3
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 1.3e-58 231.5 361 36.3
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 5.1e-58 229.6 347 36.9
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 1.1e-57 228.4 397 33.8
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 1.1e-55 221.9 237 48.1
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 4.5e-54 216.5 301 49.5
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 5.8e-54 216.1 332 44.0
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 7.9e-51 205.7 360 34.2
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 2.3e-50 204.1 461 31.5
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 3.9e-50 203.4 182 57.1
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 1.1e-49 201.8 316 43.7
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 1.5e-46 191.4 181 53.0
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 3.4e-46 190.3 126 66.7
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 6.5e-45 186.0 155 56.1
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 2.1e-43 181.0 182 58.8
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 1.9e-36 157.9 148 53.4
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 2.5e-36 157.5 122 61.5
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 3.2e-36 157.1 115 60.9
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 1.3e-34 151.8 565 25.3
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 1.3e-34 151.8 147 55.1
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 1.9e-33 147.9 103 63.1
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 8.2e-32 142.5 101 57.4
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 1.1e-31 142.1 106 59.4
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 1.8e-31 141.4 100 62.0
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 1.2e-30 138.7 101 55.4
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 5.9e-30 136.3 102 59.8
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 1.7e-29 134.8 149 49.7
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 9.7e-25 119.0 100 55.0
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 1.3e-24 118.6 129 44.2
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 1.7e-24 118.2 87 58.6
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 2.8e-24 117.5 92 59.8
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 2.0e-22 111.3 98 55.1
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 1.7e-21 108.2 83 61.4
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.2e-21 107.8 81 55.6
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 6.5e-21 106.3 82 59.8
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 2.5e-20 104.4 92 58.7
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 4.2e-20 103.6 80 53.8
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 3.6e-19 100.5 62 66.1
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 4.7e-19 100.1 86 54.7
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 6.1e-19 99.8 85 55.3
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 2.3e-18 97.8 84 46.4
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 3.0e-18 97.4 417 24.5
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 3.0e-18 97.4 168 35.7
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 4.1e-15 87.0 75 48.0
Sabra10G0175900 Salix brachista HOM05D004644 ORTHO05D005700 5.9e-14 83.2 92 47.8
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 7.7e-14 82.8 65 50.8
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 1.0e-13 82.4 68 48.5
FvH4_7g08751 Fragaria vesca HOM05D004644 ORTHO05D005700 1.3e-13 82.0 86 44.2
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 3.8e-13 80.5 89 49.4
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.1e-12 79.0 73 45.2
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 5.5e-12 76.6 74 45.9
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 5.5e-12 76.6 74 45.9
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.0e-10 70.9 65 43.1
Lj3C988T3 Lonicera japonica HOM05D004644 ORTHO05D005700 5.7e-09 66.6 54 59.3
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.8e-08 64.3 106 30.2
ECA232G2196 Erigeron canadensis HOM05D004644 ORTHO05D005700 1.8e-07 61.6 56 46.4
Glyma.18G219501 Glycine max HOM05D000076 ORTHO05D005700 1.8e-07 61.6 60 55.0
AT5G03750 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 3.1e-07 60.8 45 55.6
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.1e-07 60.8 40 55.0
Lj1g0014168 Lotus japonicus HOM05D004644 ORTHO05D007522 4.1e-07 60.5 54 50.0
Glyma.07G162100 Glycine max HOM05D003568 ORTHO05D004104 1.2e-06 58.9 57 54.4
Lj3C988T4 Lonicera japonica HOM05D004644 ORTHO05D005700 2.7e-06 57.8 48 52.1
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 2.7e-06 57.8 101 28.7


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