Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G077600 Manihot esculenta HOM05D006010 ORTHO05D007381 1.1e-137 493.4 284 100.0
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 1.2e-54 217.6 288 53.1
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 6.0e-54 215.3 288 52.8
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 7.4e-52 208.4 291 49.5
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 9.6e-52 208.0 294 51.7
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 2.8e-51 206.5 224 57.1
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 3.6e-51 206.1 292 52.4
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 1.4e-50 204.1 284 48.6
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 2.0e-49 200.3 232 54.7
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 2.0e-49 200.3 284 47.2
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 4.5e-49 199.1 328 44.2
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.9e-47 193.7 288 46.9
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 4.2e-47 192.6 148 72.3
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 7.1e-47 191.8 213 61.0
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 7.1e-47 191.8 243 51.0
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 7.1e-47 191.8 272 48.9
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 1.6e-46 190.7 284 45.8
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 1.6e-46 190.7 284 46.1
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 2.1e-46 190.3 291 47.8
GSVIVG01016005001 Vitis vinifera HOM05D006010 ORTHO05D007381 4.6e-46 189.1 196 57.7
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 6.0e-46 188.7 358 41.6
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 1.8e-45 187.2 291 47.1
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 2.3e-45 186.8 285 47.0
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 2.3e-45 186.8 282 46.5
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 6.7e-45 185.3 284 45.8
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 1.1e-44 184.5 321 44.2
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 1.1e-44 184.5 246 49.2
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 4.3e-44 182.6 233 48.1
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 5.6e-44 182.2 230 53.5
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 5.6e-44 182.2 228 50.9
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 5.6e-44 182.2 220 53.6
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 1.3e-43 181.0 286 48.3
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 1.6e-43 180.6 256 50.0
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 3.7e-43 179.5 291 46.7
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 1.1e-42 177.9 227 56.8
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 1.1e-42 177.9 284 45.1
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.1e-42 177.9 230 53.0
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 1.1e-42 177.9 272 48.5
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 1.1e-42 177.9 233 49.8
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 3.1e-42 176.4 233 51.9
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 5.3e-42 175.6 287 46.3
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 6.9e-42 175.3 291 44.7
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 2.0e-41 173.7 272 47.4
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 2.0e-41 173.7 285 44.9
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 2.6e-41 173.3 289 47.8
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 7.6e-41 171.8 202 53.5
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.7e-40 170.6 298 44.6
Ca_05837_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 2.9e-40 169.9 184 59.2
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.1e-39 167.9 278 44.6
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 1.9e-39 167.2 286 45.1
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 3.2e-39 166.4 292 45.9
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 3.2e-39 166.4 222 48.2
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 7.1e-39 165.2 250 51.6
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 1.2e-38 164.5 229 50.7
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 1.2e-38 164.5 281 44.1
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 1.6e-38 164.1 293 43.3
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 3.5e-38 162.9 285 46.3
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 4.6e-38 162.5 256 44.5
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 5.1e-37 159.1 222 46.8
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 5.1e-37 159.1 284 41.2
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 1.1e-36 157.9 284 43.3
FAN25G0538 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.7e-36 155.6 137 66.4
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 8.2e-35 151.8 283 39.9
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 1.1e-34 151.4 279 42.3
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 1.8e-34 150.6 251 45.8
SHI30126 Sapria himalayana HOM05D006010 ORTHO05D007381 9.0e-34 148.3 156 58.3
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 5.9e-33 145.6 279 41.9
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 5.9e-33 145.6 185 49.2
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 1.0e-32 144.8 260 43.1
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 2.2e-32 143.7 201 52.2
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 2.2e-32 143.7 288 41.0
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 6.5e-32 142.1 284 39.8
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 6.5e-32 142.1 285 40.7
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 1.4e-31 141.0 221 46.2
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 4.2e-31 139.4 201 45.8
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 7.2e-31 138.7 143 57.3
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 7.9e-30 135.2 302 39.1
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 1.1e-28 131.3 282 38.7
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 5.7e-28 129.0 239 41.0
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 9.7e-28 128.3 271 36.2
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 1.3e-27 127.9 299 40.8
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 3.7e-27 126.3 226 40.7
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 4.8e-27 125.9 243 43.2
CSS0001849 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 8.2e-27 125.2 110 68.2
CSS0044569 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 8.2e-27 125.2 110 68.2
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 1.8e-26 124.0 180 46.7
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 2.0e-25 120.6 213 43.2
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 3.4e-25 119.8 255 40.8
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 4.5e-25 119.4 260 41.2
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 1.0e-24 118.2 264 40.2
Aqoxy3G00232 Aquilegia oxysepala HOM05D006010 ORTHO05D007381 2.2e-24 117.1 126 58.7
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 1.1e-23 114.8 280 37.1
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 7.2e-23 112.1 325 33.5
Lj2A517G40 Lonicera japonica HOM05D006010 ORTHO05D007381 1.2e-22 111.3 103 62.1
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 1.4e-21 107.8 143 53.1
Nitab4.5_0011135g0050 Nicotiana tabacum HOM05D006010 ORTHO05D007381 3.9e-21 106.3 133 48.9
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 4.3e-20 102.8 327 33.0
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 4.1e-18 96.3 299 37.5
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 9.1e-18 95.1 113 61.1
FAN21G0982 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.0e-17 94.0 142 43.7
Pp3c12_7630 Physcomitrium patens HOM05D006010 ORTHO05D007381 8.5e-16 88.6 138 40.6
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 1.4e-15 87.8 172 42.4
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 4.2e-15 86.3 171 42.7
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 1.2e-14 84.7 80 61.2
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 1.2e-14 84.7 167 39.5
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 2.1e-14 84.0 290 30.3
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 2.7e-14 83.6 149 38.9
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 2.7e-14 83.6 149 38.9
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 6.1e-14 82.4 179 38.5
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 6.1e-14 82.4 179 38.5
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 6.7e-13 79.0 170 41.2
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 4.4e-12 76.3 188 36.7
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 9.7e-12 75.1 166 38.0
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 9.7e-12 75.1 62 58.1
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 9.7e-12 75.1 62 58.1
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 1.1e-10 71.6 121 43.0
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 4.1e-10 69.7 101 43.6
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 4.1e-10 69.7 101 43.6
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 7.0e-10 68.9 204 35.8
TPR.G36575 Trifolium pratense HOM05D006010 ORTHO05D007381 5.0e-08 62.8 75 49.3
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 4.7e-06 56.2 182 30.2


User provided reference genes

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